data_5UNV # _model_server_result.job_id TFbj56lVMA8ngb2Swu8gMQ _model_server_result.datetime_utc '2024-11-17 15:49:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5unv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":802}' # _entry.id 5UNV # _exptl.entry_id 5UNV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 241.247 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5,6,7,8-TETRAHYDROBIOPTERIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5UNV _cell.length_a 51.74 _cell.length_b 111.33 _cell.length_c 164.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UNV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 G ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc2 A SG CYS 35 A CYS 331 1_555 G ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc3 A SG CYS 119 A CYS 415 1_555 C FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc4 G ZN ZN . A ZN 805 1_555 B SG CYS 30 B CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc5 G ZN ZN . A ZN 805 1_555 B SG CYS 35 B CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc6 B SG CYS 119 B CYS 415 1_555 H FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? # _chem_comp.formula 'C9 H15 N5 O3' _chem_comp.formula_weight 241.247 _chem_comp.id H4B _chem_comp.mon_nstd_flag . _chem_comp.name 5,6,7,8-TETRAHYDROBIOPTERIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 H4B doub 183 n y N1 C8A H4B sing 184 n y C2 N2 H4B sing 185 n n C2 N3 H4B sing 186 n y N2 HN21 H4B sing 187 n n N2 HN22 H4B sing 188 n n N3 C4 H4B sing 189 n y N3 HN3 H4B sing 190 n n C4 O4 H4B doub 191 n n C4 C4A H4B sing 192 n y C4A C8A H4B doub 193 n y C4A N5 H4B sing 194 n n C8A N8 H4B sing 195 n n N5 C6 H4B sing 196 n n N5 HN5 H4B sing 197 n n N8 C7 H4B sing 198 n n N8 HN8 H4B sing 199 n n C6 C7 H4B sing 200 n n C6 C9 H4B sing 201 n n C6 H6 H4B sing 202 n n C7 H71 H4B sing 203 n n C7 H72 H4B sing 204 n n C9 O9 H4B sing 205 n n C9 C10 H4B sing 206 n n C9 H9 H4B sing 207 n n O9 HO9 H4B sing 208 n n C10 C11 H4B sing 209 n n C10 O10 H4B sing 210 n n C10 H10 H4B sing 211 n n C11 H111 H4B sing 212 n n C11 H112 H4B sing 213 n n C11 H113 H4B sing 214 n n O10 HO0 H4B sing 215 n n # _atom_sites.entry_id 5UNV _atom_sites.fract_transf_matrix[1][1] 0.019327 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008982 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006075 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 801 750 HEM HEM . D 3 H4B A 1 802 760 H4B BH4 . E 4 8J7 A 1 803 800 8J7 M90 . F 5 ACT A 1 804 860 ACT ACT . G 6 ZN A 1 805 900 ZN ZN . H 2 HEM B 1 801 750 HEM HEM . I 3 H4B B 1 802 760 H4B BH4 . J 4 8J7 B 1 803 800 8J7 M90 . K 5 ACT B 1 804 860 ACT ACT . L 7 HOH A 1 901 190 HOH HOH . L 7 HOH A 2 902 15 HOH HOH . L 7 HOH A 3 903 176 HOH HOH . L 7 HOH A 4 904 179 HOH HOH . L 7 HOH A 5 905 184 HOH HOH . L 7 HOH A 6 906 18 HOH HOH . L 7 HOH A 7 907 189 HOH HOH . L 7 HOH A 8 908 182 HOH HOH . L 7 HOH A 9 909 180 HOH HOH . L 7 HOH A 10 910 40 HOH HOH . L 7 HOH A 11 911 63 HOH HOH . L 7 HOH A 12 912 97 HOH HOH . L 7 HOH A 13 913 1 HOH HOH . L 7 HOH A 14 914 188 HOH HOH . L 7 HOH A 15 915 80 HOH HOH . L 7 HOH A 16 916 101 HOH HOH . L 7 HOH A 17 917 38 HOH HOH . L 7 HOH A 18 918 47 HOH HOH . L 7 HOH A 19 919 187 HOH HOH . L 7 HOH A 20 920 23 HOH HOH . L 7 HOH A 21 921 73 HOH HOH . L 7 HOH A 22 922 42 HOH HOH . L 7 HOH A 23 923 35 HOH HOH . L 7 HOH A 24 924 3 HOH HOH . L 7 HOH A 25 925 131 HOH HOH . L 7 HOH A 26 926 185 HOH HOH . L 7 HOH A 27 927 72 HOH HOH . L 7 HOH A 28 928 119 HOH HOH . L 7 HOH A 29 929 12 HOH HOH . L 7 HOH A 30 930 28 HOH HOH . L 7 HOH A 31 931 92 HOH HOH . L 7 HOH A 32 932 48 HOH HOH . L 7 HOH A 33 933 11 HOH HOH . L 7 HOH A 34 934 54 HOH HOH . L 7 HOH A 35 935 138 HOH HOH . L 7 HOH A 36 936 67 HOH HOH . L 7 HOH A 37 937 51 HOH HOH . L 7 HOH A 38 938 76 HOH HOH . L 7 HOH A 39 939 106 HOH HOH . L 7 HOH A 40 940 30 HOH HOH . L 7 HOH A 41 941 68 HOH HOH . L 7 HOH A 42 942 171 HOH HOH . L 7 HOH A 43 943 105 HOH HOH . L 7 HOH A 44 944 153 HOH HOH . L 7 HOH A 45 945 53 HOH HOH . L 7 HOH A 46 946 132 HOH HOH . L 7 HOH A 47 947 136 HOH HOH . L 7 HOH A 48 948 17 HOH HOH . L 7 HOH A 49 949 65 HOH HOH . L 7 HOH A 50 950 52 HOH HOH . L 7 HOH A 51 951 175 HOH HOH . L 7 HOH A 52 952 55 HOH HOH . L 7 HOH A 53 953 165 HOH HOH . L 7 HOH A 54 954 50 HOH HOH . L 7 HOH A 55 955 139 HOH HOH . L 7 HOH A 56 956 79 HOH HOH . L 7 HOH A 57 957 155 HOH HOH . L 7 HOH A 58 958 86 HOH HOH . L 7 HOH A 59 959 39 HOH HOH . L 7 HOH A 60 960 59 HOH HOH . L 7 HOH A 61 961 58 HOH HOH . L 7 HOH A 62 962 186 HOH HOH . L 7 HOH A 63 963 69 HOH HOH . L 7 HOH A 64 964 62 HOH HOH . L 7 HOH A 65 965 36 HOH HOH . L 7 HOH A 66 966 103 HOH HOH . L 7 HOH A 67 967 183 HOH HOH . L 7 HOH A 68 968 90 HOH HOH . L 7 HOH A 69 969 108 HOH HOH . L 7 HOH A 70 970 112 HOH HOH . L 7 HOH A 71 971 177 HOH HOH . L 7 HOH A 72 972 193 HOH HOH . L 7 HOH A 73 973 200 HOH HOH . L 7 HOH A 74 974 126 HOH HOH . L 7 HOH A 75 975 167 HOH HOH . L 7 HOH A 76 976 96 HOH HOH . L 7 HOH A 77 977 75 HOH HOH . L 7 HOH A 78 978 114 HOH HOH . L 7 HOH A 79 979 178 HOH HOH . L 7 HOH A 80 980 21 HOH HOH . L 7 HOH A 81 981 27 HOH HOH . L 7 HOH A 82 982 137 HOH HOH . L 7 HOH A 83 983 161 HOH HOH . L 7 HOH A 84 984 147 HOH HOH . L 7 HOH A 85 985 113 HOH HOH . L 7 HOH A 86 986 163 HOH HOH . L 7 HOH A 87 987 133 HOH HOH . L 7 HOH A 88 988 57 HOH HOH . L 7 HOH A 89 989 166 HOH HOH . L 7 HOH A 90 990 87 HOH HOH . L 7 HOH A 91 991 152 HOH HOH . L 7 HOH A 92 992 83 HOH HOH . L 7 HOH A 93 993 98 HOH HOH . M 7 HOH B 1 901 215 HOH HOH . M 7 HOH B 2 902 192 HOH HOH . M 7 HOH B 3 903 174 HOH HOH . M 7 HOH B 4 904 191 HOH HOH . M 7 HOH B 5 905 143 HOH HOH . M 7 HOH B 6 906 85 HOH HOH . M 7 HOH B 7 907 195 HOH HOH . M 7 HOH B 8 908 127 HOH HOH . M 7 HOH B 9 909 172 HOH HOH . M 7 HOH B 10 910 56 HOH HOH . M 7 HOH B 11 911 194 HOH HOH . M 7 HOH B 12 912 91 HOH HOH . M 7 HOH B 13 913 16 HOH HOH . M 7 HOH B 14 914 22 HOH HOH . M 7 HOH B 15 915 205 HOH HOH . M 7 HOH B 16 916 19 HOH HOH . M 7 HOH B 17 917 41 HOH HOH . M 7 HOH B 18 918 49 HOH HOH . M 7 HOH B 19 919 34 HOH HOH . M 7 HOH B 20 920 4 HOH HOH . M 7 HOH B 21 921 118 HOH HOH . M 7 HOH B 22 922 60 HOH HOH . M 7 HOH B 23 923 128 HOH HOH . M 7 HOH B 24 924 7 HOH HOH . M 7 HOH B 25 925 2 HOH HOH . M 7 HOH B 26 926 198 HOH HOH . M 7 HOH B 27 927 10 HOH HOH . M 7 HOH B 28 928 209 HOH HOH . M 7 HOH B 29 929 29 HOH HOH . M 7 HOH B 30 930 95 HOH HOH . M 7 HOH B 31 931 160 HOH HOH . M 7 HOH B 32 932 61 HOH HOH . M 7 HOH B 33 933 64 HOH HOH . M 7 HOH B 34 934 130 HOH HOH . M 7 HOH B 35 935 26 HOH HOH . M 7 HOH B 36 936 125 HOH HOH . M 7 HOH B 37 937 207 HOH HOH . M 7 HOH B 38 938 170 HOH HOH . M 7 HOH B 39 939 37 HOH HOH . M 7 HOH B 40 940 211 HOH HOH . M 7 HOH B 41 941 20 HOH HOH . M 7 HOH B 42 942 122 HOH HOH . M 7 HOH B 43 943 78 HOH HOH . M 7 HOH B 44 944 25 HOH HOH . M 7 HOH B 45 945 33 HOH HOH . M 7 HOH B 46 946 74 HOH HOH . M 7 HOH B 47 947 8 HOH HOH . M 7 HOH B 48 948 43 HOH HOH . M 7 HOH B 49 949 77 HOH HOH . M 7 HOH B 50 950 44 HOH HOH . M 7 HOH B 51 951 24 HOH HOH . M 7 HOH B 52 952 158 HOH HOH . M 7 HOH B 53 953 13 HOH HOH . M 7 HOH B 54 954 102 HOH HOH . M 7 HOH B 55 955 206 HOH HOH . M 7 HOH B 56 956 6 HOH HOH . M 7 HOH B 57 957 124 HOH HOH . M 7 HOH B 58 958 219 HOH HOH . M 7 HOH B 59 959 66 HOH HOH . M 7 HOH B 60 960 146 HOH HOH . M 7 HOH B 61 961 70 HOH HOH . M 7 HOH B 62 962 150 HOH HOH . M 7 HOH B 63 963 46 HOH HOH . M 7 HOH B 64 964 116 HOH HOH . M 7 HOH B 65 965 111 HOH HOH . M 7 HOH B 66 966 214 HOH HOH . M 7 HOH B 67 967 213 HOH HOH . M 7 HOH B 68 968 117 HOH HOH . M 7 HOH B 69 969 210 HOH HOH . M 7 HOH B 70 970 129 HOH HOH . M 7 HOH B 71 971 89 HOH HOH . M 7 HOH B 72 972 14 HOH HOH . M 7 HOH B 73 973 197 HOH HOH . M 7 HOH B 74 974 31 HOH HOH . M 7 HOH B 75 975 5 HOH HOH . M 7 HOH B 76 976 169 HOH HOH . M 7 HOH B 77 977 32 HOH HOH . M 7 HOH B 78 978 84 HOH HOH . M 7 HOH B 79 979 145 HOH HOH . M 7 HOH B 80 980 9 HOH HOH . M 7 HOH B 81 981 104 HOH HOH . M 7 HOH B 82 982 151 HOH HOH . M 7 HOH B 83 983 107 HOH HOH . M 7 HOH B 84 984 164 HOH HOH . M 7 HOH B 85 985 140 HOH HOH . M 7 HOH B 86 986 71 HOH HOH . M 7 HOH B 87 987 88 HOH HOH . M 7 HOH B 88 988 109 HOH HOH . M 7 HOH B 89 989 45 HOH HOH . M 7 HOH B 90 990 94 HOH HOH . M 7 HOH B 91 991 220 HOH HOH . M 7 HOH B 92 992 82 HOH HOH . M 7 HOH B 93 993 199 HOH HOH . M 7 HOH B 94 994 141 HOH HOH . M 7 HOH B 95 995 120 HOH HOH . M 7 HOH B 96 996 148 HOH HOH . M 7 HOH B 97 997 181 HOH HOH . M 7 HOH B 98 998 168 HOH HOH . M 7 HOH B 99 999 203 HOH HOH . M 7 HOH B 100 1000 100 HOH HOH . M 7 HOH B 101 1001 93 HOH HOH . M 7 HOH B 102 1002 173 HOH HOH . M 7 HOH B 103 1003 115 HOH HOH . M 7 HOH B 104 1004 218 HOH HOH . M 7 HOH B 105 1005 142 HOH HOH . M 7 HOH B 106 1006 121 HOH HOH . M 7 HOH B 107 1007 159 HOH HOH . M 7 HOH B 108 1008 156 HOH HOH . M 7 HOH B 109 1009 212 HOH HOH . M 7 HOH B 110 1010 135 HOH HOH . M 7 HOH B 111 1011 110 HOH HOH . M 7 HOH B 112 1012 81 HOH HOH . M 7 HOH B 113 1013 123 HOH HOH . M 7 HOH B 114 1014 134 HOH HOH . M 7 HOH B 115 1015 204 HOH HOH . M 7 HOH B 116 1016 162 HOH HOH . M 7 HOH B 117 1017 216 HOH HOH . M 7 HOH B 118 1018 201 HOH HOH . M 7 HOH B 119 1019 196 HOH HOH . M 7 HOH B 120 1020 202 HOH HOH . M 7 HOH B 121 1021 208 HOH HOH . M 7 HOH B 122 1022 149 HOH HOH . M 7 HOH B 123 1023 157 HOH HOH . M 7 HOH B 124 1024 99 HOH HOH . M 7 HOH B 125 1025 217 HOH HOH . M 7 HOH B 126 1026 154 HOH HOH . M 7 HOH B 127 1027 144 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 H4B . . . I 3 14.358 3.301 48.338 1 69.15 ? N1 H4B 802 B 1 HETATM 2 C C2 H4B . . . I 3 14.427 2.681 49.551 1 66.25 ? C2 H4B 802 B 1 HETATM 3 N N2 H4B . . . I 3 13.395 1.909 49.977 1 56.76 ? N2 H4B 802 B 1 HETATM 4 N N3 H4B . . . I 3 15.522 2.831 50.337 1 61.55 ? N3 H4B 802 B 1 HETATM 5 C C4 H4B . . . I 3 16.56 3.604 49.928 1 61.08 ? C4 H4B 802 B 1 HETATM 6 O O4 H4B . . . I 3 17.549 3.73 50.682 1 64 ? O4 H4B 802 B 1 HETATM 7 C C4A H4B . . . I 3 16.509 4.262 48.695 1 54.08 ? C4A H4B 802 B 1 HETATM 8 C C8A H4B . . . I 3 15.378 4.082 47.901 1 51.57 ? C8A H4B 802 B 1 HETATM 9 N N5 H4B . . . I 3 17.521 5.062 48.255 1 39.05 ? N5 H4B 802 B 1 HETATM 10 N N8 H4B . . . I 3 15.279 4.69 46.701 1 45.71 ? N8 H4B 802 B 1 HETATM 11 C C6 H4B . . . I 3 17.143 6.088 47.29 1 45.14 ? C6 H4B 802 B 1 HETATM 12 C C7 H4B . . . I 3 16.406 5.425 46.133 1 44.6 ? C7 H4B 802 B 1 HETATM 13 C C9 H4B . . . I 3 18.313 6.956 46.819 1 45.38 ? C9 H4B 802 B 1 HETATM 14 O O9 H4B . . . I 3 19.55 6.259 47.004 1 49.07 ? O9 H4B 802 B 1 HETATM 15 C C10 H4B . . . I 3 18.167 7.364 45.35 1 46.14 ? C10 H4B 802 B 1 HETATM 16 C C11 H4B . . . I 3 19.3 8.285 44.905 1 48.32 ? C11 H4B 802 B 1 HETATM 17 O O10 H4B . . . I 3 16.925 8.049 45.13 1 45.18 ? O10 H4B 802 B 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #