data_5UL1 # _model_server_result.job_id MB48E0WsUaskOfvK7zZJ8g _model_server_result.datetime_utc '2024-11-22 07:48:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ul1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1101}' # _entry.id 5UL1 # _exptl.entry_id 5UL1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 439.531 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-amino-6-(4-{[(2S)-1-(dimethylamino)propan-2-yl]sulfonyl}phenyl)-N-phenylpyrazine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5UL1 _cell.length_a 100.431 _cell.length_b 108.814 _cell.length_c 136.576 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UL1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H25 N5 O3 S' _chem_comp.formula_weight 439.531 _chem_comp.id 8DY _chem_comp.mon_nstd_flag . _chem_comp.name 3-amino-6-(4-{[(2S)-1-(dimethylamino)propan-2-yl]sulfonyl}phenyl)-N-phenylpyrazine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C20 8DY doub 1 n y C19 C18 8DY sing 2 n y C20 C21 8DY sing 3 n y C18 C17 8DY doub 4 n y C21 C16 8DY doub 5 n y C17 C16 8DY sing 6 n y C16 N4 8DY sing 7 n n N4 C15 8DY sing 8 n n O2 C15 8DY doub 9 n n C15 C14 8DY sing 10 n n C14 N3 8DY doub 11 n y C14 C13 8DY sing 12 n y N3 C11 8DY sing 13 n y N2 C13 8DY sing 14 n n C13 N1 8DY doub 15 n y C9 C10 8DY doub 16 n y C9 C8 8DY sing 17 n y C11 C8 8DY sing 18 n n C11 C12 8DY doub 19 n y C10 C5 8DY sing 20 n y N1 C12 8DY sing 21 n y C8 C7 8DY doub 22 n y O1 S 8DY doub 23 n n C5 S 8DY sing 24 n n C5 C6 8DY doub 25 n y C7 C6 8DY sing 26 n y C4 N 8DY sing 27 n n S O 8DY doub 28 n n S C1 8DY sing 29 n n C2 C1 8DY sing 30 n n C2 N 8DY sing 31 n n C1 C 8DY sing 32 n n N C3 8DY sing 33 n n C1 H1 8DY sing 34 n n C2 H2 8DY sing 35 n n C2 H3 8DY sing 36 n n C3 H4 8DY sing 37 n n C3 H5 8DY sing 38 n n C3 H6 8DY sing 39 n n C12 H7 8DY sing 40 n n C17 H8 8DY sing 41 n n C18 H9 8DY sing 42 n n C19 H10 8DY sing 43 n n C20 H11 8DY sing 44 n n C21 H12 8DY sing 45 n n C H14 8DY sing 46 n n C H15 8DY sing 47 n n C H16 8DY sing 48 n n C10 H17 8DY sing 49 n n C4 H18 8DY sing 50 n n C4 H19 8DY sing 51 n n C4 H20 8DY sing 52 n n C6 H21 8DY sing 53 n n C7 H22 8DY sing 54 n n C9 H23 8DY sing 55 n n N2 H24 8DY sing 56 n n N2 H25 8DY sing 57 n n N4 H26 8DY sing 58 n n # _atom_sites.entry_id 5UL1 _atom_sites.fract_transf_matrix[1][1] 0.009957 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00919 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007322 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 8DY A 1 1101 1 8DY LI1 . D 4 HOH A 1 1201 64 HOH HOH . D 4 HOH A 2 1202 101 HOH HOH . D 4 HOH A 3 1203 89 HOH HOH . D 4 HOH A 4 1204 19 HOH HOH . D 4 HOH A 5 1205 12 HOH HOH . D 4 HOH A 6 1206 52 HOH HOH . D 4 HOH A 7 1207 65 HOH HOH . D 4 HOH A 8 1208 155 HOH HOH . D 4 HOH A 9 1209 55 HOH HOH . D 4 HOH A 10 1210 130 HOH HOH . D 4 HOH A 11 1211 159 HOH HOH . D 4 HOH A 12 1212 144 HOH HOH . D 4 HOH A 13 1213 124 HOH HOH . D 4 HOH A 14 1214 127 HOH HOH . D 4 HOH A 15 1215 36 HOH HOH . D 4 HOH A 16 1216 157 HOH HOH . D 4 HOH A 17 1217 136 HOH HOH . D 4 HOH A 18 1218 54 HOH HOH . D 4 HOH A 19 1219 30 HOH HOH . D 4 HOH A 20 1220 156 HOH HOH . D 4 HOH A 21 1221 116 HOH HOH . D 4 HOH A 22 1222 35 HOH HOH . D 4 HOH A 23 1223 5 HOH HOH . D 4 HOH A 24 1224 109 HOH HOH . D 4 HOH A 25 1225 145 HOH HOH . D 4 HOH A 26 1226 39 HOH HOH . D 4 HOH A 27 1227 20 HOH HOH . D 4 HOH A 28 1228 113 HOH HOH . D 4 HOH A 29 1229 50 HOH HOH . D 4 HOH A 30 1230 98 HOH HOH . D 4 HOH A 31 1231 81 HOH HOH . D 4 HOH A 32 1232 29 HOH HOH . D 4 HOH A 33 1233 147 HOH HOH . D 4 HOH A 34 1234 43 HOH HOH . D 4 HOH A 35 1235 117 HOH HOH . D 4 HOH A 36 1236 125 HOH HOH . D 4 HOH A 37 1237 75 HOH HOH . D 4 HOH A 38 1238 16 HOH HOH . D 4 HOH A 39 1239 9 HOH HOH . D 4 HOH A 40 1240 41 HOH HOH . D 4 HOH A 41 1241 106 HOH HOH . D 4 HOH A 42 1242 102 HOH HOH . D 4 HOH A 43 1243 46 HOH HOH . D 4 HOH A 44 1244 138 HOH HOH . D 4 HOH A 45 1245 27 HOH HOH . D 4 HOH A 46 1246 59 HOH HOH . D 4 HOH A 47 1247 76 HOH HOH . D 4 HOH A 48 1248 154 HOH HOH . D 4 HOH A 49 1249 22 HOH HOH . D 4 HOH A 50 1250 42 HOH HOH . D 4 HOH A 51 1251 25 HOH HOH . D 4 HOH A 52 1252 84 HOH HOH . D 4 HOH A 53 1253 40 HOH HOH . D 4 HOH A 54 1254 13 HOH HOH . D 4 HOH A 55 1255 87 HOH HOH . D 4 HOH A 56 1256 96 HOH HOH . D 4 HOH A 57 1257 92 HOH HOH . D 4 HOH A 58 1258 153 HOH HOH . D 4 HOH A 59 1259 151 HOH HOH . D 4 HOH A 60 1260 45 HOH HOH . D 4 HOH A 61 1261 111 HOH HOH . D 4 HOH A 62 1262 100 HOH HOH . D 4 HOH A 63 1263 10 HOH HOH . D 4 HOH A 64 1264 24 HOH HOH . D 4 HOH A 65 1265 103 HOH HOH . D 4 HOH A 66 1266 23 HOH HOH . D 4 HOH A 67 1267 131 HOH HOH . D 4 HOH A 68 1268 85 HOH HOH . D 4 HOH A 69 1269 56 HOH HOH . D 4 HOH A 70 1270 91 HOH HOH . D 4 HOH A 71 1271 51 HOH HOH . D 4 HOH A 72 1272 120 HOH HOH . D 4 HOH A 73 1273 134 HOH HOH . D 4 HOH A 74 1274 108 HOH HOH . D 4 HOH A 75 1275 93 HOH HOH . D 4 HOH A 76 1276 44 HOH HOH . D 4 HOH A 77 1277 95 HOH HOH . D 4 HOH A 78 1278 63 HOH HOH . D 4 HOH A 79 1279 122 HOH HOH . D 4 HOH A 80 1280 90 HOH HOH . D 4 HOH A 81 1281 38 HOH HOH . D 4 HOH A 82 1282 86 HOH HOH . D 4 HOH A 83 1283 2 HOH HOH . D 4 HOH A 84 1284 47 HOH HOH . D 4 HOH A 85 1285 158 HOH HOH . D 4 HOH A 86 1286 33 HOH HOH . D 4 HOH A 87 1287 7 HOH HOH . D 4 HOH A 88 1288 28 HOH HOH . D 4 HOH A 89 1289 66 HOH HOH . D 4 HOH A 90 1290 162 HOH HOH . D 4 HOH A 91 1291 148 HOH HOH . D 4 HOH A 92 1292 67 HOH HOH . D 4 HOH A 93 1293 49 HOH HOH . D 4 HOH A 94 1294 70 HOH HOH . D 4 HOH A 95 1295 48 HOH HOH . D 4 HOH A 96 1296 143 HOH HOH . D 4 HOH A 97 1297 32 HOH HOH . D 4 HOH A 98 1298 112 HOH HOH . D 4 HOH A 99 1299 105 HOH HOH . D 4 HOH A 100 1300 78 HOH HOH . D 4 HOH A 101 1301 137 HOH HOH . D 4 HOH A 102 1302 133 HOH HOH . D 4 HOH A 103 1303 132 HOH HOH . D 4 HOH A 104 1304 69 HOH HOH . D 4 HOH A 105 1305 82 HOH HOH . D 4 HOH A 106 1306 135 HOH HOH . D 4 HOH A 107 1307 139 HOH HOH . D 4 HOH A 108 1308 121 HOH HOH . D 4 HOH A 109 1309 61 HOH HOH . D 4 HOH A 110 1310 83 HOH HOH . D 4 HOH A 111 1311 161 HOH HOH . D 4 HOH A 112 1312 114 HOH HOH . D 4 HOH A 113 1313 163 HOH HOH . D 4 HOH A 114 1314 34 HOH HOH . D 4 HOH A 115 1315 58 HOH HOH . D 4 HOH A 116 1316 8 HOH HOH . D 4 HOH A 117 1317 146 HOH HOH . D 4 HOH A 118 1318 11 HOH HOH . D 4 HOH A 119 1319 94 HOH HOH . D 4 HOH A 120 1320 15 HOH HOH . D 4 HOH A 121 1321 140 HOH HOH . D 4 HOH A 122 1322 1 HOH HOH . D 4 HOH A 123 1323 104 HOH HOH . D 4 HOH A 124 1324 152 HOH HOH . D 4 HOH A 125 1325 129 HOH HOH . D 4 HOH A 126 1326 6 HOH HOH . D 4 HOH A 127 1327 73 HOH HOH . D 4 HOH A 128 1328 17 HOH HOH . D 4 HOH A 129 1329 18 HOH HOH . E 4 HOH B 1 601 68 HOH HOH . E 4 HOH B 2 602 149 HOH HOH . E 4 HOH B 3 603 14 HOH HOH . E 4 HOH B 4 604 62 HOH HOH . E 4 HOH B 5 605 118 HOH HOH . E 4 HOH B 6 606 31 HOH HOH . E 4 HOH B 7 607 126 HOH HOH . E 4 HOH B 8 608 97 HOH HOH . E 4 HOH B 9 609 77 HOH HOH . E 4 HOH B 10 610 88 HOH HOH . E 4 HOH B 11 611 57 HOH HOH . E 4 HOH B 12 612 3 HOH HOH . E 4 HOH B 13 613 72 HOH HOH . E 4 HOH B 14 614 128 HOH HOH . E 4 HOH B 15 615 99 HOH HOH . E 4 HOH B 16 616 37 HOH HOH . E 4 HOH B 17 617 107 HOH HOH . E 4 HOH B 18 618 21 HOH HOH . E 4 HOH B 19 619 141 HOH HOH . E 4 HOH B 20 620 4 HOH HOH . E 4 HOH B 21 621 115 HOH HOH . E 4 HOH B 22 622 150 HOH HOH . E 4 HOH B 23 623 60 HOH HOH . E 4 HOH B 24 624 53 HOH HOH . E 4 HOH B 25 625 26 HOH HOH . E 4 HOH B 26 626 74 HOH HOH . E 4 HOH B 27 627 71 HOH HOH . E 4 HOH B 28 628 110 HOH HOH . E 4 HOH B 29 629 142 HOH HOH . E 4 HOH B 30 630 119 HOH HOH . E 4 HOH B 31 631 80 HOH HOH . E 4 HOH B 32 632 123 HOH HOH . E 4 HOH B 33 633 79 HOH HOH . E 4 HOH B 34 634 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 8DY . . . C 3 -1.184 -4.454 -13.747 1 80.69 ? C1 8DY 1101 A 1 HETATM 2 C C2 8DY . . . C 3 -2.302 -3.4 -14.041 1 83.52 ? C2 8DY 1101 A 1 HETATM 3 C C3 8DY . . . C 3 -4.252 -3.028 -12.61 1 86.25 ? C3 8DY 1101 A 1 HETATM 4 O O1 8DY . . . C 3 0.035 -3.387 -15.827 1 74.37 ? O1 8DY 1101 A 1 HETATM 5 O O2 8DY . . . C 3 4.37 -11.709 -20.062 1 62.36 ? O2 8DY 1101 A 1 HETATM 6 C C11 8DY . . . C 3 1.871 -9.696 -16.706 1 59.2 ? C11 8DY 1101 A 1 HETATM 7 C C12 8DY . . . C 3 1.839 -10.837 -15.902 1 58.25 ? C12 8DY 1101 A 1 HETATM 8 C C13 8DY . . . C 3 2.829 -12.101 -17.558 1 60.12 ? C13 8DY 1101 A 1 HETATM 9 C C14 8DY . . . C 3 2.858 -10.944 -18.391 1 61.34 ? C14 8DY 1101 A 1 HETATM 10 C C15 8DY . . . C 3 3.477 -10.918 -19.765 1 61.04 ? C15 8DY 1101 A 1 HETATM 11 C C16 8DY . . . C 3 3.423 -9.77 -21.958 1 58.76 ? C16 8DY 1101 A 1 HETATM 12 C C17 8DY . . . C 3 3.055 -8.592 -22.599 1 57.69 ? C17 8DY 1101 A 1 HETATM 13 C C18 8DY . . . C 3 3.519 -8.326 -23.878 1 56.95 ? C18 8DY 1101 A 1 HETATM 14 C C19 8DY . . . C 3 4.344 -9.228 -24.525 1 56.87 ? C19 8DY 1101 A 1 HETATM 15 C C20 8DY . . . C 3 4.704 -10.405 -23.895 1 58.24 ? C20 8DY 1101 A 1 HETATM 16 C C21 8DY . . . C 3 4.246 -10.682 -22.617 1 58.4 ? C21 8DY 1101 A 1 HETATM 17 N N 8DY . . . C 3 -3.639 -3.875 -13.629 1 85.94 ? N 8DY 1101 A 1 HETATM 18 C C 8DY . . . C 3 -0.907 -4.539 -12.253 1 82.19 ? C 8DY 1101 A 1 HETATM 19 O O 8DY . . . C 3 1.369 -3.796 -13.784 1 74.52 ? O 8DY 1101 A 1 HETATM 20 C C10 8DY . . . C 3 0.759 -6.08 -16.648 1 64.33 ? C10 8DY 1101 A 1 HETATM 21 C C4 8DY . . . C 3 -4.546 -4.029 -14.764 1 86.8 ? C4 8DY 1101 A 1 HETATM 22 C C5 8DY . . . C 3 0.751 -5.829 -15.282 1 68.64 ? C5 8DY 1101 A 1 HETATM 23 C C6 8DY . . . C 3 1.092 -6.821 -14.379 1 66.42 ? C6 8DY 1101 A 1 HETATM 24 C C7 8DY . . . C 3 1.442 -8.074 -14.848 1 63.69 ? C7 8DY 1101 A 1 HETATM 25 C C8 8DY . . . C 3 1.466 -8.357 -16.215 1 61.05 ? C8 8DY 1101 A 1 HETATM 26 C C9 8DY . . . C 3 1.116 -7.338 -17.102 1 61.25 ? C9 8DY 1101 A 1 HETATM 27 N N1 8DY . . . C 3 2.308 -12.014 -16.314 1 59.75 ? N1 8DY 1101 A 1 HETATM 28 N N2 8DY . . . C 3 3.298 -13.288 -17.95 1 58.3 ? N2 8DY 1101 A 1 HETATM 29 N N3 8DY . . . C 3 2.372 -9.766 -17.957 1 60.58 ? N3 8DY 1101 A 1 HETATM 30 N N4 8DY . . . C 3 2.99 -9.997 -20.629 1 58.94 ? N4 8DY 1101 A 1 HETATM 31 S S 8DY . . . C 3 0.332 -4.216 -14.699 1 74.96 ? S 8DY 1101 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 231 _model_server_stats.create_model_time_ms 211 _model_server_stats.query_time_ms 435 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #