data_5ULW # _model_server_result.job_id O8zxy8OtqY4wlrafCDau_g _model_server_result.datetime_utc '2024-11-05 00:32:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ulw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":502}' # _entry.id 5ULW # _exptl.entry_id 5ULW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ULW _cell.length_a 97.918 _cell.length_b 97.918 _cell.length_c 202.473 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ULW _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DC 6 P DC 872 1_555 A P DOC 7 P DOC 873 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.592 ? covale ? covale2 B O3' DT 3 T DT 839 1_555 B P MA7 4 T MA7 840 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.621 ? covale ? covale3 B O3' MA7 4 T MA7 840 1_555 B P DG 5 T DG 841 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.588 ? metalc ? metalc1 C OD1 ASP 34 A ASP 34 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc2 C O LEU 35 A LEU 35 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc3 C OD2 ASP 126 A ASP 126 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc4 D O1A TTP . A TTP 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc5 D O1B TTP . A TTP 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc6 D O3G TTP . A TTP 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? hydrog WATSON-CRICK hydrog1 A N1 DA 1 P DA 867 1_555 B N3 DT 11 T DT 847 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N6 DA 1 P DA 867 1_555 B O4 DT 11 T DT 847 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N1 DG 2 P DG 868 1_555 B N3 DC 10 T DC 846 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N2 DG 2 P DG 868 1_555 B O2 DC 10 T DC 846 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O6 DG 2 P DG 868 1_555 B N4 DC 10 T DC 846 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N1 DG 3 P DG 869 1_555 B N3 DC 9 T DC 845 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N2 DG 3 P DG 869 1_555 B O2 DC 9 T DC 845 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O6 DG 3 P DG 869 1_555 B N4 DC 9 T DC 845 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 DA 4 P DA 870 1_555 B N3 DT 8 T DT 844 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N6 DA 4 P DA 870 1_555 B O4 DT 8 T DT 844 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N3 DC 5 P DC 871 1_555 B N1 DG 7 T DG 843 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N4 DC 5 P DC 871 1_555 B O6 DG 7 T DG 843 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O2 DC 5 P DC 871 1_555 B N2 DG 7 T DG 843 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DC 6 P DC 872 1_555 B N1 DG 6 T DG 842 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N4 DC 6 P DC 872 1_555 B O6 DG 6 T DG 842 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O2 DC 6 P DC 872 1_555 B N2 DG 6 T DG 842 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N3 DOC 7 P DOC 873 1_555 B N1 DG 5 T DG 841 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N4 DOC 7 P DOC 873 1_555 B O6 DG 5 T DG 841 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A O2 DOC 7 P DOC 873 1_555 B N2 DG 5 T DG 841 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ULW _atom_sites.fract_transf_matrix[1][1] 0.010213 _atom_sites.fract_transf_matrix[1][2] 0.005896 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011793 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004939 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 TTP A 1 501 1 TTP TTP . E 5 MG A 1 502 1 MG MG . F 6 CL A 1 503 1 CL CL . G 7 HOH P 1 901 20 HOH HOH . G 7 HOH P 2 902 29 HOH HOH . H 7 HOH T 1 901 28 HOH HOH . H 7 HOH T 2 902 13 HOH HOH . H 7 HOH T 3 903 41 HOH HOH . H 7 HOH T 4 904 50 HOH HOH . H 7 HOH T 5 905 56 HOH HOH . I 7 HOH A 1 601 83 HOH HOH . I 7 HOH A 2 602 66 HOH HOH . I 7 HOH A 3 603 80 HOH HOH . I 7 HOH A 4 604 24 HOH HOH . I 7 HOH A 5 605 18 HOH HOH . I 7 HOH A 6 606 42 HOH HOH . I 7 HOH A 7 607 10 HOH HOH . I 7 HOH A 8 608 8 HOH HOH . I 7 HOH A 9 609 47 HOH HOH . I 7 HOH A 10 610 32 HOH HOH . I 7 HOH A 11 611 92 HOH HOH . I 7 HOH A 12 612 43 HOH HOH . I 7 HOH A 13 613 2 HOH HOH . I 7 HOH A 14 614 14 HOH HOH . I 7 HOH A 15 615 73 HOH HOH . I 7 HOH A 16 616 17 HOH HOH . I 7 HOH A 17 617 40 HOH HOH . I 7 HOH A 18 618 53 HOH HOH . I 7 HOH A 19 619 82 HOH HOH . I 7 HOH A 20 620 21 HOH HOH . I 7 HOH A 21 621 46 HOH HOH . I 7 HOH A 22 622 1 HOH HOH . I 7 HOH A 23 623 7 HOH HOH . I 7 HOH A 24 624 23 HOH HOH . I 7 HOH A 25 625 63 HOH HOH . I 7 HOH A 26 626 60 HOH HOH . I 7 HOH A 27 627 51 HOH HOH . I 7 HOH A 28 628 88 HOH HOH . I 7 HOH A 29 629 36 HOH HOH . I 7 HOH A 30 630 22 HOH HOH . I 7 HOH A 31 631 5 HOH HOH . I 7 HOH A 32 632 67 HOH HOH . I 7 HOH A 33 633 26 HOH HOH . I 7 HOH A 34 634 4 HOH HOH . I 7 HOH A 35 635 11 HOH HOH . I 7 HOH A 36 636 86 HOH HOH . I 7 HOH A 37 637 19 HOH HOH . I 7 HOH A 38 638 91 HOH HOH . I 7 HOH A 39 639 62 HOH HOH . I 7 HOH A 40 640 12 HOH HOH . I 7 HOH A 41 641 64 HOH HOH . I 7 HOH A 42 642 65 HOH HOH . I 7 HOH A 43 643 33 HOH HOH . I 7 HOH A 44 644 75 HOH HOH . I 7 HOH A 45 645 3 HOH HOH . I 7 HOH A 46 646 59 HOH HOH . I 7 HOH A 47 647 49 HOH HOH . I 7 HOH A 48 648 6 HOH HOH . I 7 HOH A 49 649 15 HOH HOH . I 7 HOH A 50 650 27 HOH HOH . I 7 HOH A 51 651 16 HOH HOH . I 7 HOH A 52 652 35 HOH HOH . I 7 HOH A 53 653 44 HOH HOH . I 7 HOH A 54 654 57 HOH HOH . I 7 HOH A 55 655 81 HOH HOH . I 7 HOH A 56 656 84 HOH HOH . I 7 HOH A 57 657 48 HOH HOH . I 7 HOH A 58 658 30 HOH HOH . I 7 HOH A 59 659 9 HOH HOH . I 7 HOH A 60 660 85 HOH HOH . I 7 HOH A 61 661 68 HOH HOH . I 7 HOH A 62 662 34 HOH HOH . I 7 HOH A 63 663 71 HOH HOH . I 7 HOH A 64 664 77 HOH HOH . I 7 HOH A 65 665 45 HOH HOH . I 7 HOH A 66 666 31 HOH HOH . I 7 HOH A 67 667 25 HOH HOH . I 7 HOH A 68 668 38 HOH HOH . I 7 HOH A 69 669 39 HOH HOH . I 7 HOH A 70 670 37 HOH HOH . I 7 HOH A 71 671 72 HOH HOH . I 7 HOH A 72 672 78 HOH HOH . I 7 HOH A 73 673 58 HOH HOH . I 7 HOH A 74 674 52 HOH HOH . I 7 HOH A 75 675 54 HOH HOH . I 7 HOH A 76 676 69 HOH HOH . I 7 HOH A 77 677 61 HOH HOH . I 7 HOH A 78 678 55 HOH HOH . I 7 HOH A 79 679 76 HOH HOH . I 7 HOH A 80 680 79 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 5.166 _atom_site.Cartn_y 19.471 _atom_site.Cartn_z 14.469 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #