data_5UME
#
_model_server_result.job_id            MzjgvSIK2XGslbt9-SfBcQ 
_model_server_result.datetime_utc      '2025-06-28 01:30:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ume 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":300}' 
#
_entry.id    5UME 
#
_exptl.entry_id    5UME 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5UME 
_cell.length_a            90.065 
_cell.length_b            134.96 
_cell.length_c            182.985 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5UME 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,G,H,I,J,S,T,U,V,W,DA,GA 1 1 
B,F,K,L,M,N,Z,AA,BA,CA,EA,IA 2 1 
C,E,O,P,Q,R,X,Y,FA,HA 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 K N N 
? 2 O N N 
? 2 S N N 
? 2 X N N 
? 2 Z N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 99 n n 
PA O2A FAD sing 100 n n 
PA O5B FAD sing 101 n n 
PA O3P FAD sing 102 n n 
O2A HOA2 FAD sing 103 n n 
O5B C5B FAD sing 104 n n 
C5B C4B FAD sing 105 n n 
C5B H51A FAD sing 106 n n 
C5B H52A FAD sing 107 n n 
C4B O4B FAD sing 108 n n 
C4B C3B FAD sing 109 n n 
C4B H4B FAD sing 110 n n 
O4B C1B FAD sing 111 n n 
C3B O3B FAD sing 112 n n 
C3B C2B FAD sing 113 n n 
C3B H3B FAD sing 114 n n 
O3B HO3A FAD sing 115 n n 
C2B O2B FAD sing 116 n n 
C2B C1B FAD sing 117 n n 
C2B H2B FAD sing 118 n n 
O2B HO2A FAD sing 119 n n 
C1B N9A FAD sing 120 n n 
C1B H1B FAD sing 121 n n 
N9A C8A FAD sing 122 n y 
N9A C4A FAD sing 123 n y 
C8A N7A FAD doub 124 n y 
C8A H8A FAD sing 125 n n 
N7A C5A FAD sing 126 n y 
C5A C6A FAD sing 127 n y 
C5A C4A FAD doub 128 n y 
C6A N6A FAD sing 129 n n 
C6A N1A FAD doub 130 n y 
N6A H61A FAD sing 131 n n 
N6A H62A FAD sing 132 n n 
N1A C2A FAD sing 133 n y 
C2A N3A FAD doub 134 n y 
C2A H2A FAD sing 135 n n 
N3A C4A FAD sing 136 n y 
N1 C2 FAD sing 137 n n 
N1 C10 FAD doub 138 n n 
C2 O2 FAD doub 139 n n 
C2 N3 FAD sing 140 n n 
N3 C4 FAD sing 141 n n 
N3 HN3 FAD sing 142 n n 
C4 O4 FAD doub 143 n n 
C4 C4X FAD sing 144 n n 
C4X N5 FAD doub 145 n n 
C4X C10 FAD sing 146 n n 
N5 C5X FAD sing 147 n n 
C5X C6 FAD doub 148 n y 
C5X C9A FAD sing 149 n y 
C6 C7 FAD sing 150 n y 
C6 H6 FAD sing 151 n n 
C7 C7M FAD sing 152 n n 
C7 C8 FAD doub 153 n y 
C7M HM71 FAD sing 154 n n 
C7M HM72 FAD sing 155 n n 
C7M HM73 FAD sing 156 n n 
C8 C8M FAD sing 157 n n 
C8 C9 FAD sing 158 n y 
C8M HM81 FAD sing 159 n n 
C8M HM82 FAD sing 160 n n 
C8M HM83 FAD sing 161 n n 
C9 C9A FAD doub 162 n y 
C9 H9 FAD sing 163 n n 
C9A N10 FAD sing 164 n n 
N10 C10 FAD sing 165 n n 
N10 C1' FAD sing 166 n n 
C1' C2' FAD sing 167 n n 
C1' "H1'1" FAD sing 168 n n 
C1' "H1'2" FAD sing 169 n n 
C2' O2' FAD sing 170 n n 
C2' C3' FAD sing 171 n n 
C2' H2' FAD sing 172 n n 
O2' HO2' FAD sing 173 n n 
C3' O3' FAD sing 174 n n 
C3' C4' FAD sing 175 n n 
C3' H3' FAD sing 176 n n 
O3' HO3' FAD sing 177 n n 
C4' O4' FAD sing 178 n n 
C4' C5' FAD sing 179 n n 
C4' H4' FAD sing 180 n n 
O4' HO4' FAD sing 181 n n 
C5' O5' FAD sing 182 n n 
C5' "H5'1" FAD sing 183 n n 
C5' "H5'2" FAD sing 184 n n 
O5' P FAD sing 185 n n 
P O1P FAD doub 186 n n 
P O2P FAD sing 187 n n 
P O3P FAD sing 188 n n 
O2P HOP2 FAD sing 189 n n 
#
_atom_sites.entry_id                     5UME 
_atom_sites.fract_transf_matrix[1][1]    0.011103 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00741 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005465 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 FAD A 1 300 300 FAD FAD . 
H 3 SO4 A 1 301 301 SO4 SO4 . 
I 4 ACY A 1 302 302 ACY ACY . 
J 5 EDO A 1 303 303 EDO EDO . 
K 2 FAD B 1 300 300 FAD FAD . 
L 3 SO4 B 1 301 301 SO4 SO4 . 
M 4 ACY B 1 302 302 ACY ACY . 
N 6 FMT B 1 303 303 FMT FMT . 
O 2 FAD C 1 300 300 FAD FAD . 
P 6 FMT C 1 301 301 FMT FMT . 
Q 6 FMT C 1 302 302 FMT FMT . 
R 4 ACY C 1 303 303 ACY ACY . 
S 2 FAD D 1 300 300 FAD FAD . 
T 4 ACY D 1 301 301 ACY ACY . 
U 4 ACY D 1 302 302 ACY ACY . 
V 4 ACY D 1 303 303 ACY ACY . 
W 6 FMT D 1 304 304 FMT FMT . 
X 2 FAD E 1 300 300 FAD FAD . 
Y 4 ACY E 1 301 301 ACY ACY . 
Z 2 FAD F 1 300 300 FAD FAD . 
AA 4 ACY F 1 301 301 ACY ACY . 
BA 4 ACY F 1 302 302 ACY ACY . 
CA 5 EDO F 1 303 303 EDO EDO . 
DA 7 HOH A 1 401 45 HOH HOH . 
DA 7 HOH A 2 402 24 HOH HOH . 
DA 7 HOH A 3 403 6 HOH HOH . 
DA 7 HOH A 4 404 26 HOH HOH . 
DA 7 HOH A 5 405 4 HOH HOH . 
DA 7 HOH A 6 406 7 HOH HOH . 
DA 7 HOH A 7 407 47 HOH HOH . 
DA 7 HOH A 8 408 20 HOH HOH . 
DA 7 HOH A 9 409 5 HOH HOH . 
DA 7 HOH A 10 410 25 HOH HOH . 
EA 7 HOH B 1 401 15 HOH HOH . 
EA 7 HOH B 2 402 43 HOH HOH . 
EA 7 HOH B 3 403 19 HOH HOH . 
EA 7 HOH B 4 404 10 HOH HOH . 
FA 7 HOH C 1 401 22 HOH HOH . 
FA 7 HOH C 2 402 28 HOH HOH . 
FA 7 HOH C 3 403 3 HOH HOH . 
FA 7 HOH C 4 404 41 HOH HOH . 
FA 7 HOH C 5 405 17 HOH HOH . 
FA 7 HOH C 6 406 27 HOH HOH . 
FA 7 HOH C 7 407 21 HOH HOH . 
FA 7 HOH C 8 408 13 HOH HOH . 
GA 7 HOH D 1 401 31 HOH HOH . 
GA 7 HOH D 2 402 8 HOH HOH . 
GA 7 HOH D 3 403 29 HOH HOH . 
GA 7 HOH D 4 404 30 HOH HOH . 
GA 7 HOH D 5 405 2 HOH HOH . 
GA 7 HOH D 6 406 33 HOH HOH . 
GA 7 HOH D 7 407 12 HOH HOH . 
GA 7 HOH D 8 408 32 HOH HOH . 
HA 7 HOH E 1 401 34 HOH HOH . 
HA 7 HOH E 2 402 40 HOH HOH . 
HA 7 HOH E 3 403 35 HOH HOH . 
HA 7 HOH E 4 404 38 HOH HOH . 
HA 7 HOH E 5 405 14 HOH HOH . 
HA 7 HOH E 6 406 37 HOH HOH . 
HA 7 HOH E 7 407 16 HOH HOH . 
HA 7 HOH E 8 408 36 HOH HOH . 
HA 7 HOH E 9 409 11 HOH HOH . 
IA 7 HOH F 1 401 9 HOH HOH . 
IA 7 HOH F 2 402 44 HOH HOH . 
IA 7 HOH F 3 403 46 HOH HOH . 
IA 7 HOH F 4 404 48 HOH HOH . 
IA 7 HOH F 5 405 1 HOH HOH . 
IA 7 HOH F 6 406 42 HOH HOH . 
IA 7 HOH F 7 407 39 HOH HOH . 
IA 7 HOH F 8 408 23 HOH HOH . 
IA 7 HOH F 9 409 18 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . O 2 -8.169 13.398 43.934 1 64.88 ? PA FAD 300 C 1 
HETATM 2 O O1A FAD . . . O 2 -9.462 13.236 43.248 1 72.06 ? O1A FAD 300 C 1 
HETATM 3 O O2A FAD . . . O 2 -7.567 12.012 44.292 1 50.61 ? O2A FAD 300 C 1 
HETATM 4 O O5B FAD . . . O 2 -8.306 14.42 45.118 1 66.42 ? O5B FAD 300 C 1 
HETATM 5 C C5B FAD . . . O 2 -8.757 15.773 44.896 1 63.86 ? C5B FAD 300 C 1 
HETATM 6 C C4B FAD . . . O 2 -9.387 16.285 46.173 1 73.5 ? C4B FAD 300 C 1 
HETATM 7 O O4B FAD . . . O 2 -10.817 16.073 46.13 1 80.35 ? O4B FAD 300 C 1 
HETATM 8 C C3B FAD . . . O 2 -8.913 15.645 47.48 1 73.6 ? C3B FAD 300 C 1 
HETATM 9 O O3B FAD . . . O 2 -8.935 16.589 48.541 1 67.78 ? O3B FAD 300 C 1 
HETATM 10 C C2B FAD . . . O 2 -9.995 14.604 47.758 1 76.26 ? C2B FAD 300 C 1 
HETATM 11 O O2B FAD . . . O 2 -10.116 14.296 49.14 1 73.57 ? O2B FAD 300 C 1 
HETATM 12 C C1B FAD . . . O 2 -11.234 15.34 47.265 1 78.42 ? C1B FAD 300 C 1 
HETATM 13 N N9A FAD . . . O 2 -12.315 14.443 46.867 1 82.31 ? N9A FAD 300 C 1 
HETATM 14 C C8A FAD . . . O 2 -12.162 13.187 46.348 1 86.04 ? C8A FAD 300 C 1 
HETATM 15 N N7A FAD . . . O 2 -13.291 12.579 46.072 1 90.5 ? N7A FAD 300 C 1 
HETATM 16 C C5A FAD . . . O 2 -14.258 13.496 46.453 1 86.95 ? C5A FAD 300 C 1 
HETATM 17 C C6A FAD . . . O 2 -15.663 13.458 46.414 1 83.43 ? C6A FAD 300 C 1 
HETATM 18 N N6A FAD . . . O 2 -16.362 12.413 45.958 1 84.38 ? N6A FAD 300 C 1 
HETATM 19 N N1A FAD . . . O 2 -16.332 14.549 46.853 1 82.34 ? N1A FAD 300 C 1 
HETATM 20 C C2A FAD . . . O 2 -15.635 15.595 47.304 1 81.14 ? C2A FAD 300 C 1 
HETATM 21 N N3A FAD . . . O 2 -14.312 15.745 47.388 1 85.28 ? N3A FAD 300 C 1 
HETATM 22 C C4A FAD . . . O 2 -13.673 14.652 46.944 1 86.02 ? C4A FAD 300 C 1 
HETATM 23 N N1 FAD . . . O 2 -0.939 17.593 38.813 1 86.37 ? N1 FAD 300 C 1 
HETATM 24 C C2 FAD . . . O 2 -0.887 17.896 37.479 1 76.23 ? C2 FAD 300 C 1 
HETATM 25 O O2 FAD . . . O 2 -1.503 18.866 37.005 1 74.21 ? O2 FAD 300 C 1 
HETATM 26 N N3 FAD . . . O 2 -0.113 17.111 36.631 1 66.2 ? N3 FAD 300 C 1 
HETATM 27 C C4 FAD . . . O 2 0.637 16.006 37.002 1 69.41 ? C4 FAD 300 C 1 
HETATM 28 O O4 FAD . . . O 2 1.29 15.389 36.165 1 63.96 ? O4 FAD 300 C 1 
HETATM 29 C C4X FAD . . . O 2 0.568 15.69 38.419 1 79.25 ? C4X FAD 300 C 1 
HETATM 30 N N5 FAD . . . O 2 1.254 14.652 38.862 1 72.86 ? N5 FAD 300 C 1 
HETATM 31 C C5X FAD . . . O 2 1.182 14.356 40.204 1 67.94 ? C5X FAD 300 C 1 
HETATM 32 C C6 FAD . . . O 2 1.886 13.251 40.686 1 63.58 ? C6 FAD 300 C 1 
HETATM 33 C C7 FAD . . . O 2 1.852 12.915 42.037 1 64.95 ? C7 FAD 300 C 1 
HETATM 34 C C7M FAD . . . O 2 2.627 11.721 42.524 1 65.26 ? C7M FAD 300 C 1 
HETATM 35 C C8 FAD . . . O 2 1.091 13.692 42.928 1 72.29 ? C8 FAD 300 C 1 
HETATM 36 C C8M FAD . . . O 2 1.036 13.356 44.398 1 73.29 ? C8M FAD 300 C 1 
HETATM 37 C C9 FAD . . . O 2 0.378 14.789 42.448 1 74.78 ? C9 FAD 300 C 1 
HETATM 38 C C9A FAD . . . O 2 0.419 15.126 41.099 1 75.03 ? C9A FAD 300 C 1 
HETATM 39 N N10 FAD . . . O 2 -0.308 16.22 40.583 1 80.57 ? N10 FAD 300 C 1 
HETATM 40 C C10 FAD . . . O 2 -0.246 16.538 39.247 1 84.53 ? C10 FAD 300 C 1 
HETATM 41 C C1' FAD . . . O 2 -1.077 17.095 41.477 1 75.85 ? C1' FAD 300 C 1 
HETATM 42 C C2' FAD . . . O 2 -2.541 16.725 41.597 1 70.75 ? C2' FAD 300 C 1 
HETATM 43 O O2' FAD . . . O 2 -3.147 16.762 40.306 1 70.38 ? O2' FAD 300 C 1 
HETATM 44 C C3' FAD . . . O 2 -3.222 17.724 42.536 1 70.53 ? C3' FAD 300 C 1 
HETATM 45 O O3' FAD . . . O 2 -2.776 17.52 43.873 1 70.2 ? O3' FAD 300 C 1 
HETATM 46 C C4' FAD . . . O 2 -4.748 17.69 42.539 1 69.28 ? C4' FAD 300 C 1 
HETATM 47 O O4' FAD . . . O 2 -5.192 18.876 43.195 1 72.23 ? O4' FAD 300 C 1 
HETATM 48 C C5' FAD . . . O 2 -5.317 16.464 43.219 1 63.04 ? C5' FAD 300 C 1 
HETATM 49 O O5' FAD . . . O 2 -5.101 15.312 42.375 1 65.43 ? O5' FAD 300 C 1 
HETATM 50 P P FAD . . . O 2 -5.601 13.878 42.806 1 72.23 ? P FAD 300 C 1 
HETATM 51 O O1P FAD . . . O 2 -5.428 12.785 41.744 1 60.32 ? O1P FAD 300 C 1 
HETATM 52 O O2P FAD . . . O 2 -4.975 13.534 44.115 1 78.94 ? O2P FAD 300 C 1 
HETATM 53 O O3P FAD . . . O 2 -7.155 14.176 42.999 1 71.74 ? O3P FAD 300 C 1 
#
_model_server_stats.io_time_ms              144 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           53 
#