data_5ULO
#
_model_server_result.job_id            KjKdjQPMxylTqLQj9uY2Ug 
_model_server_result.datetime_utc      '2024-11-13 20:18:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ulo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    5ULO 
#
_exptl.entry_id    5ULO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5ULO 
_cell.length_a            69.709 
_cell.length_b            71.575 
_cell.length_c            129.899 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ULO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C PRO 10 C PRO 123 1_555 C N SEP 11 C SEP 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale2 C C SEP 11 C SEP 124 1_555 C N PHE 12 C PHE 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale3 C C PRO 13 C PRO 126 1_555 C N NH2 14 C NH2 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale4 D C PRO 10 D PRO 123 1_555 D N SEP 11 D SEP 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale5 D C SEP 11 D SEP 124 1_555 D N PHE 12 D PHE 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale6 D C PRO 13 D PRO 126 1_555 D N NH2 14 D NH2 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 89 n n 
C1 C2 EDO sing 90 n n 
C1 H11 EDO sing 91 n n 
C1 H12 EDO sing 92 n n 
O1 HO1 EDO sing 93 n n 
C2 O2 EDO sing 94 n n 
C2 H21 EDO sing 95 n n 
C2 H22 EDO sing 96 n n 
O2 HO2 EDO sing 97 n n 
#
_atom_sites.entry_id                     5ULO 
_atom_sites.fract_transf_matrix[1][1]    0.014345 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013971 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007698 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 EDO A 1 301 204 EDO EDO . 
F 3 EDO A 1 302 208 EDO EDO . 
G 4 UNX A 1 303 1004 UNX UNX . 
H 4 UNX A 1 304 1006 UNX UNX . 
I 4 UNX B 1 301 1000 UNX UNX . 
J 4 UNX B 1 302 1001 UNX UNX . 
K 4 UNX B 1 303 1002 UNX UNX . 
L 4 UNX B 1 304 1003 UNX UNX . 
M 4 UNX B 1 305 1007 UNX UNX . 
N 4 UNX D 1 201 1005 UNX UNX . 
O 5 HOH A 1 401 32 HOH HOH . 
O 5 HOH A 2 402 9 HOH HOH . 
O 5 HOH A 3 403 28 HOH HOH . 
O 5 HOH A 4 404 45 HOH HOH . 
O 5 HOH A 5 405 57 HOH HOH . 
O 5 HOH A 6 406 14 HOH HOH . 
O 5 HOH A 7 407 4 HOH HOH . 
O 5 HOH A 8 408 34 HOH HOH . 
O 5 HOH A 9 409 58 HOH HOH . 
O 5 HOH A 10 410 47 HOH HOH . 
O 5 HOH A 11 411 43 HOH HOH . 
O 5 HOH A 12 412 26 HOH HOH . 
O 5 HOH A 13 413 55 HOH HOH . 
O 5 HOH A 14 414 31 HOH HOH . 
O 5 HOH A 15 415 7 HOH HOH . 
O 5 HOH A 16 416 2 HOH HOH . 
O 5 HOH A 17 417 18 HOH HOH . 
O 5 HOH A 18 418 13 HOH HOH . 
O 5 HOH A 19 419 27 HOH HOH . 
O 5 HOH A 20 420 8 HOH HOH . 
O 5 HOH A 21 421 15 HOH HOH . 
O 5 HOH A 22 422 6 HOH HOH . 
O 5 HOH A 23 423 30 HOH HOH . 
O 5 HOH A 24 424 60 HOH HOH . 
O 5 HOH A 25 425 59 HOH HOH . 
O 5 HOH A 26 426 19 HOH HOH . 
O 5 HOH A 27 427 29 HOH HOH . 
O 5 HOH A 28 428 16 HOH HOH . 
O 5 HOH A 29 429 17 HOH HOH . 
O 5 HOH A 30 430 46 HOH HOH . 
P 5 HOH B 1 401 48 HOH HOH . 
P 5 HOH B 2 402 20 HOH HOH . 
P 5 HOH B 3 403 52 HOH HOH . 
P 5 HOH B 4 404 40 HOH HOH . 
P 5 HOH B 5 405 37 HOH HOH . 
P 5 HOH B 6 406 5 HOH HOH . 
P 5 HOH B 7 407 1 HOH HOH . 
P 5 HOH B 8 408 21 HOH HOH . 
P 5 HOH B 9 409 36 HOH HOH . 
P 5 HOH B 10 410 10 HOH HOH . 
P 5 HOH B 11 411 44 HOH HOH . 
P 5 HOH B 12 412 38 HOH HOH . 
P 5 HOH B 13 413 35 HOH HOH . 
P 5 HOH B 14 414 51 HOH HOH . 
P 5 HOH B 15 415 24 HOH HOH . 
P 5 HOH B 16 416 41 HOH HOH . 
P 5 HOH B 17 417 42 HOH HOH . 
P 5 HOH B 18 418 50 HOH HOH . 
P 5 HOH B 19 419 3 HOH HOH . 
P 5 HOH B 20 420 11 HOH HOH . 
P 5 HOH B 21 421 25 HOH HOH . 
P 5 HOH B 22 422 49 HOH HOH . 
P 5 HOH B 23 423 12 HOH HOH . 
P 5 HOH B 24 424 23 HOH HOH . 
P 5 HOH B 25 425 22 HOH HOH . 
P 5 HOH B 26 426 39 HOH HOH . 
P 5 HOH B 27 427 53 HOH HOH . 
Q 5 HOH C 1 301 54 HOH HOH . 
R 5 HOH D 1 301 56 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 3 66.953 9.692 35.181 1 89.89 ? C1 EDO 301 A 1 
HETATM 2 O O1 EDO . . . E 3 68.359 9.765 35.096 1 92.68 ? O1 EDO 301 A 1 
HETATM 3 C C2 EDO . . . E 3 66.403 11.118 35.031 1 88.4 ? C2 EDO 301 A 1 
HETATM 4 O O2 EDO . . . E 3 66.645 11.603 33.725 1 87.64 ? O2 EDO 301 A 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#