data_5UN1 # _model_server_result.job_id XzIqKJJKcWUW5BqoXaQwvw _model_server_result.datetime_utc '2024-11-21 13:42:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5un1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":1001}' # _entry.id 5UN1 # _exptl.entry_id 5UN1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 486.726 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.44 _cell.angle_gamma 90 _cell.entry_id 5UN1 _cell.length_a 181.57 _cell.length_b 108.47 _cell.length_c 182.46 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UN1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,I,J,K,L,M,N,T,U,V,W 1 1 B,C,G,H,O,P,Q,R,S,X,Y,Z 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 9 _struct_asym.id V _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 27 G CYS 420 1_555 A SG CYS 59 G CYS 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 43 G CYS 436 1_555 A SG CYS 60 G CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf3 A SG CYS 341 G CYS 734 1_555 A SG CYS 395 G CYS 788 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf4 B SG CYS 27 A CYS 420 1_555 B SG CYS 59 A CYS 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 B SG CYS 43 A CYS 436 1_555 B SG CYS 60 A CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf6 B SG CYS 341 A CYS 734 1_555 B SG CYS 395 A CYS 788 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 C SG CYS 27 B CYS 422 1_555 C SG CYS 54 B CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 C SG CYS 34 B CYS 429 1_555 C SG CYS 55 B CYS 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf9 C SG CYS 334 B CYS 729 1_555 C SG CYS 389 B CYS 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf10 D SG CYS 27 H CYS 422 1_555 D SG CYS 54 H CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf11 D SG CYS 34 H CYS 429 1_555 D SG CYS 55 H CYS 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf12 D SG CYS 334 H CYS 729 1_555 D SG CYS 389 H CYS 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf13 E SG CYS 27 E CYS 420 1_555 E SG CYS 59 E CYS 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf14 E SG CYS 43 E CYS 436 1_555 E SG CYS 60 E CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf15 E SG CYS 341 E CYS 734 1_555 E SG CYS 395 E CYS 788 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf16 F SG CYS 27 F CYS 422 1_555 F SG CYS 54 F CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf17 F SG CYS 34 F CYS 429 1_555 F SG CYS 55 F CYS 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf18 F SG CYS 334 F CYS 729 1_555 F SG CYS 389 F CYS 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? disulf ? disulf19 G SG CYS 27 C CYS 420 1_555 G SG CYS 59 C CYS 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf20 G SG CYS 43 C CYS 436 1_555 G SG CYS 60 C CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf21 G SG CYS 341 C CYS 734 1_555 G SG CYS 395 C CYS 788 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf22 H SG CYS 27 D CYS 422 1_555 H SG CYS 54 D CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf23 H SG CYS 34 D CYS 429 1_555 H SG CYS 55 D CYS 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf24 H SG CYS 334 D CYS 729 1_555 H SG CYS 389 D CYS 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 458 n n CBA CAB Y01 sing 459 n n CBA CAN Y01 sing 460 n n CAN CAJ Y01 sing 461 n n CAJ CAO Y01 sing 462 n n CAO CBB Y01 sing 463 n n CBB CAC Y01 sing 464 n n CBB CBE Y01 sing 465 n n CBE CAP Y01 sing 466 n n CBE CBI Y01 sing 467 n n CAP CAQ Y01 sing 468 n n CAQ CBG Y01 sing 469 n n CBG CBI Y01 sing 470 n n CBG CBD Y01 sing 471 n n CBI CAE Y01 sing 472 n n CBI CAU Y01 sing 473 n n CAU CAS Y01 sing 474 n n CAS CBF Y01 sing 475 n n CBF CBD Y01 sing 476 n n CBF CBH Y01 sing 477 n n CBD CAK Y01 sing 478 n n CAK CAI Y01 sing 479 n n CAI CAZ Y01 doub 480 n n CAZ CAV Y01 sing 481 n n CAZ CBH Y01 sing 482 n n CAV CBC Y01 sing 483 n n CBH CAD Y01 sing 484 n n CBH CAT Y01 sing 485 n n CAT CAR Y01 sing 486 n n CAR CBC Y01 sing 487 n n CBC OAW Y01 sing 488 n n OAW CAY Y01 sing 489 n n CAY OAG Y01 doub 490 n n CAY CAM Y01 sing 491 n n CAM CAL Y01 sing 492 n n CAL CAX Y01 sing 493 n n CAX OAH Y01 sing 494 n n CAX OAF Y01 doub 495 n n CAA HAA1 Y01 sing 496 n n CAA HAA2 Y01 sing 497 n n CAA HAA3 Y01 sing 498 n n CBA HBA Y01 sing 499 n n CAB HAB1 Y01 sing 500 n n CAB HAB2 Y01 sing 501 n n CAB HAB3 Y01 sing 502 n n CAN HAN1 Y01 sing 503 n n CAN HAN2 Y01 sing 504 n n CAJ HAJ1 Y01 sing 505 n n CAJ HAJ2 Y01 sing 506 n n CAO HAO1 Y01 sing 507 n n CAO HAO2 Y01 sing 508 n n CBB HBB Y01 sing 509 n n CAC HAC1 Y01 sing 510 n n CAC HAC2 Y01 sing 511 n n CAC HAC3 Y01 sing 512 n n CBE HBE Y01 sing 513 n n CAP HAP1 Y01 sing 514 n n CAP HAP2 Y01 sing 515 n n CAQ HAQ1 Y01 sing 516 n n CAQ HAQ2 Y01 sing 517 n n CBG HBG Y01 sing 518 n n CBD HBD Y01 sing 519 n n CAE HAE1 Y01 sing 520 n n CAE HAE2 Y01 sing 521 n n CAE HAE3 Y01 sing 522 n n CAU HAU1 Y01 sing 523 n n CAU HAU2 Y01 sing 524 n n CAS HAS1 Y01 sing 525 n n CAS HAS2 Y01 sing 526 n n CBF HBF Y01 sing 527 n n CAK HAK1 Y01 sing 528 n n CAK HAK2 Y01 sing 529 n n CAI HAI Y01 sing 530 n n CAV HAV1 Y01 sing 531 n n CAV HAV2 Y01 sing 532 n n CBC HBC Y01 sing 533 n n CAD HAD1 Y01 sing 534 n n CAD HAD2 Y01 sing 535 n n CAD HAD3 Y01 sing 536 n n CAT HAT1 Y01 sing 537 n n CAT HAT2 Y01 sing 538 n n CAR HAR1 Y01 sing 539 n n CAR HAR2 Y01 sing 540 n n CAM HAM1 Y01 sing 541 n n CAM HAM2 Y01 sing 542 n n CAL HAL1 Y01 sing 543 n n CAL HAL2 Y01 sing 544 n n OAH HAH Y01 sing 545 n n # _atom_sites.entry_id 5UN1 _atom_sites.fract_transf_matrix[1][1] 0.005508 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002163 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009219 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005888 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 GLY G 1 1001 1001 GLY GLY . J 4 NAG G 1 1002 1002 NAG NAG . K 5 TRS G 1 1003 1004 TRS TRS . L 6 GLU G 1 1004 1005 GLU GLU . M 7 BMK G 1 1005 1003 BMK MK . N 6 GLU G 1 1006 1004 GLU GLU . O 8 MG A 1 901 1003 MG MG . P 3 GLY A 1 902 1001 GLY GLY . Q 6 GLU B 1 1001 1001 GLU GLU . R 4 NAG B 1 1002 1002 NAG NAG . S 7 BMK B 1 1003 1003 BMK MK . T 6 GLU H 1 1001 1001 GLU GLU . U 