data_5URV # _model_server_result.job_id V1--Q6a_L64Ols9VErcG9w _model_server_result.datetime_utc '2024-11-06 01:51:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5urv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":205}' # _entry.id 5URV # _exptl.entry_id 5URV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5URV _cell.length_a 97.56 _cell.length_b 104.902 _cell.length_c 41.351 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5URV _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 20 A CYS 19 1_555 A SG CYS 81 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf2 A SG CYS 28 A CYS 27 1_555 A SG CYS 74 A CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf3 A SG CYS 65 A CYS 64 1_555 A SG CYS 102 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf4 A SG CYS 91 A CYS 90 1_555 A SG CYS 131 A CYS 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 A SG CYS 95 A CYS 94 1_555 A SG CYS 119 A CYS 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf6 B SG CYS 20 B CYS 19 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf7 B SG CYS 28 B CYS 27 1_555 B SG CYS 74 B CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf8 B SG CYS 65 B CYS 64 1_555 B SG CYS 102 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf9 B SG CYS 91 B CYS 90 1_555 B SG CYS 131 B CYS 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf10 B SG CYS 95 B CYS 94 1_555 B SG CYS 119 B CYS 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? covale ? covale1 A ND2 ASN 34 A ASN 33 1_555 D C1 NAG . A NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.529 ? covale ? covale2 B ND2 ASN 34 B ASN 33 1_555 H C1 NAG . B NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.57 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 431 n n S O2 SO4 doub 432 n n S O3 SO4 sing 433 n n S O4 SO4 sing 434 n n # _atom_sites.entry_id 5URV _atom_sites.fract_transf_matrix[1][1] 0.01025 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009533 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024183 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NER A 1 201 1 NER LIG . D 3 NAG A 1 202 2 NAG NAG . E 4 SO4 A 1 203 7 SO4 SO4 . F 4 SO4 A 1 204 8 SO4 SO4 . G 4 SO4 A 1 205 9 SO4 SO4 . H 3 NAG B 1 201 3 NAG NAG . I 5 1PG B 1 202 4 1PG 15P . J 5 1PG B 1 203 5 1PG 15P . K 5 1PG B 1 204 6 1PG 15P . L 4 SO4 B 1 205 10 SO4 SO4 . M 4 SO4 B 1 206 11 SO4 SO4 . N 4 SO4 B 1 207 12 SO4 SO4 . O 4 SO4 B 1 208 13 SO4 SO4 . P 4 SO4 B 1 209 14 SO4 SO4 . Q 6 HOH A 1 301 22 HOH HOH . Q 6 HOH A 2 302 132 HOH HOH . Q 6 HOH A 3 303 156 HOH HOH . Q 6 HOH A 4 304 64 HOH HOH . Q 6 HOH A 5 305 101 HOH HOH . Q 6 HOH A 6 306 63 HOH HOH . Q 6 HOH A 7 307 246 HOH HOH . Q 6 HOH A 8 308 236 HOH HOH . Q 6 HOH A 9 309 41 HOH HOH . Q 6 HOH A 10 310 69 HOH HOH . Q 6 HOH A 11 311 102 HOH HOH . Q 6 HOH A 12 312 147 HOH HOH . Q 6 HOH A 13 313 29 HOH HOH . Q 6 HOH A 14 314 59 HOH HOH . Q 6 HOH A 15 315 21 HOH HOH . Q 6 HOH A 16 316 223 HOH HOH . Q 6 HOH A 17 317 24 HOH HOH . Q 6 HOH A 18 318 34 HOH HOH . Q 6 HOH A 19 319 103 HOH HOH . Q 6 HOH A 20 320 258 HOH HOH . Q 6 HOH A 21 321 238 HOH HOH . Q 6 HOH A 22 322 46 HOH HOH . Q 6 HOH A 23 323 79 HOH HOH . Q 6 HOH A 24 324 18 HOH HOH . Q 6 HOH A 25 325 243 HOH HOH . Q 6 HOH A 26 326 23 HOH HOH . Q 6 HOH A 27 327 37 HOH HOH . Q 6 HOH A 28 328 110 HOH HOH . Q 6 HOH A 29 329 116 HOH HOH . Q 6 HOH A 30 330 200 HOH HOH . Q 6 HOH A 31 331 50 HOH HOH . Q 6 HOH A 32 332 25 HOH HOH . Q 6 HOH A 33 333 81 HOH HOH . Q 6 HOH A 34 334 161 HOH HOH . Q 6 HOH A 35 335 129 HOH HOH . Q 6 HOH A 36 336 131 HOH HOH . Q 6 HOH A 37 337 30 HOH HOH . Q 6 HOH A 38 338 137 HOH HOH . Q 6 HOH A 39 339 13 HOH HOH . Q 6 HOH A 40 340 7 HOH HOH . Q 6 HOH A 41 341 123 HOH HOH . Q 6 HOH A 42 342 43 HOH HOH . Q 6 HOH A 43 343 82 HOH HOH . Q 6 HOH A 44 344 74 HOH HOH . Q 6 HOH A 45 345 39 HOH HOH . Q 6 HOH A 46 346 121 HOH HOH . Q 6 HOH A 47 347 14 HOH HOH . Q 6 HOH A 48 348 70 HOH HOH . Q 6 HOH A 49 349 152 HOH HOH . Q 6 HOH A 50 350 148 HOH HOH . Q 6 HOH A 51 351 38 HOH HOH . Q 6 HOH A 52 352 73 HOH HOH . Q 6 HOH A 53 353 190 HOH HOH . Q 6 HOH A 54 354 106 HOH HOH . Q 6 HOH A 55 355 133 HOH HOH . Q 6 HOH A 56 356 185 HOH HOH . Q 6 HOH A 57 357 67 HOH HOH . Q 6 HOH A 58 358 194 HOH HOH . Q 6 HOH A 59 359 227 HOH HOH . Q 6 HOH A 60 360 233 HOH HOH . Q 6 HOH A 61 361 16 HOH HOH . Q 6 HOH A 62 362 261 HOH HOH . Q 6 HOH A 63 363 120 HOH HOH . Q 6 HOH A 64 364 91 HOH HOH . Q 6 HOH A 65 365 95 HOH HOH . Q 6 HOH A 66 366 9 HOH HOH . Q 6 HOH A 67 367 99 HOH HOH . Q 6 HOH A 68 368 149 HOH HOH . Q 6 HOH A 69 369 175 HOH HOH . Q 6 HOH A 70 370 188 HOH HOH . Q 6 HOH A 71 371 232 HOH HOH . Q 6 HOH A 72 372 222 HOH HOH . Q 6 HOH A 73 373 113 HOH HOH . Q 6 HOH A 74 374 239 HOH HOH . Q 6 HOH A 75 375 88 HOH HOH . Q 6 HOH A 76 376 221 HOH HOH . Q 6 HOH A 77 377 240 HOH HOH . Q 6 HOH A 78 378 80 HOH HOH . Q 6 HOH A 79 379 33 HOH HOH . Q 6 HOH A 80 380 264 HOH HOH . Q 6 HOH A 81 381 171 HOH HOH . Q 6 HOH A 82 382 90 HOH HOH . Q 6 HOH A 83 383 203 HOH HOH . Q 6 HOH A 84 384 169 HOH HOH . Q 6 HOH A 85 385 249 HOH HOH . Q 6 HOH A 86 386 226 HOH HOH . Q 6 HOH A 87 387 65 HOH HOH . Q 6 HOH A 88 388 235 HOH HOH . Q 6 HOH A 89 389 142 HOH HOH . Q 6 HOH A 90 390 230 HOH HOH . Q 6 HOH A 91 391 76 HOH HOH . Q 6 HOH A 92 392 266 HOH HOH . Q 6 HOH A 93 393 77 HOH HOH . Q 6 HOH A 94 394 184 HOH HOH . Q 6 HOH A 95 395 211 HOH HOH . R 6 HOH B 1 301 209 HOH HOH . R 6 HOH B 2 302 128 HOH HOH . R 6 HOH B 3 303 215 HOH HOH . R 6 HOH B 4 304 127 HOH HOH . R 6 HOH B 5 305 122 HOH HOH . R 6 HOH B 6 306 52 HOH HOH . R 6 HOH B 7 307 183 HOH HOH . R 6 HOH B 8 308 1 HOH HOH . R 6 HOH B 9 309 53 HOH HOH . R 6 HOH B 10 310 107 HOH HOH . R 6 HOH B 11 311 27 HOH HOH . R 6 HOH B 12 312 217 HOH HOH . R 6 HOH B 13 313 182 HOH HOH . R 6 HOH B 14 314 71 HOH HOH . R 6 HOH B 15 315 255 HOH HOH . R 6 HOH B 16 316 118 HOH HOH . R 6 HOH B 17 317 225 HOH HOH . R 6 HOH B 18 318 4 HOH HOH . R 6 HOH B 19 319 54 HOH HOH . R 6 HOH B 20 320 2 HOH HOH . R 6 HOH B 21 321 31 HOH HOH . R 6 HOH B 22 322 143 HOH HOH . R 6 HOH B 23 323 141 HOH HOH . R 6 HOH B 24 324 19 HOH HOH . R 6 HOH B 25 325 186 HOH HOH . R 6 HOH B 26 326 56 HOH HOH . R 6 HOH B 27 327 60 HOH HOH . R 6 HOH B 28 328 89 HOH HOH . R 6 HOH B 29 329 12 HOH HOH . R 6 HOH B 30 330 15 HOH HOH . R 6 HOH B 31 331 36 HOH HOH . R 6 HOH B 32 332 96 HOH HOH . R 6 HOH B 33 333 104 HOH HOH . R 6 HOH B 34 334 68 HOH HOH . R 6 HOH B 35 335 178 HOH HOH . R 6 HOH B 36 336 3 HOH HOH . R 6 HOH B 37 337 49 HOH HOH . R 6 HOH B 38 338 265 HOH HOH . R 6 HOH B 39 339 199 HOH HOH . R 6 HOH B 40 340 8 HOH HOH . R 6 HOH B 41 341 28 HOH HOH . R 6 HOH B 42 342 165 HOH HOH . R 6 HOH B 43 343 192 HOH HOH . R 6 HOH B 44 344 6 HOH HOH . R 6 HOH B 45 345 10 HOH HOH . R 6 HOH B 46 346 5 HOH HOH . R 6 HOH B 47 347 172 HOH HOH . R 6 HOH B 48 348 242 HOH HOH . R 6 HOH B 49 349 130 HOH HOH . R 6 HOH B 50 350 259 HOH HOH . R 6 HOH B 51 351 84 HOH HOH . R 6 HOH B 52 352 193 HOH HOH . R 6 HOH B 53 353 195 HOH HOH . R 6 HOH B 54 354 48 HOH HOH . R 6 HOH B 55 355 92 HOH HOH . R 6 HOH B 56 356 51 HOH HOH . R 6 HOH B 57 357 126 HOH HOH . R 6 HOH B 58 358 17 HOH HOH . R 6 HOH B 59 359 108 HOH HOH . R 6 HOH B 60 360 150 HOH HOH . R 6 HOH B 61 361 98 HOH HOH . R 6 HOH B 62 362 93 HOH HOH . R 6 HOH B 63 363 85 HOH HOH . R 6 HOH B 64 364 160 HOH HOH . R 6 HOH B 65 365 20 HOH HOH . R 6 HOH B 66 366 254 HOH HOH . R 6 HOH B 67 367 179 HOH HOH . R 6 HOH B 68 368 44 HOH HOH . R 6 HOH B 69 369 40 HOH HOH . R 6 HOH B 70 370 32 HOH HOH . R 6 HOH B 71 371 140 HOH HOH . R 6 HOH B 72 372 154 HOH HOH . R 6 HOH B 73 373 83 HOH HOH . R 6 HOH B 74 374 174 HOH HOH . R 6 HOH B 75 375 145 HOH HOH . R 6 HOH B 76 376 35 HOH HOH . R 6 HOH B 77 377 124 HOH HOH . R 6 HOH B 78 378 109 HOH HOH . R 6 HOH B 79 379 72 HOH HOH . R 6 HOH B 80 380 207 HOH HOH . R 6 HOH B 81 381 257 HOH HOH . R 6 HOH B 82 382 253 HOH HOH . R 6 HOH B 83 383 112 HOH HOH . R 6 HOH B 84 384 136 HOH HOH . R 6 HOH B 85 385 97 HOH HOH . R 6 HOH B 86 386 42 HOH HOH . R 6 HOH B 87 387 231 HOH HOH . R 6 HOH B 88 388 75 HOH HOH . R 6 HOH B 89 389 216 HOH HOH . R 6 HOH B 90 390 196 HOH HOH . R 6 HOH B 91 391 191 HOH HOH . R 6 HOH B 92 392 26 HOH HOH . R 6 HOH B 93 393 114 HOH HOH . R 6 HOH B 94 394 260 HOH HOH . R 6 HOH B 95 395 57 HOH HOH . R 6 HOH B 96 396 153 HOH HOH . R 6 HOH B 97 397 144 HOH HOH . R 6 HOH B 98 398 47 HOH HOH . R 6 HOH B 99 399 45 HOH HOH . R 6 HOH B 100 400 115 HOH HOH . R 6 HOH B 101 401 94 HOH HOH . R 6 HOH B 102 402 237 HOH HOH . R 6 HOH B 103 403 168 HOH HOH . R 6 HOH B 104 404 87 HOH HOH . R 6 HOH B 105 405 228 HOH HOH . R 6 HOH B 106 406 138 HOH HOH . R 6 HOH B 107 407 202 HOH HOH . R 6 HOH B 108 408 86 HOH HOH . R 6 HOH B 109 409 212 HOH HOH . R 6 HOH B 110 410 58 HOH HOH . R 6 HOH B 111 411 151 HOH HOH . R 6 HOH B 112 412 55 HOH HOH . R 6 HOH B 113 413 181 HOH HOH . R 6 HOH B 114 414 62 HOH HOH . R 6 HOH B 115 415 119 HOH HOH . R 6 HOH B 116 416 187 HOH HOH . R 6 HOH B 117 417 180 HOH HOH . R 6 HOH B 118 418 263 HOH HOH . R 6 HOH B 119 419 157 HOH HOH . R 6 HOH B 120 420 198 HOH HOH . R 6 HOH B 121 421 244 HOH HOH . R 6 HOH B 122 422 204 HOH HOH . R 6 HOH B 123 423 170 HOH HOH . R 6 HOH B 124 424 262 HOH HOH . R 6 HOH B 125 425 197 HOH HOH . R 6 HOH B 126 426 201 HOH HOH . R 6 HOH B 127 427 210 HOH HOH . R 6 HOH B 128 428 176 HOH HOH . R 6 HOH B 129 429 66 HOH HOH . R 6 HOH B 130 430 205 HOH HOH . R 6 HOH B 131 431 159 HOH HOH . R 6 HOH B 132 432 224 HOH HOH . R 6 HOH B 133 433 220 HOH HOH . R 6 HOH B 134 434 100 HOH HOH . R 6 HOH B 135 435 162 HOH HOH . R 6 HOH B 136 436 155 HOH HOH . R 6 HOH B 137 437 105 HOH HOH . R 6 HOH B 138 438 78 HOH HOH . R 6 HOH B 139 439 117 HOH HOH . R 6 HOH B 140 440 166 HOH HOH . R 6 HOH B 141 441 158 HOH HOH . R 6 HOH B 142 442 234 HOH HOH . R 6 HOH B 143 443 173 HOH HOH . R 6 HOH B 144 444 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 4 30.335 35.766 3.31 1 68.41 ? S SO4 205 A 1 HETATM 2 O O1 SO4 . . . G 4 31.704 35.524 2.859 1 70.81 ? O1 SO4 205 A 1 HETATM 3 O O2 SO4 . . . G 4 29.539 36.31 2.207 1 66.29 ? O2 SO4 205 A 1 HETATM 4 O O3 SO4 . . . G 4 29.753 34.506 3.793 1 60.53 ? O3 SO4 205 A 1 HETATM 5 O O4 SO4 . . . G 4 30.383 36.749 4.394 1 73.34 ? O4 SO4 205 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 5 #