data_5UIW # _model_server_result.job_id xviWbCe4c5A0V095yezIog _model_server_result.datetime_utc '2024-11-04 20:09:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uiw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1104}' # _entry.id 5UIW # _exptl.entry_id 5UIW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5UIW _cell.length_a 38.01 _cell.length_b 52.64 _cell.length_c 302.67 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UIW _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 20 1_555 A SG CYS 322 A CYS 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 103 A CYS 101 1_555 A SG CYS 180 A CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf3 B SG CYS 11 B CYS 10 1_555 B SG CYS 35 B CYS 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf4 B SG CYS 12 B CYS 11 1_555 B SG CYS 51 B CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? covale ? covale1 B C PCA 1 B PCA 0 1_555 B N GLY 2 B GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 A SG CYS 231 A CYS 1006 1_555 C ZN ZN . A ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc2 A SG CYS 234 A CYS 1009 1_555 C ZN ZN . A ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc3 A SG CYS 264 A CYS 1039 1_555 C ZN ZN . A ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc4 A SG CYS 267 A CYS 1042 1_555 C ZN ZN . A ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 290 n n C10 C9 OLC doub 291 n n C10 C11 OLC sing 292 n n C9 C8 OLC sing 293 n n C17 C16 OLC sing 294 z n C11 C12 OLC sing 295 n n C8 C7 OLC sing 296 n n C24 C22 OLC sing 297 n n C24 O25 OLC sing 298 n n C16 C15 OLC sing 299 n n C12 C13 OLC sing 300 n n C7 C6 OLC sing 301 n n C15 C14 OLC sing 302 n n C13 C14 OLC sing 303 n n C6 C5 OLC sing 304 n n C5 C4 OLC sing 305 n n C4 C3 OLC sing 306 n n C3 C2 OLC sing 307 n n C2 C1 OLC sing 308 n n C21 C22 OLC sing 309 n n C21 O20 OLC sing 310 n n C1 O19 OLC doub 311 n n C1 O20 OLC sing 312 n n C22 O23 OLC sing 313 n n C18 H18 OLC sing 314 n n C18 H18A OLC sing 315 n n C18 H18B OLC sing 316 n n C10 H10 OLC sing 317 n n C9 H9 OLC sing 318 n n C17 H17 OLC sing 319 n n C17 H17A OLC sing 320 n n C11 H11 OLC sing 321 n n C11 H11A OLC sing 322 n n C8 H8 OLC sing 323 n n C8 H8A OLC sing 324 n n C24 H24 OLC sing 325 n n C24 H24A OLC sing 326 n n C16 H16 OLC sing 327 n n C16 H16A OLC sing 328 n n C12 H12 OLC sing 329 n n C12 H12A OLC sing 330 n n C7 H7 OLC sing 331 n n C7 H7A OLC sing 332 n n C15 H15 OLC sing 333 n n C15 H15A OLC sing 334 n n C13 H13 OLC sing 335 n n C13 H13A OLC sing 336 n n C6 H6 OLC sing 337 n n C6 H6A OLC sing 338 n n C14 H14 OLC sing 339 n n C14 H14A OLC sing 340 n n C5 H5 OLC sing 341 n n C5 H5A OLC sing 342 n n C4 H4 OLC sing 343 n n C4 H4A OLC sing 344 n n C3 H3 OLC sing 345 n n C3 H3A OLC sing 346 n n C2 H2 OLC sing 347 n n C2 H2A OLC sing 348 n n C21 H21 OLC sing 349 n n C21 H21A OLC sing 350 n n C22 H22 OLC sing 351 n n O25 HO25 OLC sing 352 n n O23 HO23 OLC sing 353 n n # _atom_sites.entry_id 5UIW _atom_sites.fract_transf_matrix[1][1] 0.026309 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018997 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003304 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 1101 1 ZN ZN . D 4 OLC A 1 1102 1 OLC OLC . E 4 OLC A 1 1103 2 OLC OLC . F 4 OLC A 1 1104 3 OLC OLC . G 4 OLC A 1 1105 4 OLC OLC . H 4 OLC A 1 1106 5 OLC OLC . I 4 OLC A 1 1107 6 OLC OLC . J 5 OLA A 1 1108 7 OLA OLA . K 5 OLA A 1 1109 8 OLA OLA . L 6 HOH A 1 1201 17 HOH HOH . L 6 HOH A 2 1202 1 HOH HOH . L 6 HOH A 3 1203 22 HOH HOH . L 6 HOH A 4 1204 34 HOH HOH . L 6 HOH A 5 1205 6 HOH HOH . L 6 HOH A 6 1206 20 HOH HOH . L 6 HOH A 7 1207 30 HOH HOH . L 6 HOH A 8 1208 18 HOH HOH . L 6 HOH A 9 1209 29 HOH HOH . L 6 HOH A 10 1210 33 HOH HOH . L 6 HOH A 11 1211 42 HOH HOH . L 6 HOH A 12 1212 38 HOH HOH . L 6 HOH A 13 1213 24 HOH HOH . L 6 HOH A 14 1214 3 HOH HOH . L 6 HOH A 15 1215 26 HOH HOH . L 6 HOH A 16 1216 8 HOH HOH . L 6 HOH A 17 1217 27 HOH HOH . L 6 HOH A 18 1218 39 HOH HOH . L 6 HOH A 19 1219 16 HOH HOH . L 6 HOH A 20 1220 14 HOH HOH . L 6 HOH A 21 1221 2 HOH HOH . L 6 HOH A 22 1222 41 HOH HOH . L 6 HOH A 23 1223 13 HOH HOH . L 6 HOH A 24 1224 37 HOH HOH . L 6 HOH A 25 1225 12 HOH HOH . L 6 HOH A 26 1226 9 HOH HOH . L 6 HOH A 27 1227 19 HOH HOH . L 6 HOH A 28 1228 11 HOH HOH . L 6 HOH A 29 1229 40 HOH HOH . L 6 HOH A 30 1230 32 HOH HOH . L 6 HOH A 31 1231 44 HOH HOH . L 6 HOH A 32 1232 23 HOH HOH . L 6 HOH A 33 1233 43 HOH HOH . L 6 HOH A 34 1234 28 HOH HOH . L 6 HOH A 35 1235 25 HOH HOH . L 6 HOH A 36 1236 31 HOH HOH . M 6 HOH B 1 101 35 HOH HOH . M 6 HOH B 2 102 10 HOH HOH . M 6 HOH B 3 103 4 HOH HOH . M 6 HOH B 4 104 15 HOH HOH . M 6 HOH B 5 105 7 HOH HOH . M 6 HOH B 6 106 36 HOH HOH . M 6 HOH B 7 107 5 HOH HOH . M 6 HOH B 8 108 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 OLC . . . F 4 -140.545 -115.047 639.76 1 65.35 ? C10 OLC 1104 A 1 HETATM 2 C C9 OLC . . . F 4 -141.013 -115.321 638.523 1 61.76 ? C9 OLC 1104 A 1 HETATM 3 C C11 OLC . . . F 4 -140.878 -113.742 640.454 1 66.75 ? C11 OLC 1104 A 1 HETATM 4 C C8 OLC . . . F 4 -141.883 -114.331 637.781 1 56.28 ? C8 OLC 1104 A 1 HETATM 5 C C24 OLC . . . F 4 -142.531 -113.475 624.62 1 64.61 ? C24 OLC 1104 A 1 HETATM 6 C C12 OLC . . . F 4 -140.003 -113.59 641.682 1 65.92 ? C12 OLC 1104 A 1 HETATM 7 C C7 OLC . . . F 4 -141.175 -113.93 636.506 1 50.36 ? C7 OLC 1104 A 1 HETATM 8 C C13 OLC . . . F 4 -140.407 -114.585 642.747 1 64.04 ? C13 OLC 1104 A 1 HETATM 9 C C6 OLC . . . F 4 -142.187 -113.671 635.414 1 46.14 ? C6 OLC 1104 A 1 HETATM 10 C C14 OLC . . . F 4 -139.69 -114.257 644.039 1 64.81 ? C14 OLC 1104 A 1 HETATM 11 C C5 OLC . . . F 4 -141.432 -113.503 634.118 1 45.11 ? C5 OLC 1104 A 1 HETATM 12 C C4 OLC . . . F 4 -142.387 -113.143 633 1 46.59 ? C4 OLC 1104 A 1 HETATM 13 C C3 OLC . . . F 4 -141.9 -113.8 631.724 1 49.73 ? C3 OLC 1104 A 1 HETATM 14 C C2 OLC . . . F 4 -142.363 -113.014 630.516 1 55.57 ? C2 OLC 1104 A 1 HETATM 15 C C21 OLC . . . F 4 -142.168 -113.132 627.051 1 59.67 ? C21 OLC 1104 A 1 HETATM 16 C C1 OLC . . . F 4 -142.344 -113.895 629.284 1 60.46 ? C1 OLC 1104 A 1 HETATM 17 C C22 OLC . . . F 4 -142.301 -114.158 625.95 1 62.2 ? C22 OLC 1104 A 1 HETATM 18 O O19 OLC . . . F 4 -141.747 -114.954 629.302 1 63.03 ? O19 OLC 1104 A 1 HETATM 19 O O25 OLC . . . F 4 -142.447 -114.42 623.573 1 65.49 ? O25 OLC 1104 A 1 HETATM 20 O O23 OLC . . . F 4 -141.112 -114.909 625.886 1 64.31 ? O23 OLC 1104 A 1 HETATM 21 O O20 OLC . . . F 4 -143.015 -113.493 628.115 1 61.22 ? O20 OLC 1104 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 21 #