4 NAG H 1 1002 1002 NAG NAG . V 9 Y01 E 1 1001 1001 Y01 Y01 . W 4 NAG F 1 1001 1001 NAG NAG . X 4 NAG D 1 1001 1001 NAG NAG . Y 6 GLU D 1 1002 1001 GLU GLU . Z 4 NAG D 1 1003 1002 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . V 9 -25.384 -31.449 54.483 1 105.61 ? CAA Y01 1001 E 1 HETATM 2 C CBA Y01 . . . V 9 -24.509 -32.403 55.315 1 100.8 ? CBA Y01 1001 E 1 HETATM 3 C CAB Y01 . . . V 9 -25.099 -32.715 56.709 1 66.91 ? CAB Y01 1001 E 1 HETATM 4 C CAN Y01 . . . V 9 -24.27 -33.7 54.48 1 112.9 ? CAN Y01 1001 E 1 HETATM 5 C CAJ Y01 . . . V 9 -25.463 -34.688 54.648 1 162.51 ? CAJ Y01 1001 E 1 HETATM 6 C CAO Y01 . . . V 9 -24.951 -36.065 55.201 1 165.43 ? CAO Y01 1001 E 1 HETATM 7 C CBB Y01 . . . V 9 -26.096 -37.211 54.988 1 161.41 ? CBB Y01 1001 E 1 HETATM 8 C CAC Y01 . . . V 9 -27.482 -36.528 55.386 1 105.78 ? CAC Y01 1001 E 1 HETATM 9 C CBE Y01 . . . V 9 -25.868 -37.851 53.741 1 162.7 ? CBE Y01 1001 E 1 HETATM 10 C CAP Y01 . . . V 9 -25.699 -39.46 53.936 1 149.85 ? CAP Y01 1001 E 1 HETATM 11 C CAQ Y01 . . . V 9 -26.022 -40.2 52.306 1 101.93 ? CAQ Y01 1001 E 1 HETATM 12 C CBG Y01 . . . V 9 -26.356 -38.853 51.309 1 132.7 ? CBG Y01 1001 E 1 HETATM 13 C CBI Y01 . . . V 9 -26.986 -37.791 52.416 1 155.87 ? CBI Y01 1001 E 1 HETATM 14 C CAE Y01 . . . V 9 -28.313 -38.529 52.863 1 138.57 ? CAE Y01 1001 E 1 HETATM 15 C CAU Y01 . . . V 9 -27.264 -36.689 51.908 1 158.44 ? CAU Y01 1001 E 1 HETATM 16 C CAS Y01 . . . V 9 -27.747 -36.68 50.847 1 164.84 ? CAS Y01 1001 E 1 HETATM 17 C CBF Y01 . . . V 9 -27.21 -37.757 49.842 1 172.69 ? CBF Y01 1001 E 1 HETATM 18 C CBD Y01 . . . V 9 -26.908 -38.932 50.475 1 156.42 ? CBD Y01 1001 E 1 HETATM 19 C CAK Y01 . . . V 9 -26.556 -39.874 49.703 1 166.66 ? CAK Y01 1001 E 1 HETATM 20 C CAI Y01 . . . V 9 -27.637 -40.061 48.44 1 144.34 ? CAI Y01 1001 E 1 HETATM 21 C CAZ Y01 . . . V 9 -28.094 -38.867 47.842 1 143.62 ? CAZ Y01 1001 E 1 HETATM 22 C CAV Y01 . . . V 9 -27.255 -38.313 46.622 1 131.11 ? CAV Y01 1001 E 1 HETATM 23 C CBH Y01 . . . V 9 -28.445 -37.955 48.688 1 168.85 ? CBH Y01 1001 E 1 HETATM 24 C CAD Y01 . . . V 9 -29.696 -38.433 49.441 1 179.31 ? CAD Y01 1001 E 1 HETATM 25 C CAT Y01 . . . V 9 -28.823 -36.427 48.125 1 135.73 ? CAT Y01 1001 E 1 HETATM 26 C CAR Y01 . . . V 9 -28.107 -36.053 46.847 1 143.09 ? CAR Y01 1001 E 1 HETATM 27 C CBC Y01 . . . V 9 -28.04 -37.118 45.977 1 158.22 ? CBC Y01 1001 E 1 HETATM 28 O OAW Y01 . . . V 9 -29.401 -37.682 45.6 1 155.92 ? OAW Y01 1001 E 1 HETATM 29 C CAY Y01 . . . V 9 -29.459 -38.184 44.245 1 172.04 ? CAY Y01 1001 E 1 HETATM 30 O OAG Y01 . . . V 9 -28.438 -38.465 43.692 1 179.08 ? OAG Y01 1001 E 1 HETATM 31 C CAM Y01 . . . V 9 -30.802 -38.315 43.455 1 166.58 ? CAM Y01 1001 E 1 HETATM 32 C CAL Y01 . . . V 9 -31.223 -39.723 42.961 1 152.73 ? CAL Y01 1001 E 1 HETATM 33 C CAX Y01 . . . V 9 -32.036 -40.346 44.111 1 161.97 ? CAX Y01 1001 E 1 HETATM 34 O OAH Y01 . . . V 9 -32.846 -39.634 44.814 1 141.12 -1 OAH Y01 1001 E 1 HETATM 35 O OAF Y01 . . . V 9 -31.843 -41.583 44.35 1 125.55 ? OAF Y01 1001 E 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 35 #