data_5UJ7 # _model_server_result.job_id 09YU-7nHHtLHY63ThndBpw _model_server_result.datetime_utc '2025-04-28 03:28:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uj7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":902}' # _entry.id 5UJ7 # _exptl.entry_id 5UJ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.25 _cell.angle_gamma 90 _cell.entry_id 5UJ7 _cell.length_a 120.887 _cell.length_b 81.141 _cell.length_c 151.947 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UJ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L 1 1 D,E,F,M,N,O,P,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 J N N ? 5 N N N ? 5 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 150 A ASP 620 1_555 H MG MG . A MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc2 A OD2 ASP 150 A ASP 620 1_555 H MG MG . A MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc3 G O1B ATP . A ATP 900 1_555 H MG MG . A MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc4 B OG1 THR 74 C THR 74 1_555 J MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? metalc ? metalc5 I O3G ATP . C ATP 501 1_555 J MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc6 I O3B ATP . C ATP 501 1_555 J MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc7 C O PHE 22 E PHE 22 1_555 L K K . E K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? metalc ? metalc8 C O GLU 24 E GLU 24 1_555 L K K . E K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.017 ? metalc ? metalc9 C OG1 THR 119 E THR 119 1_555 L K K . E K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc10 C OH TYR 121 E TYR 121 1_555 L K K . E K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.243 ? metalc ? metalc11 D OG1 THR 71 B THR 541 1_555 N MG MG . B MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc12 D OD1 ASP 150 B ASP 620 1_555 N MG MG . B MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? metalc ? metalc13 D OD2 ASP 150 B ASP 620 1_555 N MG MG . B MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? metalc ? metalc14 M O2G ATP . B ATP 901 1_555 N MG MG . B MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc15 M O3B ATP . B ATP 901 1_555 N MG MG . B MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc16 E OG1 THR 74 D THR 74 1_555 P MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.882 ? metalc ? metalc17 O O3G ATP . D ATP 501 1_555 P MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.983 ? metalc ? metalc18 O O3B ATP . D ATP 501 1_555 P MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.835 ? metalc ? metalc19 F O PHE 22 F PHE 22 1_555 R K K . F K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc20 F O GLU 24 F GLU 24 1_555 R K K . F K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc21 F O HIS 27 F HIS 27 1_555 R K K . F K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.092 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5UJ7 _atom_sites.fract_transf_matrix[1][1] 0.008272 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001053 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012324 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006634 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 ATP A 1 900 900 ATP ATP . H 5 MG A 1 901 901 MG MG . I 4 ATP C 1 501 902 ATP ATP . J 5 MG C 1 502 903 MG MG . K 4 ATP E 1 301 904 ATP ATP . L 6 K E 1 302 905 K K . M 4 ATP B 1 901 906 ATP ATP . N 5 MG B 1 902 907 MG MG . O 4 ATP D 1 501 908 ATP ATP . P 5 MG D 1 502 909 MG MG . Q 4 ATP F 1 301 910 ATP ATP . R 6 K F 1 302 911 K K . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 5 _atom_site.Cartn_x 126.472 _atom_site.Cartn_y -13.353 _atom_site.Cartn_z -7.189 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 77.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 902 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #