data_5UNR # _model_server_result.job_id pKUPhVju2weQUL3J6gQ7Mw _model_server_result.datetime_utc '2024-11-27 18:00:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5unr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":802}' # _entry.id 5UNR # _exptl.entry_id 5UNR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 241.247 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 5,6,7,8-TETRAHYDROBIOPTERIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5UNR _cell.length_a 51.75 _cell.length_b 111.22 _cell.length_c 164.58 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UNR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 G ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc2 A SG CYS 35 A CYS 331 1_555 G ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc3 A SG CYS 119 A CYS 415 1_555 C FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc4 G ZN ZN . A ZN 805 1_555 B SG CYS 30 B CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc5 G ZN ZN . A ZN 805 1_555 B SG CYS 35 B CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc6 B SG CYS 119 B CYS 415 1_555 H FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? # _chem_comp.formula 'C9 H15 N5 O3' _chem_comp.formula_weight 241.247 _chem_comp.id H4B _chem_comp.mon_nstd_flag . _chem_comp.name 5,6,7,8-TETRAHYDROBIOPTERIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 H4B doub 179 n y N1 C8A H4B sing 180 n y C2 N2 H4B sing 181 n n C2 N3 H4B sing 182 n y N2 HN21 H4B sing 183 n n N2 HN22 H4B sing 184 n n N3 C4 H4B sing 185 n y N3 HN3 H4B sing 186 n n C4 O4 H4B doub 187 n n C4 C4A H4B sing 188 n y C4A C8A H4B doub 189 n y C4A N5 H4B sing 190 n n C8A N8 H4B sing 191 n n N5 C6 H4B sing 192 n n N5 HN5 H4B sing 193 n n N8 C7 H4B sing 194 n n N8 HN8 H4B sing 195 n n C6 C7 H4B sing 196 n n C6 C9 H4B sing 197 n n C6 H6 H4B sing 198 n n C7 H71 H4B sing 199 n n C7 H72 H4B sing 200 n n C9 O9 H4B sing 201 n n C9 C10 H4B sing 202 n n C9 H9 H4B sing 203 n n O9 HO9 H4B sing 204 n n C10 C11 H4B sing 205 n n C10 O10 H4B sing 206 n n C10 H10 H4B sing 207 n n C11 H111 H4B sing 208 n n C11 H112 H4B sing 209 n n C11 H113 H4B sing 210 n n O10 HO0 H4B sing 211 n n # _atom_sites.entry_id 5UNR _atom_sites.fract_transf_matrix[1][1] 0.019324 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008991 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006076 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 801 750 HEM HEM . D 3 H4B A 1 802 760 H4B BH4 . E 4 8EV A 1 803 800 8EV M23 . F 5 ACT A 1 804 860 ACT ACT . G 6 ZN A 1 805 900 ZN ZN . H 2 HEM B 1 801 750 HEM HEM . I 3 H4B B 1 802 760 H4B BH4 . J 4 8EV B 1 803 800 8EV M23 . K 5 ACT B 1 804 860 ACT ACT . L 7 HOH A 1 901 134 HOH HOH . L 7 HOH A 2 902 176 HOH HOH . L 7 HOH A 3 903 193 HOH HOH . L 7 HOH A 4 904 116 HOH HOH . L 7 HOH A 5 905 171 HOH HOH . L 7 HOH A 6 906 187 HOH HOH . L 7 HOH A 7 907 196 HOH HOH . L 7 HOH A 8 908 195 HOH HOH . L 7 HOH A 9 909 64 HOH HOH . L 7 HOH A 10 910 192 HOH HOH . L 7 HOH A 11 911 189 HOH HOH . L 7 HOH A 12 912 3 HOH HOH . L 7 HOH A 13 913 126 HOH HOH . L 7 HOH A 14 914 56 HOH HOH . L 7 HOH A 15 915 180 HOH HOH . L 7 HOH A 16 916 71 HOH HOH . L 7 HOH A 17 917 18 HOH HOH . L 7 HOH A 18 918 186 HOH HOH . L 7 HOH A 19 919 130 HOH HOH . L 7 HOH A 20 920 15 HOH HOH . L 7 HOH A 21 921 59 HOH HOH . L 7 HOH A 22 922 188 HOH HOH . L 7 HOH A 23 923 40 HOH HOH . L 7 HOH A 24 924 123 HOH HOH . L 7 HOH A 25 925 191 HOH HOH . L 7 HOH A 26 926 117 HOH HOH . L 7 HOH A 27 927 141 HOH HOH . L 7 HOH A 28 928 169 HOH HOH . L 7 HOH A 29 929 199 HOH HOH . L 7 HOH A 30 930 115 HOH HOH . L 7 HOH A 31 931 133 HOH HOH . L 7 HOH A 32 932 121 HOH HOH . L 7 HOH A 33 933 194 HOH HOH . L 7 HOH A 34 934 101 HOH HOH . L 7 HOH A 35 935 24 HOH HOH . L 7 HOH A 36 936 26 HOH HOH . L 7 HOH A 37 937 190 HOH HOH . L 7 HOH A 38 938 158 HOH HOH . L 7 HOH A 39 939 118 HOH HOH . L 7 HOH A 40 940 170 HOH HOH . L 7 HOH A 41 941 45 HOH HOH . L 7 HOH A 42 942 82 HOH HOH . L 7 HOH A 43 943 107 HOH HOH . L 7 HOH A 44 944 31 HOH HOH . L 7 HOH A 45 945 69 HOH HOH . L 7 HOH A 46 946 157 HOH HOH . L 7 HOH A 47 947 41 HOH HOH . L 7 HOH A 48 948 65 HOH HOH . L 7 HOH A 49 949 7 HOH HOH . L 7 HOH A 50 950 1 HOH HOH . L 7 HOH A 51 951 5 HOH HOH . L 7 HOH A 52 952 16 HOH HOH . L 7 HOH A 53 953 61 HOH HOH . L 7 HOH A 54 954 10 HOH HOH . L 7 HOH A 55 955 105 HOH HOH . L 7 HOH A 56 956 49 HOH HOH . L 7 HOH A 57 957 104 HOH HOH . L 7 HOH A 58 958 29 HOH HOH . L 7 HOH A 59 959 81 HOH HOH . L 7 HOH A 60 960 34 HOH HOH . L 7 HOH A 61 961 37 HOH HOH . L 7 HOH A 62 962 50 HOH HOH . L 7 HOH A 63 963 168 HOH HOH . L 7 HOH A 64 964 167 HOH HOH . L 7 HOH A 65 965 68 HOH HOH . L 7 HOH A 66 966 23 HOH HOH . L 7 HOH A 67 967 179 HOH HOH . L 7 HOH A 68 968 46 HOH HOH . L 7 HOH A 69 969 185 HOH HOH . L 7 HOH A 70 970 150 HOH HOH . L 7 HOH A 71 971 156 HOH HOH . L 7 HOH A 72 972 182 HOH HOH . L 7 HOH A 73 973 89 HOH HOH . L 7 HOH A 74 974 92 HOH HOH . L 7 HOH A 75 975 47 HOH HOH . L 7 HOH A 76 976 88 HOH HOH . L 7 HOH A 77 977 139 HOH HOH . L 7 HOH A 78 978 102 HOH HOH . L 7 HOH A 79 979 90 HOH HOH . L 7 HOH A 80 980 98 HOH HOH . L 7 HOH A 81 981 94 HOH HOH . L 7 HOH A 82 982 181 HOH HOH . L 7 HOH A 83 983 146 HOH HOH . L 7 HOH A 84 984 153 HOH HOH . L 7 HOH A 85 985 131 HOH HOH . L 7 HOH A 86 986 100 HOH HOH . L 7 HOH A 87 987 60 HOH HOH . L 7 HOH A 88 988 159 HOH HOH . L 7 HOH A 89 989 177 HOH HOH . L 7 HOH A 90 990 149 HOH HOH . L 7 HOH A 91 991 74 HOH HOH . L 7 HOH A 92 992 178 HOH HOH . L 7 HOH A 93 993 184 HOH HOH . L 7 HOH A 94 994 103 HOH HOH . M 7 HOH B 1 901 202 HOH HOH . M 7 HOH B 2 902 197 HOH HOH . M 7 HOH B 3 903 198 HOH HOH . M 7 HOH B 4 904 164 HOH HOH . M 7 HOH B 5 905 200 HOH HOH . M 7 HOH B 6 906 162 HOH HOH . M 7 HOH B 7 907 99 HOH HOH . M 7 HOH B 8 908 207 HOH HOH . M 7 HOH B 9 909 19 HOH HOH . M 7 HOH B 10 910 204 HOH HOH . M 7 HOH B 11 911 122 HOH HOH . M 7 HOH B 12 912 75 HOH HOH . M 7 HOH B 13 913 43 HOH HOH . M 7 HOH B 14 914 55 HOH HOH . M 7 HOH B 15 915 35 HOH HOH . M 7 HOH B 16 916 219 HOH HOH . M 7 HOH B 17 917 32 HOH HOH . M 7 HOH B 18 918 67 HOH HOH . M 7 HOH B 19 919 95 HOH HOH . M 7 HOH B 20 920 12 HOH HOH . M 7 HOH B 21 921 174 HOH HOH . M 7 HOH B 22 922 120 HOH HOH . M 7 HOH B 23 923 119 HOH HOH . M 7 HOH B 24 924 106 HOH HOH . M 7 HOH B 25 925 84 HOH HOH . M 7 HOH B 26 926 14 HOH HOH . M 7 HOH B 27 927 22 HOH HOH . M 7 HOH B 28 928 66 HOH HOH . M 7 HOH B 29 929 39 HOH HOH . M 7 HOH B 30 930 42 HOH HOH . M 7 HOH B 31 931 11 HOH HOH . M 7 HOH B 32 932 30 HOH HOH . M 7 HOH B 33 933 125 HOH HOH . M 7 HOH B 34 934 57 HOH HOH . M 7 HOH B 35 935 163 HOH HOH . M 7 HOH B 36 936 147 HOH HOH . M 7 HOH B 37 937 87 HOH HOH . M 7 HOH B 38 938 97 HOH HOH . M 7 HOH B 39 939 53 HOH HOH . M 7 HOH B 40 940 4 HOH HOH . M 7 HOH B 41 941 201 HOH HOH . M 7 HOH B 42 942 80 HOH HOH . M 7 HOH B 43 943 210 HOH HOH . M 7 HOH B 44 944 86 HOH HOH . M 7 HOH B 45 945 208 HOH HOH . M 7 HOH B 46 946 21 HOH HOH . M 7 HOH B 47 947 175 HOH HOH . M 7 HOH B 48 948 91 HOH HOH . M 7 HOH B 49 949 51 HOH HOH . M 7 HOH B 50 950 38 HOH HOH . M 7 HOH B 51 951 44 HOH HOH . M 7 HOH B 52 952 13 HOH HOH . M 7 HOH B 53 953 148 HOH HOH . M 7 HOH B 54 954 27 HOH HOH . M 7 HOH B 55 955 17 HOH HOH . M 7 HOH B 56 956 8 HOH HOH . M 7 HOH B 57 957 108 HOH HOH . M 7 HOH B 58 958 33 HOH HOH . M 7 HOH B 59 959 6 HOH HOH . M 7 HOH B 60 960 128 HOH HOH . M 7 HOH B 61 961 211 HOH HOH . M 7 HOH B 62 962 62 HOH HOH . M 7 HOH B 63 963 52 HOH HOH . M 7 HOH B 64 964 25 HOH HOH . M 7 HOH B 65 965 209 HOH HOH . M 7 HOH B 66 966 76 HOH HOH . M 7 HOH B 67 967 77 HOH HOH . M 7 HOH B 68 968 85 HOH HOH . M 7 HOH B 69 969 58 HOH HOH . M 7 HOH B 70 970 2 HOH HOH . M 7 HOH B 71 971 166 HOH HOH . M 7 HOH B 72 972 73 HOH HOH . M 7 HOH B 73 973 72 HOH HOH . M 7 HOH B 74 974 93 HOH HOH . M 7 HOH B 75 975 129 HOH HOH . M 7 HOH B 76 976 9 HOH HOH . M 7 HOH B 77 977 160 HOH HOH . M 7 HOH B 78 978 110 HOH HOH . M 7 HOH B 79 979 132 HOH HOH . M 7 HOH B 80 980 215 HOH HOH . M 7 HOH B 81 981 54 HOH HOH . M 7 HOH B 82 982 63 HOH HOH . M 7 HOH B 83 983 151 HOH HOH . M 7 HOH B 84 984 112 HOH HOH . M 7 HOH B 85 985 79 HOH HOH . M 7 HOH B 86 986 28 HOH HOH . M 7 HOH B 87 987 135 HOH HOH . M 7 HOH B 88 988 214 HOH HOH . M 7 HOH B 89 989 213 HOH HOH . M 7 HOH B 90 990 96 HOH HOH . M 7 HOH B 91 991 154 HOH HOH . M 7 HOH B 92 992 161 HOH HOH . M 7 HOH B 93 993 173 HOH HOH . M 7 HOH B 94 994 48 HOH HOH . M 7 HOH B 95 995 20 HOH HOH . M 7 HOH B 96 996 137 HOH HOH . M 7 HOH B 97 997 140 HOH HOH . M 7 HOH B 98 998 124 HOH HOH . M 7 HOH B 99 999 127 HOH HOH . M 7 HOH B 100 1000 136 HOH HOH . M 7 HOH B 101 1001 218 HOH HOH . M 7 HOH B 102 1002 216 HOH HOH . M 7 HOH B 103 1003 70 HOH HOH . M 7 HOH B 104 1004 165 HOH HOH . M 7 HOH B 105 1005 111 HOH HOH . M 7 HOH B 106 1006 138 HOH HOH . M 7 HOH B 107 1007 145 HOH HOH . M 7 HOH B 108 1008 155 HOH HOH . M 7 HOH B 109 1009 83 HOH HOH . M 7 HOH B 110 1010 144 HOH HOH . M 7 HOH B 111 1011 212 HOH HOH . M 7 HOH B 112 1012 220 HOH HOH . M 7 HOH B 113 1013 78 HOH HOH . M 7 HOH B 114 1014 183 HOH HOH . M 7 HOH B 115 1015 109 HOH HOH . M 7 HOH B 116 1016 113 HOH HOH . M 7 HOH B 117 1017 36 HOH HOH . M 7 HOH B 118 1018 205 HOH HOH . M 7 HOH B 119 1019 143 HOH HOH . M 7 HOH B 120 1020 203 HOH HOH . M 7 HOH B 121 1021 206 HOH HOH . M 7 HOH B 122 1022 142 HOH HOH . M 7 HOH B 123 1023 217 HOH HOH . M 7 HOH B 124 1024 172 HOH HOH . M 7 HOH B 125 1025 114 HOH HOH . M 7 HOH B 126 1026 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 H4B . . . D 3 9.766 2.712 34.204 1 48.14 ? N1 H4B 802 A 1 HETATM 2 C C2 H4B . . . D 3 9.976 2.271 32.937 1 47.86 ? C2 H4B 802 A 1 HETATM 3 N N2 H4B . . . D 3 11.25 2.154 32.476 1 44.81 ? N2 H4B 802 A 1 HETATM 4 N N3 H4B . . . D 3 8.928 1.949 32.142 1 47.75 ? N3 H4B 802 A 1 HETATM 5 C C4 H4B . . . D 3 7.659 2.064 32.591 1 48.4 ? C4 H4B 802 A 1 HETATM 6 O O4 H4B . . . D 3 6.697 1.764 31.85 1 48.16 ? O4 H4B 802 A 1 HETATM 7 C C4A H4B . . . D 3 7.431 2.525 33.878 1 40.68 ? C4A H4B 802 A 1 HETATM 8 C C8A H4B . . . D 3 8.514 2.843 34.684 1 40.24 ? C8A H4B 802 A 1 HETATM 9 N N5 H4B . . . D 3 6.177 2.655 34.355 1 45.73 ? N5 H4B 802 A 1 HETATM 10 N N8 H4B . . . D 3 8.347 3.294 35.952 1 42.57 ? N8 H4B 802 A 1 HETATM 11 C C6 H4B . . . D 3 6.009 3.622 35.435 1 46.25 ? C6 H4B 802 A 1 HETATM 12 C C7 H4B . . . D 3 7.025 3.382 36.536 1 34.66 ? C7 H4B 802 A 1 HETATM 13 C C9 H4B . . . D 3 4.627 3.575 36.061 1 49.26 ? C9 H4B 802 A 1 HETATM 14 O O9 H4B . . . D 3 4.358 2.223 36.444 1 44.21 ? O9 H4B 802 A 1 HETATM 15 C C10 H4B . . . D 3 4.585 4.487 37.293 1 53.38 ? C10 H4B 802 A 1 HETATM 16 C C11 H4B . . . D 3 3.321 4.259 38.096 1 55.96 ? C11 H4B 802 A 1 HETATM 17 O O10 H4B . . . D 3 4.627 5.867 36.904 1 56.36 ? O10 H4B 802 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #