data_5UME
#
_model_server_result.job_id            xbmvbbHoMsW4BGwK6jsKvQ 
_model_server_result.datetime_utc      '2025-06-28 04:43:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ume 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":300}' 
#
_entry.id    5UME 
#
_exptl.entry_id    5UME 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5UME 
_cell.length_a            90.065 
_cell.length_b            134.96 
_cell.length_c            182.985 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5UME 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,G,H,I,J,S,T,U,V,W,DA,GA 1 1 
B,F,K,L,M,N,Z,AA,BA,CA,EA,IA 2 1 
C,E,O,P,Q,R,X,Y,FA,HA 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 K N N 
? 2 O N N 
? 2 S N N 
? 2 X N N 
? 2 Z N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 99 n n 
PA O2A FAD sing 100 n n 
PA O5B FAD sing 101 n n 
PA O3P FAD sing 102 n n 
O2A HOA2 FAD sing 103 n n 
O5B C5B FAD sing 104 n n 
C5B C4B FAD sing 105 n n 
C5B H51A FAD sing 106 n n 
C5B H52A FAD sing 107 n n 
C4B O4B FAD sing 108 n n 
C4B C3B FAD sing 109 n n 
C4B H4B FAD sing 110 n n 
O4B C1B FAD sing 111 n n 
C3B O3B FAD sing 112 n n 
C3B C2B FAD sing 113 n n 
C3B H3B FAD sing 114 n n 
O3B HO3A FAD sing 115 n n 
C2B O2B FAD sing 116 n n 
C2B C1B FAD sing 117 n n 
C2B H2B FAD sing 118 n n 
O2B HO2A FAD sing 119 n n 
C1B N9A FAD sing 120 n n 
C1B H1B FAD sing 121 n n 
N9A C8A FAD sing 122 n y 
N9A C4A FAD sing 123 n y 
C8A N7A FAD doub 124 n y 
C8A H8A FAD sing 125 n n 
N7A C5A FAD sing 126 n y 
C5A C6A FAD sing 127 n y 
C5A C4A FAD doub 128 n y 
C6A N6A FAD sing 129 n n 
C6A N1A FAD doub 130 n y 
N6A H61A FAD sing 131 n n 
N6A H62A FAD sing 132 n n 
N1A C2A FAD sing 133 n y 
C2A N3A FAD doub 134 n y 
C2A H2A FAD sing 135 n n 
N3A C4A FAD sing 136 n y 
N1 C2 FAD sing 137 n n 
N1 C10 FAD doub 138 n n 
C2 O2 FAD doub 139 n n 
C2 N3 FAD sing 140 n n 
N3 C4 FAD sing 141 n n 
N3 HN3 FAD sing 142 n n 
C4 O4 FAD doub 143 n n 
C4 C4X FAD sing 144 n n 
C4X N5 FAD doub 145 n n 
C4X C10 FAD sing 146 n n 
N5 C5X FAD sing 147 n n 
C5X C6 FAD doub 148 n y 
C5X C9A FAD sing 149 n y 
C6 C7 FAD sing 150 n y 
C6 H6 FAD sing 151 n n 
C7 C7M FAD sing 152 n n 
C7 C8 FAD doub 153 n y 
C7M HM71 FAD sing 154 n n 
C7M HM72 FAD sing 155 n n 
C7M HM73 FAD sing 156 n n 
C8 C8M FAD sing 157 n n 
C8 C9 FAD sing 158 n y 
C8M HM81 FAD sing 159 n n 
C8M HM82 FAD sing 160 n n 
C8M HM83 FAD sing 161 n n 
C9 C9A FAD doub 162 n y 
C9 H9 FAD sing 163 n n 
C9A N10 FAD sing 164 n n 
N10 C10 FAD sing 165 n n 
N10 C1' FAD sing 166 n n 
C1' C2' FAD sing 167 n n 
C1' "H1'1" FAD sing 168 n n 
C1' "H1'2" FAD sing 169 n n 
C2' O2' FAD sing 170 n n 
C2' C3' FAD sing 171 n n 
C2' H2' FAD sing 172 n n 
O2' HO2' FAD sing 173 n n 
C3' O3' FAD sing 174 n n 
C3' C4' FAD sing 175 n n 
C3' H3' FAD sing 176 n n 
O3' HO3' FAD sing 177 n n 
C4' O4' FAD sing 178 n n 
C4' C5' FAD sing 179 n n 
C4' H4' FAD sing 180 n n 
O4' HO4' FAD sing 181 n n 
C5' O5' FAD sing 182 n n 
C5' "H5'1" FAD sing 183 n n 
C5' "H5'2" FAD sing 184 n n 
O5' P FAD sing 185 n n 
P O1P FAD doub 186 n n 
P O2P FAD sing 187 n n 
P O3P FAD sing 188 n n 
O2P HOP2 FAD sing 189 n n 
#
_atom_sites.entry_id                     5UME 
_atom_sites.fract_transf_matrix[1][1]    0.011103 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00741 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005465 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 FAD A 1 300 300 FAD FAD . 
H 3 SO4 A 1 301 301 SO4 SO4 . 
I 4 ACY A 1 302 302 ACY ACY . 
J 5 EDO A 1 303 303 EDO EDO . 
K 2 FAD B 1 300 300 FAD FAD . 
L 3 SO4 B 1 301 301 SO4 SO4 . 
M 4 ACY B 1 302 302 ACY ACY . 
N 6 FMT B 1 303 303 FMT FMT . 
O 2 FAD C 1 300 300 FAD FAD . 
P 6 FMT C 1 301 301 FMT FMT . 
Q 6 FMT C 1 302 302 FMT FMT . 
R 4 ACY C 1 303 303 ACY ACY . 
S 2 FAD D 1 300 300 FAD FAD . 
T 4 ACY D 1 301 301 ACY ACY . 
U 4 ACY D 1 302 302 ACY ACY . 
V 4 ACY D 1 303 303 ACY ACY . 
W 6 FMT D 1 304 304 FMT FMT . 
X 2 FAD E 1 300 300 FAD FAD . 
Y 4 ACY E 1 301 301 ACY ACY . 
Z 2 FAD F 1 300 300 FAD FAD . 
AA 4 ACY F 1 301 301 ACY ACY . 
BA 4 ACY F 1 302 302 ACY ACY . 
CA 5 EDO F 1 303 303 EDO EDO . 
DA 7 HOH A 1 401 45 HOH HOH . 
DA 7 HOH A 2 402 24 HOH HOH . 
DA 7 HOH A 3 403 6 HOH HOH . 
DA 7 HOH A 4 404 26 HOH HOH . 
DA 7 HOH A 5 405 4 HOH HOH . 
DA 7 HOH A 6 406 7 HOH HOH . 
DA 7 HOH A 7 407 47 HOH HOH . 
DA 7 HOH A 8 408 20 HOH HOH . 
DA 7 HOH A 9 409 5 HOH HOH . 
DA 7 HOH A 10 410 25 HOH HOH . 
EA 7 HOH B 1 401 15 HOH HOH . 
EA 7 HOH B 2 402 43 HOH HOH . 
EA 7 HOH B 3 403 19 HOH HOH . 
EA 7 HOH B 4 404 10 HOH HOH . 
FA 7 HOH C 1 401 22 HOH HOH . 
FA 7 HOH C 2 402 28 HOH HOH . 
FA 7 HOH C 3 403 3 HOH HOH . 
FA 7 HOH C 4 404 41 HOH HOH . 
FA 7 HOH C 5 405 17 HOH HOH . 
FA 7 HOH C 6 406 27 HOH HOH . 
FA 7 HOH C 7 407 21 HOH HOH . 
FA 7 HOH C 8 408 13 HOH HOH . 
GA 7 HOH D 1 401 31 HOH HOH . 
GA 7 HOH D 2 402 8 HOH HOH . 
GA 7 HOH D 3 403 29 HOH HOH . 
GA 7 HOH D 4 404 30 HOH HOH . 
GA 7 HOH D 5 405 2 HOH HOH . 
GA 7 HOH D 6 406 33 HOH HOH . 
GA 7 HOH D 7 407 12 HOH HOH . 
GA 7 HOH D 8 408 32 HOH HOH . 
HA 7 HOH E 1 401 34 HOH HOH . 
HA 7 HOH E 2 402 40 HOH HOH . 
HA 7 HOH E 3 403 35 HOH HOH . 
HA 7 HOH E 4 404 38 HOH HOH . 
HA 7 HOH E 5 405 14 HOH HOH . 
HA 7 HOH E 6 406 37 HOH HOH . 
HA 7 HOH E 7 407 16 HOH HOH . 
HA 7 HOH E 8 408 36 HOH HOH . 
HA 7 HOH E 9 409 11 HOH HOH . 
IA 7 HOH F 1 401 9 HOH HOH . 
IA 7 HOH F 2 402 44 HOH HOH . 
IA 7 HOH F 3 403 46 HOH HOH . 
IA 7 HOH F 4 404 48 HOH HOH . 
IA 7 HOH F 5 405 1 HOH HOH . 
IA 7 HOH F 6 406 42 HOH HOH . 
IA 7 HOH F 7 407 39 HOH HOH . 
IA 7 HOH F 8 408 23 HOH HOH . 
IA 7 HOH F 9 409 18 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . S 2 -10.098 1.983 80.724 1 69.16 ? PA FAD 300 D 1 
HETATM 2 O O1A FAD . . . S 2 -11.392 1.699 80.09 1 79.2 ? O1A FAD 300 D 1 
HETATM 3 O O2A FAD . . . S 2 -9.17 2.978 79.993 1 57.11 ? O2A FAD 300 D 1 
HETATM 4 O O5B FAD . . . S 2 -9.34 0.581 80.811 1 66.4 ? O5B FAD 300 D 1 
HETATM 5 C C5B FAD . . . S 2 -9.512 -0.297 81.941 1 69.02 ? C5B FAD 300 D 1 
HETATM 6 C C4B FAD . . . S 2 -9.151 -1.703 81.531 1 74.13 ? C4B FAD 300 D 1 
HETATM 7 O O4B FAD . . . S 2 -10.101 -2.184 80.557 1 77.07 ? O4B FAD 300 D 1 
HETATM 8 C C3B FAD . . . S 2 -7.776 -1.901 80.898 1 78.88 ? C3B FAD 300 D 1 
HETATM 9 O O3B FAD . . . S 2 -7.291 -3.156 81.363 1 73.1 ? O3B FAD 300 D 1 
HETATM 10 C C2B FAD . . . S 2 -8.088 -1.89 79.392 1 79.73 ? C2B FAD 300 D 1 
HETATM 11 O O2B FAD . . . S 2 -7.108 -2.57 78.608 1 77.51 ? O2B FAD 300 D 1 
HETATM 12 C C1B FAD . . . S 2 -9.433 -2.612 79.382 1 78.71 ? C1B FAD 300 D 1 
HETATM 13 N N9A FAD . . . S 2 -10.316 -2.32 78.255 1 85.36 ? N9A FAD 300 D 1 
HETATM 14 C C8A FAD . . . S 2 -10.558 -1.094 77.692 1 88.01 ? C8A FAD 300 D 1 
HETATM 15 N N7A FAD . . . S 2 -11.452 -1.11 76.732 1 84.31 ? N7A FAD 300 D 1 
HETATM 16 C C5A FAD . . . S 2 -11.847 -2.438 76.676 1 90.28 ? C5A FAD 300 D 1 
HETATM 17 C C6A FAD . . . S 2 -12.778 -3.119 75.864 1 95.08 ? C6A FAD 300 D 1 
HETATM 18 N N6A FAD . . . S 2 -13.504 -2.528 74.908 1 89.45 ? N6A FAD 300 D 1 
HETATM 19 N N1A FAD . . . S 2 -12.934 -4.449 76.069 1 97.55 ? N1A FAD 300 D 1 
HETATM 20 C C2A FAD . . . S 2 -12.206 -5.045 77.019 1 94.4 ? C2A FAD 300 D 1 
HETATM 21 N N3A FAD . . . S 2 -11.304 -4.507 77.844 1 90.28 ? N3A FAD 300 D 1 
HETATM 22 C C4A FAD . . . S 2 -11.166 -3.194 77.618 1 88.32 ? C4A FAD 300 D 1 
HETATM 23 N N1 FAD . . . S 2 -10.357 5.814 89.837 1 57.23 ? N1 FAD 300 D 1 
HETATM 24 C C2 FAD . . . S 2 -11.428 6.341 90.501 1 63.74 ? C2 FAD 300 D 1 
HETATM 25 O O2 FAD . . . S 2 -12.307 5.616 90.993 1 72.37 ? O2 FAD 300 D 1 
HETATM 26 N N3 FAD . . . S 2 -11.54 7.72 90.625 1 57.99 ? N3 FAD 300 D 1 
HETATM 27 C C4 FAD . . . S 2 -10.634 8.667 90.135 1 57.99 ? C4 FAD 300 D 1 
HETATM 28 O O4 FAD . . . S 2 -10.825 9.876 90.305 1 63.19 ? O4 FAD 300 D 1 
HETATM 29 C C4X FAD . . . S 2 -9.506 8.081 89.442 1 50.29 ? C4X FAD 300 D 1 
HETATM 30 N N5 FAD . . . S 2 -8.593 8.888 88.968 1 53.8 ? N5 FAD 300 D 1 
HETATM 31 C C5X FAD . . . S 2 -7.515 8.321 88.271 1 58.95 ? C5X FAD 300 D 1 
HETATM 32 C C6 FAD . . . S 2 -6.557 9.167 87.695 1 57.93 ? C6 FAD 300 D 1 
HETATM 33 C C7 FAD . . . S 2 -5.464 8.648 87.012 1 51.48 ? C7 FAD 300 D 1 
HETATM 34 C C7M FAD . . . S 2 -4.426 9.587 86.464 1 50.08 ? C7M FAD 300 D 1 
HETATM 35 C C8 FAD . . . S 2 -5.321 7.257 86.883 1 53.48 ? C8 FAD 300 D 1 
HETATM 36 C C8M FAD . . . S 2 -4.13 6.664 86.178 1 54.35 ? C8M FAD 300 D 1 
HETATM 37 C C9 FAD . . . S 2 -6.28 6.41 87.44 1 51.87 ? C9 FAD 300 D 1 
HETATM 38 C C9A FAD . . . S 2 -7.371 6.928 88.132 1 51.5 ? C9A FAD 300 D 1 
HETATM 39 N N10 FAD . . . S 2 -8.383 6.1 88.674 1 54.18 ? N10 FAD 300 D 1 
HETATM 40 C C10 FAD . . . S 2 -9.461 6.643 89.337 1 51.56 ? C10 FAD 300 D 1 
HETATM 41 C C1' FAD . . . S 2 -8.275 4.639 88.613 1 48.69 ? C1' FAD 300 D 1 
HETATM 42 C C2' FAD . . . S 2 -8.948 4.008 87.407 1 62.65 ? C2' FAD 300 D 1 
HETATM 43 O O2' FAD . . . S 2 -10.366 4.182 87.465 1 67.84 ? O2' FAD 300 D 1 
HETATM 44 C C3' FAD . . . S 2 -8.582 2.525 87.4 1 58.97 ? C3' FAD 300 D 1 
HETATM 45 O O3' FAD . . . S 2 -7.2 2.434 87.076 1 52.64 ? O3' FAD 300 D 1 
HETATM 46 C C4' FAD . . . S 2 -9.416 1.587 86.524 1 61.51 ? C4' FAD 300 D 1 
HETATM 47 O O4' FAD . . . S 2 -9.14 0.253 86.956 1 63.46 ? O4' FAD 300 D 1 
HETATM 48 C C5' FAD . . . S 2 -9.177 1.746 85.035 1 62.56 ? C5' FAD 300 D 1 
HETATM 49 O O5' FAD . . . S 2 -9.712 3.016 84.605 1 67.96 ? O5' FAD 300 D 1 
HETATM 50 P P FAD . . . S 2 -9.492 3.555 83.138 1 65.91 ? P FAD 300 D 1 
HETATM 51 O O1P FAD . . . S 2 -10.122 4.948 83.049 1 54.87 ? O1P FAD 300 D 1 
HETATM 52 O O2P FAD . . . S 2 -8.051 3.553 82.75 1 64.17 ? O2P FAD 300 D 1 
HETATM 53 O O3P FAD . . . S 2 -10.332 2.506 82.208 1 72.91 ? O3P FAD 300 D 1 
#
_model_server_stats.io_time_ms              36 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           348 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#