data_5UL0 # _model_server_result.job_id CLdIjYWoEEtud4q4Nays1w _model_server_result.datetime_utc '2024-11-26 15:39:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ul0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 5UL0 # _exptl.entry_id 5UL0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.45 _cell.angle_gamma 90 _cell.entry_id 5UL0 _cell.length_a 78.8 _cell.length_b 67.14 _cell.length_c 81.43 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UL0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 464 A CYS 470 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C NAG VT1 . A VT1 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 5UL0 _atom_sites.fract_transf_matrix[1][1] 0.01269 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002112 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014894 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012449 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 601 HEM HEM . C 3 VT1 A 1 602 1 VT1 VT1 . D 4 1PE A 1 603 604 1PE 1PE . E 5 HOH A 1 701 123 HOH HOH . E 5 HOH A 2 702 53 HOH HOH . E 5 HOH A 3 703 41 HOH HOH . E 5 HOH A 4 704 140 HOH HOH . E 5 HOH A 5 705 110 HOH HOH . E 5 HOH A 6 706 28 HOH HOH . E 5 HOH A 7 707 7 HOH HOH . E 5 HOH A 8 708 52 HOH HOH . E 5 HOH A 9 709 182 HOH HOH . E 5 HOH A 10 710 24 HOH HOH . E 5 HOH A 11 711 29 HOH HOH . E 5 HOH A 12 712 71 HOH HOH . E 5 HOH A 13 713 10 HOH HOH . E 5 HOH A 14 714 111 HOH HOH . E 5 HOH A 15 715 78 HOH HOH . E 5 HOH A 16 716 85 HOH HOH . E 5 HOH A 17 717 107 HOH HOH . E 5 HOH A 18 718 37 HOH HOH . E 5 HOH A 19 719 183 HOH HOH . E 5 HOH A 20 720 75 HOH HOH . E 5 HOH A 21 721 11 HOH HOH . E 5 HOH A 22 722 55 HOH HOH . E 5 HOH A 23 723 76 HOH HOH . E 5 HOH A 24 724 94 HOH HOH . E 5 HOH A 25 725 83 HOH HOH . E 5 HOH A 26 726 33 HOH HOH . E 5 HOH A 27 727 20 HOH HOH . E 5 HOH A 28 728 66 HOH HOH . E 5 HOH A 29 729 5 HOH HOH . E 5 HOH A 30 730 17 HOH HOH . E 5 HOH A 31 731 60 HOH HOH . E 5 HOH A 32 732 38 HOH HOH . E 5 HOH A 33 733 187 HOH HOH . E 5 HOH A 34 734 99 HOH HOH . E 5 HOH A 35 735 1 HOH HOH . E 5 HOH A 36 736 54 HOH HOH . E 5 HOH A 37 737 48 HOH HOH . E 5 HOH A 38 738 3 HOH HOH . E 5 HOH A 39 739 63 HOH HOH . E 5 HOH A 40 740 30 HOH HOH . E 5 HOH A 41 741 19 HOH HOH . E 5 HOH A 42 742 145 HOH HOH . E 5 HOH A 43 743 69 HOH HOH . E 5 HOH A 44 744 146 HOH HOH . E 5 HOH A 45 745 120 HOH HOH . E 5 HOH A 46 746 16 HOH HOH . E 5 HOH A 47 747 166 HOH HOH . E 5 HOH A 48 748 43 HOH HOH . E 5 HOH A 49 749 14 HOH HOH . E 5 HOH A 50 750 105 HOH HOH . E 5 HOH A 51 751 155 HOH HOH . E 5 HOH A 52 752 9 HOH HOH . E 5 HOH A 53 753 139 HOH HOH . E 5 HOH A 54 754 112 HOH HOH . E 5 HOH A 55 755 156 HOH HOH . E 5 HOH A 56 756 127 HOH HOH . E 5 HOH A 57 757 64 HOH HOH . E 5 HOH A 58 758 100 HOH HOH . E 5 HOH A 59 759 72 HOH HOH . E 5 HOH A 60 760 108 HOH HOH . E 5 HOH A 61 761 92 HOH HOH . E 5 HOH A 62 762 58 HOH HOH . E 5 HOH A 63 763 70 HOH HOH . E 5 HOH A 64 764 68 HOH HOH . E 5 HOH A 65 765 160 HOH HOH . E 5 HOH A 66 766 141 HOH HOH . E 5 HOH A 67 767 186 HOH HOH . E 5 HOH A 68 768 86 HOH HOH . E 5 HOH A 69 769 25 HOH HOH . E 5 HOH A 70 770 4 HOH HOH . E 5 HOH A 71 771 46 HOH HOH . E 5 HOH A 72 772 80 HOH HOH . E 5 HOH A 73 773 8 HOH HOH . E 5 HOH A 74 774 89 HOH HOH . E 5 HOH A 75 775 93 HOH HOH . E 5 HOH A 76 776 35 HOH HOH . E 5 HOH A 77 777 15 HOH HOH . E 5 HOH A 78 778 65 HOH HOH . E 5 HOH A 79 779 34 HOH HOH . E 5 HOH A 80 780 36 HOH HOH . E 5 HOH A 81 781 56 HOH HOH . E 5 HOH A 82 782 31 HOH HOH . E 5 HOH A 83 783 57 HOH HOH . E 5 HOH A 84 784 136 HOH HOH . E 5 HOH A 85 785 116 HOH HOH . E 5 HOH A 86 786 143 HOH HOH . E 5 HOH A 87 787 74 HOH HOH . E 5 HOH A 88 788 147 HOH HOH . E 5 HOH A 89 789 148 HOH HOH . E 5 HOH A 90 790 44 HOH HOH . E 5 HOH A 91 791 171 HOH HOH . E 5 HOH A 92 792 42 HOH HOH . E 5 HOH A 93 793 2 HOH HOH . E 5 HOH A 94 794 67 HOH HOH . E 5 HOH A 95 795 81 HOH HOH . E 5 HOH A 96 796 106 HOH HOH . E 5 HOH A 97 797 39 HOH HOH . E 5 HOH A 98 798 87 HOH HOH . E 5 HOH A 99 799 18 HOH HOH . E 5 HOH A 100 800 113 HOH HOH . E 5 HOH A 101 801 27 HOH HOH . E 5 HOH A 102 802 47 HOH HOH . E 5 HOH A 103 803 104 HOH HOH . E 5 HOH A 104 804 26 HOH HOH . E 5 HOH A 105 805 22 HOH HOH . E 5 HOH A 106 806 6 HOH HOH . E 5 HOH A 107 807 12 HOH HOH . E 5 HOH A 108 808 23 HOH HOH . E 5 HOH A 109 809 90 HOH HOH . E 5 HOH A 110 810 102 HOH HOH . E 5 HOH A 111 811 50 HOH HOH . E 5 HOH A 112 812 59 HOH HOH . E 5 HOH A 113 813 51 HOH HOH . E 5 HOH A 114 814 125 HOH HOH . E 5 HOH A 115 815 13 HOH HOH . E 5 HOH A 116 816 61 HOH HOH . E 5 HOH A 117 817 161 HOH HOH . E 5 HOH A 118 818 163 HOH HOH . E 5 HOH A 119 819 32 HOH HOH . E 5 HOH A 120 820 132 HOH HOH . E 5 HOH A 121 821 40 HOH HOH . E 5 HOH A 122 822 73 HOH HOH . E 5 HOH A 123 823 168 HOH HOH . E 5 HOH A 124 824 167 HOH HOH . E 5 HOH A 125 825 91 HOH HOH . E 5 HOH A 126 826 138 HOH HOH . E 5 HOH A 127 827 118 HOH HOH . E 5 HOH A 128 828 158 HOH HOH . E 5 HOH A 129 829 21 HOH HOH . E 5 HOH A 130 830 88 HOH HOH . E 5 HOH A 131 831 114 HOH HOH . E 5 HOH A 132 832 126 HOH HOH . E 5 HOH A 133 833 165 HOH HOH . E 5 HOH A 134 834 79 HOH HOH . E 5 HOH A 135 835 117 HOH HOH . E 5 HOH A 136 836 121 HOH HOH . E 5 HOH A 137 837 137 HOH HOH . E 5 HOH A 138 838 62 HOH HOH . E 5 HOH A 139 839 185 HOH HOH . E 5 HOH A 140 840 49 HOH HOH . E 5 HOH A 141 841 103 HOH HOH . E 5 HOH A 142 842 135 HOH HOH . E 5 HOH A 143 843 124 HOH HOH . E 5 HOH A 144 844 151 HOH HOH . E 5 HOH A 145 845 188 HOH HOH . E 5 HOH A 146 846 84 HOH HOH . E 5 HOH A 147 847 122 HOH HOH . E 5 HOH A 148 848 177 HOH HOH . E 5 HOH A 149 849 184 HOH HOH . E 5 HOH A 150 850 181 HOH HOH . E 5 HOH A 151 851 170 HOH HOH . E 5 HOH A 152 852 159 HOH HOH . E 5 HOH A 153 853 97 HOH HOH . E 5 HOH A 154 854 133 HOH HOH . E 5 HOH A 155 855 164 HOH HOH . E 5 HOH A 156 856 119 HOH HOH . E 5 HOH A 157 857 152 HOH HOH . E 5 HOH A 158 858 131 HOH HOH . E 5 HOH A 159 859 162 HOH HOH . E 5 HOH A 160 860 153 HOH HOH . E 5 HOH A 161 861 129 HOH HOH . E 5 HOH A 162 862 77 HOH HOH . E 5 HOH A 163 863 115 HOH HOH . E 5 HOH A 164 864 149 HOH HOH . E 5 HOH A 165 865 179 HOH HOH . E 5 HOH A 166 866 172 HOH HOH . E 5 HOH A 167 867 154 HOH HOH . E 5 HOH A 168 868 96 HOH HOH . E 5 HOH A 169 869 128 HOH HOH . E 5 HOH A 170 870 173 HOH HOH . E 5 HOH A 171 871 144 HOH HOH . E 5 HOH A 172 872 176 HOH HOH . E 5 HOH A 173 873 98 HOH HOH . E 5 HOH A 174 874 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . D 4 29.608 28.295 -3.623 1 57.04 ? OH2 1PE 603 A 1 HETATM 2 C C12 1PE . . . D 4 29.54 26.982 -4.204 1 55.83 ? C12 1PE 603 A 1 HETATM 3 C C22 1PE . . . D 4 30.904 26.476 -4.699 1 54.4 ? C22 1PE 603 A 1 HETATM 4 O OH3 1PE . . . D 4 31.988 26.909 -3.86 1 57.86 ? OH3 1PE 603 A 1 HETATM 5 C C13 1PE . . . D 4 34.384 26.469 -3.429 1 55.91 ? C13 1PE 603 A 1 HETATM 6 C C23 1PE . . . D 4 32.98 25.894 -3.642 1 52.62 ? C23 1PE 603 A 1 HETATM 7 O OH4 1PE . . . D 4 34.401 27.614 -2.564 1 62.3 ? OH4 1PE 603 A 1 HETATM 8 C C14 1PE . . . D 4 35.763 29.593 -2.069 1 64.68 ? C14 1PE 603 A 1 HETATM 9 C C24 1PE . . . D 4 35.728 28.07 -2.262 1 57.84 ? C24 1PE 603 A 1 HETATM 10 O OH5 1PE . . . D 4 35.587 29.981 -0.695 1 68.37 ? OH5 1PE 603 A 1 HETATM 11 C C15 1PE . . . D 4 33.766 31.509 -0.262 1 61.61 ? C15 1PE 603 A 1 HETATM 12 C C25 1PE . . . D 4 35.266 31.365 -0.54 1 59.71 ? C25 1PE 603 A 1 HETATM 13 O OH6 1PE . . . D 4 33.037 31.803 -1.466 1 64.41 ? OH6 1PE 603 A 1 HETATM 14 C C16 1PE . . . D 4 30.851 31.634 -2.543 1 63.99 ? C16 1PE 603 A 1 HETATM 15 C C26 1PE . . . D 4 31.624 31.982 -1.265 1 60.72 ? C26 1PE 603 A 1 HETATM 16 O OH7 1PE . . . D 4 29.454 31.435 -2.277 1 58.24 ? OH7 1PE 603 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 16 #