data_5UJF # _model_server_result.job_id 6MlTn3RghSh-5vTGUO7NYg _model_server_result.datetime_utc '2024-11-23 16:00:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ujf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 5UJF # _exptl.entry_id 5UJF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 360.408 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5UJF _cell.length_a 59.49 _cell.length_b 59.49 _cell.length_c 102.67 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UJF _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -34.223333 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H24 N4 O4' _chem_comp.formula_weight 360.408 _chem_comp.id MMV _chem_comp.mon_nstd_flag . _chem_comp.name '3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N8 C3 MMV sing 246 n n C3 N4 MMV doub 247 n y C3 N2 MMV sing 248 n y N4 C5 MMV sing 249 n y N2 C1 MMV doub 250 n y C10 C9 MMV sing 251 n n C5 C9 MMV sing 252 n n C5 C6 MMV doub 253 n y O26 C24 MMV doub 254 n n O25 C24 MMV sing 255 n n C1 C6 MMV sing 256 n y C1 N7 MMV sing 257 n n C24 C23 MMV sing 258 n n C6 O11 MMV sing 259 n n C23 C22 MMV sing 260 n n O11 C12 MMV sing 261 n n C12 C13 MMV sing 262 n n C22 C17 MMV sing 263 n n C17 C18 MMV doub 264 n y C17 C16 MMV sing 265 n y C18 C19 MMV sing 266 n y O15 C16 MMV sing 267 n n O15 C14 MMV sing 268 n n C13 C14 MMV sing 269 n n C16 C21 MMV doub 270 n y C19 C20 MMV doub 271 n y C21 C20 MMV sing 272 n y N7 H1 MMV sing 273 n n N7 H2 MMV sing 274 n n N8 H3 MMV sing 275 n n N8 H4 MMV sing 276 n n C9 H5 MMV sing 277 n n C9 H6 MMV sing 278 n n C10 H7 MMV sing 279 n n C10 H8 MMV sing 280 n n C10 H9 MMV sing 281 n n C12 H10 MMV sing 282 n n C12 H11 MMV sing 283 n n C13 H12 MMV sing 284 n n C13 H13 MMV sing 285 n n C14 H14 MMV sing 286 n n C14 H15 MMV sing 287 n n C18 H16 MMV sing 288 n n C19 H17 MMV sing 289 n n C20 H18 MMV sing 290 n n C21 H19 MMV sing 291 n n C22 H20 MMV sing 292 n n C22 H21 MMV sing 293 n n C23 H22 MMV sing 294 n n C23 H23 MMV sing 295 n n O25 H24 MMV sing 296 n n # _atom_sites.entry_id 5UJF _atom_sites.fract_transf_matrix[1][1] 0.01681 _atom_sites.fract_transf_matrix[1][2] 0.009705 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00974 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 1 SO4 SO4 . C 2 SO4 A 1 202 2 SO4 SO4 . D 2 SO4 A 1 203 3 SO4 SO4 . E 3 EDO A 1 204 100 EDO EDO . F 4 MMV A 1 205 200 MMV 218 . G 5 HOH A 1 301 6 HOH HOH . G 5 HOH A 2 302 1 HOH HOH . G 5 HOH A 3 303 24 HOH HOH . G 5 HOH A 4 304 22 HOH HOH . G 5 HOH A 5 305 11 HOH HOH . G 5 HOH A 6 306 10 HOH HOH . G 5 HOH A 7 307 3 HOH HOH . G 5 HOH A 8 308 5 HOH HOH . G 5 HOH A 9 309 8 HOH HOH . G 5 HOH A 10 310 12 HOH HOH . G 5 HOH A 11 311 9 HOH HOH . G 5 HOH A 12 312 2 HOH HOH . G 5 HOH A 13 313 4 HOH HOH . G 5 HOH A 14 314 29 HOH HOH . G 5 HOH A 15 315 27 HOH HOH . G 5 HOH A 16 316 16 HOH HOH . G 5 HOH A 17 317 18 HOH HOH . G 5 HOH A 18 318 13 HOH HOH . G 5 HOH A 19 319 14 HOH HOH . G 5 HOH A 20 320 17 HOH HOH . G 5 HOH A 21 321 15 HOH HOH . G 5 HOH A 22 322 28 HOH HOH . G 5 HOH A 23 323 7 HOH HOH . G 5 HOH A 24 324 26 HOH HOH . G 5 HOH A 25 325 20 HOH HOH . G 5 HOH A 26 326 21 HOH HOH . G 5 HOH A 27 327 19 HOH HOH . G 5 HOH A 28 328 25 HOH HOH . G 5 HOH A 29 329 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MMV . . . F 4 23.798 -26.671 -5.482 1 32.31 ? C1 MMV 205 A 1 HETATM 2 N N2 MMV . . . F 4 24.583 -25.714 -6.02 1 36.12 ? N2 MMV 205 A 1 HETATM 3 C C3 MMV . . . F 4 24.831 -25.741 -7.351 1 34.88 ? C3 MMV 205 A 1 HETATM 4 N N4 MMV . . . F 4 24.311 -26.717 -8.14 1 38.18 ? N4 MMV 205 A 1 HETATM 5 C C5 MMV . . . F 4 23.522 -27.692 -7.639 1 38.76 ? C5 MMV 205 A 1 HETATM 6 C C6 MMV . . . F 4 23.257 -27.672 -6.282 1 41.14 ? C6 MMV 205 A 1 HETATM 7 N N7 MMV . . . F 4 23.495 -26.668 -4.038 1 33.69 ? N7 MMV 205 A 1 HETATM 8 N N8 MMV . . . F 4 25.692 -24.696 -7.949 1 34.64 ? N8 MMV 205 A 1 HETATM 9 C C9 MMV . . . F 4 22.938 -28.794 -8.519 1 36.29 ? C9 MMV 205 A 1 HETATM 10 C C10 MMV . . . F 4 24.004 -29.375 -9.419 1 31.09 ? C10 MMV 205 A 1 HETATM 11 O O11 MMV . . . F 4 22.476 -28.643 -5.723 1 32.66 ? O11 MMV 205 A 1 HETATM 12 C C12 MMV . . . F 4 23.144 -29.724 -5.057 1 36.52 ? C12 MMV 205 A 1 HETATM 13 C C13 MMV . . . F 4 22.118 -30.758 -4.607 1 45.73 ? C13 MMV 205 A 1 HETATM 14 C C14 MMV . . . F 4 21.341 -31.35 -5.786 1 45.47 ? C14 MMV 205 A 1 HETATM 15 O O15 MMV . . . F 4 22.234 -32.095 -6.614 1 42.01 ? O15 MMV 205 A 1 HETATM 16 C C16 MMV . . . F 4 21.778 -32.78 -7.712 1 42.92 ? C16 MMV 205 A 1 HETATM 17 C C17 MMV . . . F 4 22.677 -33.481 -8.492 1 38.65 ? C17 MMV 205 A 1 HETATM 18 C C18 MMV . . . F 4 22.24 -34.2 -9.6 1 40.78 ? C18 MMV 205 A 1 HETATM 19 C C19 MMV . . . F 4 20.891 -34.204 -9.936 1 45.16 ? C19 MMV 205 A 1 HETATM 20 C C20 MMV . . . F 4 19.985 -33.494 -9.153 1 48.95 ? C20 MMV 205 A 1 HETATM 21 C C21 MMV . . . F 4 20.427 -32.779 -8.039 1 42.72 ? C21 MMV 205 A 1 HETATM 22 C C22 MMV . . . F 4 24.139 -33.474 -8.121 1 41.36 ? C22 MMV 205 A 1 HETATM 23 C C23 MMV . . . F 4 24.724 -34.863 -8.343 1 50.71 ? C23 MMV 205 A 1 HETATM 24 C C24 MMV . . . F 4 26.2 -34.834 -8.039 1 60.65 ? C24 MMV 205 A 1 HETATM 25 O O25 MMV . . . F 4 26.688 -33.785 -7.576 1 61.41 ? O25 MMV 205 A 1 HETATM 26 O O26 MMV . . . F 4 26.878 -35.86 -8.259 1 68.09 ? O26 MMV 205 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 26 #