data_5UP3 # _model_server_result.job_id Gm3LnLtZXKRksFkuFn_l5w _model_server_result.datetime_utc '2024-12-26 09:49:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5up3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1000}' # _entry.id 5UP3 # _exptl.entry_id 5UP3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 319.36 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{6-[4-(propan-2-yl)-4H-1,2,4-triazol-3-yl]pyridin-2-yl}-2,3-dihydro-1H-isoindol-1-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5UP3 _cell.length_a 78.79 _cell.length_b 78.79 _cell.length_c 431.367 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UP3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C18 H17 N5 O' _chem_comp.formula_weight 319.36 _chem_comp.id 8GS _chem_comp.mon_nstd_flag . _chem_comp.name 2-{6-[4-(propan-2-yl)-4H-1,2,4-triazol-3-yl]pyridin-2-yl}-2,3-dihydro-1H-isoindol-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N6 N7 8GS sing 1 n y N6 C5 8GS doub 2 n y N7 C8 8GS doub 3 n y C5 N4 8GS sing 4 n y C8 N4 8GS sing 5 n y C8 C9 8GS sing 6 n n N4 C2 8GS sing 7 n n C3 C2 8GS sing 8 n n C10 C9 8GS doub 9 n y C10 C11 8GS sing 10 n y C9 N14 8GS sing 11 n y C2 C1 8GS sing 12 n n C11 C12 8GS doub 13 n y N14 C13 8GS doub 14 n y C13 C12 8GS sing 15 n y C13 N15 8GS sing 16 n n C16 N15 8GS sing 17 n n C16 C17 8GS sing 18 n n N15 C23 8GS sing 19 n n C17 C18 8GS doub 20 n y C17 C22 8GS sing 21 n y C23 O24 8GS doub 22 n n C23 C22 8GS sing 23 n n C18 C19 8GS sing 24 n y C22 C21 8GS doub 25 n y C19 C20 8GS doub 26 n y C21 C20 8GS sing 27 n y C5 H1 8GS sing 28 n n C10 H2 8GS sing 29 n n C20 H3 8GS sing 30 n n C21 H4 8GS sing 31 n n C1 H5 8GS sing 32 n n C1 H6 8GS sing 33 n n C1 H7 8GS sing 34 n n C2 H8 8GS sing 35 n n C3 H9 8GS sing 36 n n C3 H10 8GS sing 37 n n C3 H11 8GS sing 38 n n C11 H12 8GS sing 39 n n C12 H13 8GS sing 40 n n C16 H14 8GS sing 41 n n C16 H15 8GS sing 42 n n C18 H16 8GS sing 43 n n C19 H17 8GS sing 44 n n # _atom_sites.entry_id 5UP3 _atom_sites.fract_transf_matrix[1][1] 0.012692 _atom_sites.fract_transf_matrix[1][2] 0.007328 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014655 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002318 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 8GS A 1 1000 1000 8GS LIG . D 2 8GS B 1 1000 1000 8GS LIG . E 3 HOH A 1 1101 1011 HOH HOH . E 3 HOH A 2 1102 1010 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 8GS . . . C 2 3.292 9.393 20.895 1 54.48 ? C5 8GS 1000 A 1 HETATM 2 C C8 8GS . . . C 2 2.981 7.554 21.999 1 45.06 ? C8 8GS 1000 A 1 HETATM 3 C C10 8GS . . . C 2 3.205 5.23 22.964 1 39.93 ? C10 8GS 1000 A 1 HETATM 4 C C13 8GS . . . C 2 1.387 5.921 24.862 1 55.03 ? C13 8GS 1000 A 1 HETATM 5 C C17 8GS . . . C 2 -0.93 7.978 26.874 1 41.9 ? C17 8GS 1000 A 1 HETATM 6 C C20 8GS . . . C 2 -2.369 7.783 29.2 1 48.69 ? C20 8GS 1000 A 1 HETATM 7 C C21 8GS . . . C 2 -1.619 6.692 28.799 1 45.01 ? C21 8GS 1000 A 1 HETATM 8 C C22 8GS . . . C 2 -0.895 6.778 27.606 1 48.68 ? C22 8GS 1000 A 1 HETATM 9 C C1 8GS . . . C 2 3.171 10.905 23.423 1 38.68 ? C1 8GS 1000 A 1 HETATM 10 C C2 8GS . . . C 2 2.215 9.744 23.125 1 43.01 ? C2 8GS 1000 A 1 HETATM 11 C C3 8GS . . . C 2 0.866 10.308 22.729 1 45.24 ? C3 8GS 1000 A 1 HETATM 12 N N4 8GS . . . C 2 2.787 8.919 22.052 1 45.61 ? N4 8GS 1000 A 1 HETATM 13 N N6 8GS . . . C 2 3.745 8.388 20.2 1 52.25 ? N6 8GS 1000 A 1 HETATM 14 N N7 8GS . . . C 2 3.567 7.308 20.854 1 56.25 ? N7 8GS 1000 A 1 HETATM 15 C C9 8GS . . . C 2 2.63 6.511 22.998 1 44.86 ? C9 8GS 1000 A 1 HETATM 16 C C11 8GS . . . C 2 2.846 4.287 23.92 1 44.08 ? C11 8GS 1000 A 1 HETATM 17 C C12 8GS . . . C 2 1.924 4.626 24.901 1 40.67 ? C12 8GS 1000 A 1 HETATM 18 N N14 8GS . . . C 2 1.757 6.801 23.941 1 46.67 ? N14 8GS 1000 A 1 HETATM 19 N N15 8GS . . . C 2 0.482 6.412 25.801 1 53.96 ? N15 8GS 1000 A 1 HETATM 20 C C16 8GS . . . C 2 -0.043 7.772 25.693 1 44.36 ? C16 8GS 1000 A 1 HETATM 21 C C18 8GS . . . C 2 -1.682 9.057 27.275 1 37.23 ? C18 8GS 1000 A 1 HETATM 22 C C19 8GS . . . C 2 -2.406 8.956 28.449 1 43.81 ? C19 8GS 1000 A 1 HETATM 23 C C23 8GS . . . C 2 -0.008 5.815 26.915 1 55.29 ? C23 8GS 1000 A 1 HETATM 24 O O24 8GS . . . C 2 0.218 4.663 27.29 1 53.68 ? O24 8GS 1000 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #