data_5UOA # _model_server_result.job_id 7I-W9LlbOh_cz9esqh7dYQ _model_server_result.datetime_utc '2024-11-24 00:38:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uoa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":505}' # _entry.id 5UOA # _exptl.entry_id 5UOA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.24 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5UOA _cell.length_a 57.476 _cell.length_b 109.662 _cell.length_c 154.051 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UOA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 54 A CYS 94 1_555 H ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc2 A SG CYS 59 A CYS 99 1_555 H ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc3 A SG CYS 144 A CYS 184 1_555 C FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc4 A OD2 ASP 329 A ASP 369 1_555 L ZN ZN . A ZN 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc5 A NE2 HIS 421 A HIS 461 1_555 K ZN ZN . A ZN 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc6 F O3 BTB . A BTB 504 1_555 J GD GD . A GD 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? metalc ? metalc7 F O4 BTB . A BTB 504 1_555 J GD GD . A GD 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.807 ? metalc ? metalc8 F N BTB . A BTB 504 1_555 J GD GD . A GD 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc9 F O6 BTB . A BTB 504 1_555 J GD GD . A GD 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.723 ? metalc ? metalc10 F O8 BTB . A BTB 504 1_555 J GD GD . A GD 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc11 H ZN ZN . A ZN 506 1_555 B SG CYS 54 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc12 H ZN ZN . A ZN 506 1_555 B SG CYS 59 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc13 J GD GD . A GD 508 1_555 Y O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc14 J GD GD . A GD 508 1_555 Y O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc15 J GD GD . A GD 508 1_555 Z O HOH . B HOH 630 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.786 ? metalc ? metalc16 K ZN ZN . A ZN 509 1_555 Y O HOH . A HOH 626 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc17 K ZN ZN . A ZN 509 1_555 Y O HOH . A HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc18 K ZN ZN . A ZN 509 1_555 B OD2 ASP 329 B ASP 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc19 L ZN ZN . A ZN 510 1_555 Y O HOH . A HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc20 L ZN ZN . A ZN 510 1_555 Y O HOH . A HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc21 L ZN ZN . A ZN 510 1_555 B NE2 HIS 421 B HIS 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc22 B SG CYS 144 B CYS 184 1_555 N FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc23 B O THR 279 B THR 319 1_555 W GD GD . B GD 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc24 B OE1 GLU 281 B GLU 321 1_555 W GD GD . B GD 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? metalc ? metalc25 Q O3 BTB . B BTB 504 1_555 W GD GD . B GD 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? metalc ? metalc26 Q O4 BTB . B BTB 504 1_555 W GD GD . B GD 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc27 Q N BTB . B BTB 504 1_555 W GD GD . B GD 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc28 Q O6 BTB . B BTB 504 1_555 W GD GD . B GD 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc29 Q O8 BTB . B BTB 504 1_555 W GD GD . B GD 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.815 ? metalc ? metalc30 W GD GD . B GD 510 1_555 Z O HOH . B HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc31 W GD GD . B GD 510 1_555 Z O HOH . B HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? # _chem_comp.formula 'C8 H19 N O5' _chem_comp.formula_weight 209.24 _chem_comp.id BTB _chem_comp.mon_nstd_flag . _chem_comp.name 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'BIS-TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BTB sing 117 n n C1 C2 BTB sing 118 n n C1 H11 BTB sing 119 n n C1 H12 BTB sing 120 n n O1 HO1 BTB sing 121 n n C2 C3 BTB sing 122 n n C2 C4 BTB sing 123 n n C2 N BTB sing 124 n n C3 O3 BTB sing 125 n n C3 H31 BTB sing 126 n n C3 H32 BTB sing 127 n n O3 HO3 BTB sing 128 n n C4 O4 BTB sing 129 n n C4 H41 BTB sing 130 n n C4 H42 BTB sing 131 n n O4 HO4 BTB sing 132 n n N C5 BTB sing 133 n n N C7 BTB sing 134 n n C5 C6 BTB sing 135 n n C5 H51 BTB sing 136 n n C5 H52 BTB sing 137 n n C6 O6 BTB sing 138 n n C6 H61 BTB sing 139 n n C6 H62 BTB sing 140 n n O6 HO6 BTB sing 141 n n C7 C8 BTB sing 142 n n C7 H71 BTB sing 143 n n C7 H72 BTB sing 144 n n C8 O8 BTB sing 145 n n C8 H81 BTB sing 146 n n C8 H82 BTB sing 147 n n O8 HO8 BTB sing 148 n n # _atom_sites.entry_id 5UOA _atom_sites.fract_transf_matrix[1][1] 0.017399 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009119 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006491 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 501 500 HEM HEM . D 3 8EY A 1 502 800 8EY M68 . E 3 8EY A 1 503 801 8EY M68 . F 4 BTB A 1 504 870 BTB TRB . G 4 BTB A 1 505 871 BTB TRB . H 5 ZN A 1 506 900 ZN ZN . I 6 GOL A 1 507 880 GOL GOL . J 7 GD A 1 508 1 GD GD . K 5 ZN A 1 509 1 ZN ZN . L 5 ZN A 1 510 2 ZN ZN . M 8 CL A 1 511 1 CL CL . N 2 HEM B 1 501 500 HEM HEM . O 3 8EY B 1 502 800 8EY M68 . P 3 8EY B 1 503 801 8EY M68 . Q 4 BTB B 1 504 870 BTB TRB . R 4 BTB B 1 505 871 BTB TRB . S 4 BTB B 1 506 872 BTB TRB . T 4 BTB B 1 507 873 BTB TRB . U 4 BTB B 1 508 874 BTB TRB . V 4 BTB B 1 509 875 BTB TRB . W 7 GD B 1 510 2 GD GD . X 8 CL B 1 511 1 CL CL . Y 9 HOH A 1 601 18 HOH HOH . Y 9 HOH A 2 602 43 HOH HOH . Y 9 HOH A 3 603 42 HOH HOH . Y 9 HOH A 4 604 36 HOH HOH . Y 9 HOH A 5 605 15 HOH HOH . Y 9 HOH A 6 606 9 HOH HOH . Y 9 HOH A 7 607 53 HOH HOH . Y 9 HOH A 8 608 52 HOH HOH . Y 9 HOH A 9 609 12 HOH HOH . Y 9 HOH A 10 610 37 HOH HOH . Y 9 HOH A 11 611 16 HOH HOH . Y 9 HOH A 12 612 11 HOH HOH . Y 9 HOH A 13 613 29 HOH HOH . Y 9 HOH A 14 614 30 HOH HOH . Y 9 HOH A 15 615 25 HOH HOH . Y 9 HOH A 16 616 54 HOH HOH . Y 9 HOH A 17 617 55 HOH HOH . Y 9 HOH A 18 618 4 HOH HOH . Y 9 HOH A 19 619 33 HOH HOH . Y 9 HOH A 20 620 23 HOH HOH . Y 9 HOH A 21 621 39 HOH HOH . Y 9 HOH A 22 622 50 HOH HOH . Y 9 HOH A 23 623 41 HOH HOH . Y 9 HOH A 24 624 2 HOH HOH . Y 9 HOH A 25 625 44 HOH HOH . Y 9 HOH A 26 626 3 HOH HOH . Y 9 HOH A 27 627 0 HOH HOH . Y 9 HOH A 28 628 1 HOH HOH . Z 9 HOH B 1 601 31 HOH HOH . Z 9 HOH B 2 602 56 HOH HOH . Z 9 HOH B 3 603 5 HOH HOH . Z 9 HOH B 4 604 19 HOH HOH . Z 9 HOH B 5 605 20 HOH HOH . Z 9 HOH B 6 606 26 HOH HOH . Z 9 HOH B 7 607 28 HOH HOH . Z 9 HOH B 8 608 27 HOH HOH . Z 9 HOH B 9 609 14 HOH HOH . Z 9 HOH B 10 610 10 HOH HOH . Z 9 HOH B 11 611 34 HOH HOH . Z 9 HOH B 12 612 7 HOH HOH . Z 9 HOH B 13 613 48 HOH HOH . Z 9 HOH B 14 614 49 HOH HOH . Z 9 HOH B 15 615 6 HOH HOH . Z 9 HOH B 16 616 13 HOH HOH . Z 9 HOH B 17 617 35 HOH HOH . Z 9 HOH B 18 618 40 HOH HOH . Z 9 HOH B 19 619 22 HOH HOH . Z 9 HOH B 20 620 45 HOH HOH . Z 9 HOH B 21 621 8 HOH HOH . Z 9 HOH B 22 622 38 HOH HOH . Z 9 HOH B 23 623 57 HOH HOH . Z 9 HOH B 24 624 21 HOH HOH . Z 9 HOH B 25 625 24 HOH HOH . Z 9 HOH B 26 626 17 HOH HOH . Z 9 HOH B 27 627 32 HOH HOH . Z 9 HOH B 28 628 46 HOH HOH . Z 9 HOH B 29 629 47 HOH HOH . Z 9 HOH B 30 630 51 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BTB . . . G 4 -7.01 19.841 0.904 1 100.39 ? C1 BTB 505 A 1 HETATM 2 O O1 BTB . . . G 4 -8.089 19.296 1.678 1 97.9 ? O1 BTB 505 A 1 HETATM 3 C C2 BTB . . . G 4 -7.468 21.179 0.334 1 104.13 ? C2 BTB 505 A 1 HETATM 4 C C3 BTB . . . G 4 -7.647 22.141 1.515 1 107.38 ? C3 BTB 505 A 1 HETATM 5 O O3 BTB . . . G 4 -6.497 22.101 2.374 1 102.74 ? O3 BTB 505 A 1 HETATM 6 C C4 BTB . . . G 4 -8.815 20.955 -0.345 1 94.84 ? C4 BTB 505 A 1 HETATM 7 O O4 BTB . . . G 4 -8.583 20.655 -1.726 1 82.38 ? O4 BTB 505 A 1 HETATM 8 N N BTB . . . G 4 -6.537 21.728 -0.699 1 103.89 ? N BTB 505 A 1 HETATM 9 C C5 BTB . . . G 4 -5.312 20.918 -0.839 1 96.65 ? C5 BTB 505 A 1 HETATM 10 C C6 BTB . . . G 4 -5.389 20.212 -2.188 1 95.61 ? C6 BTB 505 A 1 HETATM 11 O O6 BTB . . . G 4 -6.662 20.513 -2.772 1 93.54 ? O6 BTB 505 A 1 HETATM 12 C C7 BTB . . . G 4 -6.202 23.155 -0.474 1 107.1 ? C7 BTB 505 A 1 HETATM 13 C C8 BTB . . . G 4 -5.257 23.706 -1.541 1 114.26 ? C8 BTB 505 A 1 HETATM 14 O O8 BTB . . . G 4 -5.764 23.435 -2.855 1 117.56 ? O8 BTB 505 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 14 #