data_5UKM # _model_server_result.job_id teOyi3ToWQPNtERX0BD3sw _model_server_result.datetime_utc '2024-11-24 15:53:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ukm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":101}' # _entry.id 5UKM # _exptl.entry_id 5UKM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 135.185 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description O-METHYLCYSTEINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.46 _cell.angle_gamma 90 _cell.entry_id 5UKM _cell.length_a 189.012 _cell.length_b 74.15 _cell.length_c 123.175 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UKM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C PHE 67 G PHE 67 1_555 F N CMT . G CMT 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? metalc ? metalc1 A O HIS 348 A HIS 348 1_555 E MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc2 A O GLU 360 A GLU 360 1_555 E MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc3 A O GLN 363 A GLN 363 1_555 E MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc4 A O VAL 366 A VAL 366 1_555 E MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? # _chem_comp.formula 'C4 H9 N O2 S' _chem_comp.formula_weight 135.185 _chem_comp.id CMT _chem_comp.mon_nstd_flag n _chem_comp.name O-METHYLCYSTEINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA CMT sing 70 n n N H CMT sing 71 n n N H2 CMT sing 72 n n CA C CMT sing 73 n n CA CB CMT sing 74 n n CA HA CMT sing 75 n n C O CMT doub 76 n n C OXT CMT sing 77 n n CB SG CMT sing 78 n n CB HB2 CMT sing 79 n n CB HB3 CMT sing 80 n n SG HG CMT sing 81 n n OXT C1 CMT sing 82 n n C1 H11 CMT sing 83 n n C1 H12 CMT sing 84 n n C1 H13 CMT sing 85 n n # _atom_sites.entry_id 5UKM _atom_sites.fract_transf_matrix[1][1] 0.005291 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002519 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013486 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008992 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 T0E A 1 701 1 T0E T0E . E 5 MG A 1 702 1 MG MG . F 6 CMT G 1 101 68 CMT CMT . G 7 HOH A 1 801 3 HOH HOH . G 7 HOH A 2 802 16 HOH HOH . G 7 HOH A 3 803 4 HOH HOH . G 7 HOH A 4 804 2 HOH HOH . G 7 HOH A 5 805 5 HOH HOH . G 7 HOH A 6 806 17 HOH HOH . G 7 HOH A 7 807 21 HOH HOH . G 7 HOH A 8 808 7 HOH HOH . G 7 HOH A 9 809 6 HOH HOH . H 7 HOH B 1 401 22 HOH HOH . H 7 HOH B 2 402 9 HOH HOH . H 7 HOH B 3 403 26 HOH HOH . H 7 HOH B 4 404 15 HOH HOH . H 7 HOH B 5 405 14 HOH HOH . H 7 HOH B 6 406 8 HOH HOH . H 7 HOH B 7 407 24 HOH HOH . H 7 HOH B 8 408 23 HOH HOH . H 7 HOH B 9 409 12 HOH HOH . H 7 HOH B 10 410 11 HOH HOH . H 7 HOH B 11 411 25 HOH HOH . H 7 HOH B 12 412 13 HOH HOH . H 7 HOH B 13 413 18 HOH HOH . H 7 HOH B 14 414 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N CMT . . . F 6 -23.634 25.788 56.439 1 111.31 ? N CMT 101 G 1 HETATM 2 C CA CMT . . . F 6 -23.062 26.781 55.535 1 115.18 ? CA CMT 101 G 1 HETATM 3 C C CMT . . . F 6 -21.725 26.349 54.984 1 114.19 ? C CMT 101 G 1 HETATM 4 O O CMT . . . F 6 -21.141 27.143 54.269 1 113.83 ? O CMT 101 G 1 HETATM 5 C CB CMT . . . F 6 -22.891 28.121 56.264 1 119.08 ? CB CMT 101 G 1 HETATM 6 S SG CMT . . . F 6 -24.332 28.576 57.271 1 126.5 ? SG CMT 101 G 1 HETATM 7 O OXT CMT . . . F 6 -21.112 25.027 55.246 1 114.31 ? OXT CMT 101 G 1 HETATM 8 C C1 CMT . . . F 6 -20.535 24.604 56.506 1 113.05 ? C1 CMT 101 G 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 214 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #