data_5URI # _model_server_result.job_id 8Xzv3QSOb65Q0xMUMBac2A _model_server_result.datetime_utc '2024-10-14 16:20:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uri # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":703}' # _entry.id 5URI # _exptl.entry_id 5URI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 347.221 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-2'-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5URI _cell.length_a 101.276 _cell.length_b 115.808 _cell.length_c 117.988 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5URI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 I N N # _chem_comp.formula 'C10 H14 N5 O7 P' _chem_comp.formula_weight 347.221 _chem_comp.id 2AM _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-2'-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P 2AM doub 1 n n P O2P 2AM sing 2 n n P O3P 2AM sing 3 n n P O2' 2AM sing 4 n n O2P HOP2 2AM sing 5 n n O3P HOP3 2AM sing 6 n n C5' O5' 2AM sing 7 n n C5' C4' 2AM sing 8 n n C5' "H5'1" 2AM sing 9 n n C5' "H5'2" 2AM sing 10 n n O5' HO5' 2AM sing 11 n n C4' O4' 2AM sing 12 n n C4' C3' 2AM sing 13 n n C4' H4' 2AM sing 14 n n O4' C1' 2AM sing 15 n n C3' O3' 2AM sing 16 n n C3' C2' 2AM sing 17 n n C3' H3' 2AM sing 18 n n O3' HO3' 2AM sing 19 n n C2' O2' 2AM sing 20 n n C2' C1' 2AM sing 21 n n C2' H2' 2AM sing 22 n n C1' N9 2AM sing 23 n n C1' H1' 2AM sing 24 n n N9 C8 2AM sing 25 n y N9 C4 2AM sing 26 n y C8 N7 2AM doub 27 n y C8 H8 2AM sing 28 n n N7 C5 2AM sing 29 n y C5 C6 2AM sing 30 n y C5 C4 2AM doub 31 n y C6 N6 2AM sing 32 n n C6 N1 2AM doub 33 n y N6 HN61 2AM sing 34 n n N6 HN62 2AM sing 35 n n N1 C2 2AM sing 36 n y C2 N3 2AM doub 37 n y C2 H2 2AM sing 38 n n N3 C4 2AM sing 39 n y # _atom_sites.entry_id 5URI _atom_sites.fract_transf_matrix[1][1] 0.009874 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008475 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 701 751 FMN FMN . D 3 FAD A 1 702 752 FAD FAD . E 4 2AM A 1 703 753 2AM 2AM . F 5 PO4 A 1 704 755 PO4 PO4 . G 2 FMN B 1 701 751 FMN FMN . H 3 FAD B 1 702 752 FAD FAD . I 4 2AM B 1 703 753 2AM 2AM . J 5 PO4 B 1 704 755 PO4 PO4 . K 6 HOH A 1 801 192 HOH HOH . K 6 HOH A 2 802 167 HOH HOH . K 6 HOH A 3 803 63 HOH HOH . K 6 HOH A 4 804 196 HOH HOH . K 6 HOH A 5 805 201 HOH HOH . K 6 HOH A 6 806 183 HOH HOH . K 6 HOH A 7 807 154 HOH HOH . K 6 HOH A 8 808 51 HOH HOH . K 6 HOH A 9 809 208 HOH HOH . K 6 HOH A 10 810 211 HOH HOH . K 6 HOH A 11 811 3 HOH HOH . K 6 HOH A 12 812 199 HOH HOH . K 6 HOH A 13 813 178 HOH HOH . K 6 HOH A 14 814 119 HOH HOH . K 6 HOH A 15 815 159 HOH HOH . K 6 HOH A 16 816 203 HOH HOH . K 6 HOH A 17 817 81 HOH HOH . K 6 HOH A 18 818 14 HOH HOH . K 6 HOH A 19 819 130 HOH HOH . K 6 HOH A 20 820 219 HOH HOH . K 6 HOH A 21 821 226 HOH HOH . K 6 HOH A 22 822 74 HOH HOH . K 6 HOH A 23 823 7 HOH HOH . K 6 HOH A 24 824 57 HOH HOH . K 6 HOH A 25 825 216 HOH HOH . K 6 HOH A 26 826 72 HOH HOH . K 6 HOH A 27 827 97 HOH HOH . K 6 HOH A 28 828 47 HOH HOH . K 6 HOH A 29 829 186 HOH HOH . K 6 HOH A 30 830 197 HOH HOH . K 6 HOH A 31 831 59 HOH HOH . K 6 HOH A 32 832 217 HOH HOH . K 6 HOH A 33 833 77 HOH HOH . K 6 HOH A 34 834 6 HOH HOH . K 6 HOH A 35 835 125 HOH HOH . K 6 HOH A 36 836 133 HOH HOH . K 6 HOH A 37 837 56 HOH HOH . K 6 HOH A 38 838 128 HOH HOH . K 6 HOH A 39 839 198 HOH HOH . K 6 HOH A 40 840 110 HOH HOH . K 6 HOH A 41 841 36 HOH HOH . K 6 HOH A 42 842 41 HOH HOH . K 6 HOH A 43 843 212 HOH HOH . K 6 HOH A 44 844 160 HOH HOH . K 6 HOH A 45 845 202 HOH HOH . K 6 HOH A 46 846 228 HOH HOH . K 6 HOH A 47 847 161 HOH HOH . K 6 HOH A 48 848 165 HOH HOH . K 6 HOH A 49 849 60 HOH HOH . K 6 HOH A 50 850 89 HOH HOH . K 6 HOH A 51 851 213 HOH HOH . K 6 HOH A 52 852 168 HOH HOH . K 6 HOH A 53 853 147 HOH HOH . K 6 HOH A 54 854 200 HOH HOH . K 6 HOH A 55 855 50 HOH HOH . K 6 HOH A 56 856 220 HOH HOH . K 6 HOH A 57 857 5 HOH HOH . K 6 HOH A 58 858 67 HOH HOH . K 6 HOH A 59 859 141 HOH HOH . K 6 HOH A 60 860 129 HOH HOH . K 6 HOH A 61 861 8 HOH HOH . K 6 HOH A 62 862 58 HOH HOH . K 6 HOH A 63 863 222 HOH HOH . K 6 HOH A 64 864 2 HOH HOH . K 6 HOH A 65 865 121 HOH HOH . K 6 HOH A 66 866 206 HOH HOH . K 6 HOH A 67 867 39 HOH HOH . K 6 HOH A 68 868 120 HOH HOH . K 6 HOH A 69 869 92 HOH HOH . K 6 HOH A 70 870 107 HOH HOH . K 6 HOH A 71 871 31 HOH HOH . K 6 HOH A 72 872 85 HOH HOH . K 6 HOH A 73 873 32 HOH HOH . K 6 HOH A 74 874 27 HOH HOH . K 6 HOH A 75 875 144 HOH HOH . K 6 HOH A 76 876 90 HOH HOH . K 6 HOH A 77 877 174 HOH HOH . K 6 HOH A 78 878 52 HOH HOH . K 6 HOH A 79 879 116 HOH HOH . K 6 HOH A 80 880 176 HOH HOH . K 6 HOH A 81 881 143 HOH HOH . K 6 HOH A 82 882 111 HOH HOH . K 6 HOH A 83 883 54 HOH HOH . K 6 HOH A 84 884 79 HOH HOH . K 6 HOH A 85 885 84 HOH HOH . K 6 HOH A 86 886 225 HOH HOH . K 6 HOH A 87 887 19 HOH HOH . K 6 HOH A 88 888 25 HOH HOH . K 6 HOH A 89 889 221 HOH HOH . K 6 HOH A 90 890 22 HOH HOH . K 6 HOH A 91 891 118 HOH HOH . K 6 HOH A 92 892 40 HOH HOH . K 6 HOH A 93 893 164 HOH HOH . K 6 HOH A 94 894 149 HOH HOH . K 6 HOH A 95 895 82 HOH HOH . K 6 HOH A 96 896 101 HOH HOH . K 6 HOH A 97 897 105 HOH HOH . K 6 HOH A 98 898 24 HOH HOH . K 6 HOH A 99 899 135 HOH HOH . K 6 HOH A 100 900 175 HOH HOH . K 6 HOH A 101 901 62 HOH HOH . K 6 HOH A 102 902 104 HOH HOH . K 6 HOH A 103 903 45 HOH HOH . K 6 HOH A 104 904 172 HOH HOH . K 6 HOH A 105 905 20 HOH HOH . K 6 HOH A 106 906 75 HOH HOH . K 6 HOH A 107 907 53 HOH HOH . K 6 HOH A 108 908 109 HOH HOH . K 6 HOH A 109 909 124 HOH HOH . K 6 HOH A 110 910 157 HOH HOH . K 6 HOH A 111 911 187 HOH HOH . K 6 HOH A 112 912 204 HOH HOH . K 6 HOH A 113 913 29 HOH HOH . K 6 HOH A 114 914 158 HOH HOH . K 6 HOH A 115 915 38 HOH HOH . K 6 HOH A 116 916 103 HOH HOH . K 6 HOH A 117 917 136 HOH HOH . K 6 HOH A 118 918 37 HOH HOH . K 6 HOH A 119 919 94 HOH HOH . K 6 HOH A 120 920 156 HOH HOH . K 6 HOH A 121 921 113 HOH HOH . K 6 HOH A 122 922 117 HOH HOH . K 6 HOH A 123 923 91 HOH HOH . K 6 HOH A 124 924 155 HOH HOH . K 6 HOH A 125 925 166 HOH HOH . K 6 HOH A 126 926 12 HOH HOH . K 6 HOH A 127 927 169 HOH HOH . K 6 HOH A 128 928 43 HOH HOH . K 6 HOH A 129 929 34 HOH HOH . K 6 HOH A 130 930 87 HOH HOH . K 6 HOH A 131 931 71 HOH HOH . K 6 HOH A 132 932 162 HOH HOH . K 6 HOH A 133 933 189 HOH HOH . K 6 HOH A 134 934 66 HOH HOH . K 6 HOH A 135 935 188 HOH HOH . L 6 HOH B 1 801 114 HOH HOH . L 6 HOH B 2 802 83 HOH HOH . L 6 HOH B 3 803 123 HOH HOH . L 6 HOH B 4 804 126 HOH HOH . L 6 HOH B 5 805 182 HOH HOH . L 6 HOH B 6 806 49 HOH HOH . L 6 HOH B 7 807 21 HOH HOH . L 6 HOH B 8 808 184 HOH HOH . L 6 HOH B 9 809 10 HOH HOH . L 6 HOH B 10 810 26 HOH HOH . L 6 HOH B 11 811 18 HOH HOH . L 6 HOH B 12 812 139 HOH HOH . L 6 HOH B 13 813 98 HOH HOH . L 6 HOH B 14 814 207 HOH HOH . L 6 HOH B 15 815 99 HOH HOH . L 6 HOH B 16 816 88 HOH HOH . L 6 HOH B 17 817 78 HOH HOH . L 6 HOH B 18 818 150 HOH HOH . L 6 HOH B 19 819 209 HOH HOH . L 6 HOH B 20 820 61 HOH HOH . L 6 HOH B 21 821 15 HOH HOH . L 6 HOH B 22 822 30 HOH HOH . L 6 HOH B 23 823 137 HOH HOH . L 6 HOH B 24 824 224 HOH HOH . L 6 HOH B 25 825 93 HOH HOH . L 6 HOH B 26 826 11 HOH HOH . L 6 HOH B 27 827 151 HOH HOH . L 6 HOH B 28 828 46 HOH HOH . L 6 HOH B 29 829 100 HOH HOH . L 6 HOH B 30 830 170 HOH HOH . L 6 HOH B 31 831 42 HOH HOH . L 6 HOH B 32 832 205 HOH HOH . L 6 HOH B 33 833 86 HOH HOH . L 6 HOH B 34 834 127 HOH HOH . L 6 HOH B 35 835 70 HOH HOH . L 6 HOH B 36 836 80 HOH HOH . L 6 HOH B 37 837 16 HOH HOH . L 6 HOH B 38 838 33 HOH HOH . L 6 HOH B 39 839 190 HOH HOH . L 6 HOH B 40 840 132 HOH HOH . L 6 HOH B 41 841 134 HOH HOH . L 6 HOH B 42 842 112 HOH HOH . L 6 HOH B 43 843 64 HOH HOH . L 6 HOH B 44 844 210 HOH HOH . L 6 HOH B 45 845 177 HOH HOH . L 6 HOH B 46 846 69 HOH HOH . L 6 HOH B 47 847 68 HOH HOH . L 6 HOH B 48 848 4 HOH HOH . L 6 HOH B 49 849 35 HOH HOH . L 6 HOH B 50 850 215 HOH HOH . L 6 HOH B 51 851 146 HOH HOH . L 6 HOH B 52 852 115 HOH HOH . L 6 HOH B 53 853 48 HOH HOH . L 6 HOH B 54 854 1 HOH HOH . L 6 HOH B 55 855 180 HOH HOH . L 6 HOH B 56 856 223 HOH HOH . L 6 HOH B 57 857 95 HOH HOH . L 6 HOH B 58 858 23 HOH HOH . L 6 HOH B 59 859 13 HOH HOH . L 6 HOH B 60 860 96 HOH HOH . L 6 HOH B 61 861 17 HOH HOH . L 6 HOH B 62 862 214 HOH HOH . L 6 HOH B 63 863 28 HOH HOH . L 6 HOH B 64 864 122 HOH HOH . L 6 HOH B 65 865 73 HOH HOH . L 6 HOH B 66 866 218 HOH HOH . L 6 HOH B 67 867 131 HOH HOH . L 6 HOH B 68 868 65 HOH HOH . L 6 HOH B 69 869 148 HOH HOH . L 6 HOH B 70 870 185 HOH HOH . L 6 HOH B 71 871 152 HOH HOH . L 6 HOH B 72 872 44 HOH HOH . L 6 HOH B 73 873 227 HOH HOH . L 6 HOH B 74 874 179 HOH HOH . L 6 HOH B 75 875 140 HOH HOH . L 6 HOH B 76 876 108 HOH HOH . L 6 HOH B 77 877 142 HOH HOH . L 6 HOH B 78 878 106 HOH HOH . L 6 HOH B 79 879 193 HOH HOH . L 6 HOH B 80 880 195 HOH HOH . L 6 HOH B 81 881 194 HOH HOH . L 6 HOH B 82 882 163 HOH HOH . L 6 HOH B 83 883 76 HOH HOH . L 6 HOH B 84 884 55 HOH HOH . L 6 HOH B 85 885 229 HOH HOH . L 6 HOH B 86 886 173 HOH HOH . L 6 HOH B 87 887 153 HOH HOH . L 6 HOH B 88 888 171 HOH HOH . L 6 HOH B 89 889 9 HOH HOH . L 6 HOH B 90 890 181 HOH HOH . L 6 HOH B 91 891 145 HOH HOH . L 6 HOH B 92 892 102 HOH HOH . L 6 HOH B 93 893 138 HOH HOH . L 6 HOH B 94 894 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 2AM . . . I 4 -10.674 -6.57 35.872 1 34.11 ? P 2AM 703 B 1 HETATM 2 O O1P 2AM . . . I 4 -10.731 -6.106 34.468 1 32.46 ? O1P 2AM 703 B 1 HETATM 3 O O2P 2AM . . . I 4 -11.498 -7.769 36.146 1 32.88 ? O2P 2AM 703 B 1 HETATM 4 O O3P 2AM . . . I 4 -10.809 -5.484 36.869 1 32.05 ? O3P 2AM 703 B 1 HETATM 5 C C5' 2AM . . . I 4 -7.997 -11.482 37.426 1 32.61 ? C5' 2AM 703 B 1 HETATM 6 O O5' 2AM . . . I 4 -9.175 -11.784 36.674 1 29.51 ? O5' 2AM 703 B 1 HETATM 7 C C4' 2AM . . . I 4 -7.453 -10.106 37.036 1 33.77 ? C4' 2AM 703 B 1 HETATM 8 O O4' 2AM . . . I 4 -7.205 -10.039 35.621 1 35.2 ? O4' 2AM 703 B 1 HETATM 9 C C3' 2AM . . . I 4 -8.482 -9.023 37.334 1 34.13 ? C3' 2AM 703 B 1 HETATM 10 O O3' 2AM . . . I 4 -7.883 -7.986 38.124 1 33.78 ? O3' 2AM 703 B 1 HETATM 11 C C2' 2AM . . . I 4 -8.806 -8.463 35.961 1 34.02 ? C2' 2AM 703 B 1 HETATM 12 O O2' 2AM . . . I 4 -9.155 -7.073 36.059 1 33.23 ? O2' 2AM 703 B 1 HETATM 13 C C1' 2AM . . . I 4 -7.461 -8.666 35.29 1 35.85 ? C1' 2AM 703 B 1 HETATM 14 N N9 2AM . . . I 4 -7.485 -8.42 33.83 1 38.99 ? N9 2AM 703 B 1 HETATM 15 C C8 2AM . . . I 4 -8.567 -8.338 33.061 1 38.84 ? C8 2AM 703 B 1 HETATM 16 N N7 2AM . . . I 4 -8.159 -8.164 31.808 1 40.85 ? N7 2AM 703 B 1 HETATM 17 C C5 2AM . . . I 4 -6.829 -8.15 31.797 1 40.58 ? C5 2AM 703 B 1 HETATM 18 C C6 2AM . . . I 4 -5.954 -8.055 30.798 1 41.42 ? C6 2AM 703 B 1 HETATM 19 N N6 2AM . . . I 4 -6.456 -7.857 29.582 1 41.34 ? N6 2AM 703 B 1 HETATM 20 N N1 2AM . . . I 4 -4.631 -8.105 31.003 1 41.15 ? N1 2AM 703 B 1 HETATM 21 C C2 2AM . . . I 4 -4.159 -8.244 32.312 1 39.34 ? C2 2AM 703 B 1 HETATM 22 N N3 2AM . . . I 4 -5.104 -8.338 33.34 1 38.7 ? N3 2AM 703 B 1 HETATM 23 C C4 2AM . . . I 4 -6.412 -8.3 33.052 1 38.8 ? C4 2AM 703 B 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #