data_5UT7 # _model_server_result.job_id 3YmvREO4Z0h9kKw9AwuVig _model_server_result.datetime_utc '2024-11-13 04:19:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ut7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 5UT7 # _exptl.entry_id 5UT7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.005 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRITE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5UT7 _cell.length_a 90.32 _cell.length_b 90.32 _cell.length_c 45.25 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UT7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 I N N ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 93 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc2 B FE HEM . A HEM 201 1_555 C N NO2 . A NO2 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? metalc ? metalc3 B FE HEM . A HEM 201 1_555 C O1 NO2 . A NO2 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? # _chem_comp.formula 'N O2 -1' _chem_comp.formula_weight 46.005 _chem_comp.id NO2 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRITE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO2 doub 319 n n N O2 NO2 sing 320 n n # _atom_sites.entry_id 5UT7 _atom_sites.fract_transf_matrix[1][1] 0.011072 _atom_sites.fract_transf_matrix[1][2] 0.006392 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012785 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022099 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 155 HEM HEM . C 3 NO2 A 1 202 1 NO2 NO2 . D 3 NO2 A 1 203 1 NO2 NO2 . E 3 NO2 A 1 204 1 NO2 NO2 . F 3 NO2 A 1 205 1 NO2 NO2 . G 4 SO4 A 1 206 6920 SO4 SO4 . H 4 SO4 A 1 207 6920 SO4 SO4 . I 3 NO2 A 1 208 5657 NO2 NO2 . J 3 NO2 A 1 209 5657 NO2 NO2 . K 3 NO2 A 1 210 5657 NO2 NO2 . L 5 GOL A 1 211 3968 GOL GOL . M 4 SO4 A 1 212 6920 SO4 SO4 . N 6 HOH A 1 301 235 HOH HOH . N 6 HOH A 2 302 119 HOH HOH . N 6 HOH A 3 303 200 HOH HOH . N 6 HOH A 4 304 212 HOH HOH . N 6 HOH A 5 305 214 HOH HOH . N 6 HOH A 6 306 176 HOH HOH . N 6 HOH A 7 307 209 HOH HOH . N 6 HOH A 8 308 63 HOH HOH . N 6 HOH A 9 309 147 HOH HOH . N 6 HOH A 10 310 130 HOH HOH . N 6 HOH A 11 311 79 HOH HOH . N 6 HOH A 12 312 122 HOH HOH . N 6 HOH A 13 313 150 HOH HOH . N 6 HOH A 14 314 234 HOH HOH . N 6 HOH A 15 315 183 HOH HOH . N 6 HOH A 16 316 151 HOH HOH . N 6 HOH A 17 317 54 HOH HOH . N 6 HOH A 18 318 24 HOH HOH . N 6 HOH A 19 319 166 HOH HOH . N 6 HOH A 20 320 169 HOH HOH . N 6 HOH A 21 321 77 HOH HOH . N 6 HOH A 22 322 181 HOH HOH . N 6 HOH A 23 323 154 HOH HOH . N 6 HOH A 24 324 81 HOH HOH . N 6 HOH A 25 325 47 HOH HOH . N 6 HOH A 26 326 153 HOH HOH . N 6 HOH A 27 327 65 HOH HOH . N 6 HOH A 28 328 83 HOH HOH . N 6 HOH A 29 329 89 HOH HOH . N 6 HOH A 30 330 91 HOH HOH . N 6 HOH A 31 331 177 HOH HOH . N 6 HOH A 32 332 145 HOH HOH . N 6 HOH A 33 333 190 HOH HOH . N 6 HOH A 34 334 149 HOH HOH . N 6 HOH A 35 335 39 HOH HOH . N 6 HOH A 36 336 38 HOH HOH . N 6 HOH A 37 337 28 HOH HOH . N 6 HOH A 38 338 26 HOH HOH . N 6 HOH A 39 339 90 HOH HOH . N 6 HOH A 40 340 114 HOH HOH . N 6 HOH A 41 341 15 HOH HOH . N 6 HOH A 42 342 104 HOH HOH . N 6 HOH A 43 343 187 HOH HOH . N 6 HOH A 44 344 30 HOH HOH . N 6 HOH A 45 345 118 HOH HOH . N 6 HOH A 46 346 143 HOH HOH . N 6 HOH A 47 347 180 HOH HOH . N 6 HOH A 48 348 13 HOH HOH . N 6 HOH A 49 349 66 HOH HOH . N 6 HOH A 50 350 35 HOH HOH . N 6 HOH A 51 351 188 HOH HOH . N 6 HOH A 52 352 146 HOH HOH . N 6 HOH A 53 353 44 HOH HOH . N 6 HOH A 54 354 41 HOH HOH . N 6 HOH A 55 355 61 HOH HOH . N 6 HOH A 56 356 9 HOH HOH . N 6 HOH A 57 357 103 HOH HOH . N 6 HOH A 58 358 85 HOH HOH . N 6 HOH A 59 359 158 HOH HOH . N 6 HOH A 60 360 110 HOH HOH . N 6 HOH A 61 361 179 HOH HOH . N 6 HOH A 62 362 55 HOH HOH . N 6 HOH A 63 363 51 HOH HOH . N 6 HOH A 64 364 93 HOH HOH . N 6 HOH A 65 365 165 HOH HOH . N 6 HOH A 66 366 78 HOH HOH . N 6 HOH A 67 367 12 HOH HOH . N 6 HOH A 68 368 182 HOH HOH . N 6 HOH A 69 369 215 HOH HOH . N 6 HOH A 70 370 175 HOH HOH . N 6 HOH A 71 371 4 HOH HOH . N 6 HOH A 72 372 59 HOH HOH . N 6 HOH A 73 373 84 HOH HOH . N 6 HOH A 74 374 45 HOH HOH . N 6 HOH A 75 375 8 HOH HOH . N 6 HOH A 76 376 58 HOH HOH . N 6 HOH A 77 377 49 HOH HOH . N 6 HOH A 78 378 3 HOH HOH . N 6 HOH A 79 379 52 HOH HOH . N 6 HOH A 80 380 43 HOH HOH . N 6 HOH A 81 381 216 HOH HOH . N 6 HOH A 82 382 191 HOH HOH . N 6 HOH A 83 383 56 HOH HOH . N 6 HOH A 84 384 194 HOH HOH . N 6 HOH A 85 385 31 HOH HOH . N 6 HOH A 86 386 237 HOH HOH . N 6 HOH A 87 387 117 HOH HOH . N 6 HOH A 88 388 25 HOH HOH . N 6 HOH A 89 389 42 HOH HOH . N 6 HOH A 90 390 46 HOH HOH . N 6 HOH A 91 391 18 HOH HOH . N 6 HOH A 92 392 168 HOH HOH . N 6 HOH A 93 393 99 HOH HOH . N 6 HOH A 94 394 172 HOH HOH . N 6 HOH A 95 395 60 HOH HOH . N 6 HOH A 96 396 36 HOH HOH . N 6 HOH A 97 397 144 HOH HOH . N 6 HOH A 98 398 80 HOH HOH . N 6 HOH A 99 399 87 HOH HOH . N 6 HOH A 100 400 14 HOH HOH . N 6 HOH A 101 401 226 HOH HOH . N 6 HOH A 102 402 1 HOH HOH . N 6 HOH A 103 403 161 HOH HOH . N 6 HOH A 104 404 157 HOH HOH . N 6 HOH A 105 405 75 HOH HOH . N 6 HOH A 106 406 57 HOH HOH . N 6 HOH A 107 407 53 HOH HOH . N 6 HOH A 108 408 6 HOH HOH . N 6 HOH A 109 409 163 HOH HOH . N 6 HOH A 110 410 17 HOH HOH . N 6 HOH A 111 411 86 HOH HOH . N 6 HOH A 112 412 107 HOH HOH . N 6 HOH A 113 413 92 HOH HOH . N 6 HOH A 114 414 27 HOH HOH . N 6 HOH A 115 415 126 HOH HOH . N 6 HOH A 116 416 2 HOH HOH . N 6 HOH A 117 417 155 HOH HOH . N 6 HOH A 118 418 5 HOH HOH . N 6 HOH A 119 419 113 HOH HOH . N 6 HOH A 120 420 68 HOH HOH . N 6 HOH A 121 421 115 HOH HOH . N 6 HOH A 122 422 16 HOH HOH . N 6 HOH A 123 423 32 HOH HOH . N 6 HOH A 124 424 11 HOH HOH . N 6 HOH A 125 425 164 HOH HOH . N 6 HOH A 126 426 223 HOH HOH . N 6 HOH A 127 427 22 HOH HOH . N 6 HOH A 128 428 178 HOH HOH . N 6 HOH A 129 429 173 HOH HOH . N 6 HOH A 130 430 67 HOH HOH . N 6 HOH A 131 431 218 HOH HOH . N 6 HOH A 132 432 100 HOH HOH . N 6 HOH A 133 433 33 HOH HOH . N 6 HOH A 134 434 137 HOH HOH . N 6 HOH A 135 435 76 HOH HOH . N 6 HOH A 136 436 213 HOH HOH . N 6 HOH A 137 437 72 HOH HOH . N 6 HOH A 138 438 19 HOH HOH . N 6 HOH A 139 439 23 HOH HOH . N 6 HOH A 140 440 102 HOH HOH . N 6 HOH A 141 441 7 HOH HOH . N 6 HOH A 142 442 73 HOH HOH . N 6 HOH A 143 443 186 HOH HOH . N 6 HOH A 144 444 40 HOH HOH . N 6 HOH A 145 445 142 HOH HOH . N 6 HOH A 146 446 227 HOH HOH . N 6 HOH A 147 447 131 HOH HOH . N 6 HOH A 148 448 167 HOH HOH . N 6 HOH A 149 449 29 HOH HOH . N 6 HOH A 150 450 127 HOH HOH . N 6 HOH A 151 451 160 HOH HOH . N 6 HOH A 152 452 174 HOH HOH . N 6 HOH A 153 453 152 HOH HOH . N 6 HOH A 154 454 98 HOH HOH . N 6 HOH A 155 455 156 HOH HOH . N 6 HOH A 156 456 185 HOH HOH . N 6 HOH A 157 457 97 HOH HOH . N 6 HOH A 158 458 228 HOH HOH . N 6 HOH A 159 459 220 HOH HOH . N 6 HOH A 160 460 222 HOH HOH . N 6 HOH A 161 461 230 HOH HOH . N 6 HOH A 162 462 170 HOH HOH . N 6 HOH A 163 463 199 HOH HOH . N 6 HOH A 164 464 69 HOH HOH . N 6 HOH A 165 465 232 HOH HOH . N 6 HOH A 166 466 82 HOH HOH . N 6 HOH A 167 467 202 HOH HOH . N 6 HOH A 168 468 197 HOH HOH . N 6 HOH A 169 469 135 HOH HOH . N 6 HOH A 170 470 205 HOH HOH . N 6 HOH A 171 471 124 HOH HOH . N 6 HOH A 172 472 229 HOH HOH . N 6 HOH A 173 473 116 HOH HOH . N 6 HOH A 174 474 211 HOH HOH . N 6 HOH A 175 475 219 HOH HOH . N 6 HOH A 176 476 204 HOH HOH . N 6 HOH A 177 477 48 HOH HOH . N 6 HOH A 178 478 136 HOH HOH . N 6 HOH A 179 479 189 HOH HOH . N 6 HOH A 180 480 201 HOH HOH . N 6 HOH A 181 481 74 HOH HOH . N 6 HOH A 182 482 111 HOH HOH . N 6 HOH A 183 483 207 HOH HOH . N 6 HOH A 184 484 94 HOH HOH . N 6 HOH A 185 485 138 HOH HOH . N 6 HOH A 186 486 105 HOH HOH . N 6 HOH A 187 487 125 HOH HOH . N 6 HOH A 188 488 109 HOH HOH . N 6 HOH A 189 489 198 HOH HOH . N 6 HOH A 190 490 208 HOH HOH . N 6 HOH A 191 491 106 HOH HOH . N 6 HOH A 192 492 159 HOH HOH . N 6 HOH A 193 493 120 HOH HOH . N 6 HOH A 194 494 210 HOH HOH . N 6 HOH A 195 495 171 HOH HOH . N 6 HOH A 196 496 225 HOH HOH . N 6 HOH A 197 497 21 HOH HOH . N 6 HOH A 198 498 62 HOH HOH . N 6 HOH A 199 499 129 HOH HOH . N 6 HOH A 200 500 71 HOH HOH . N 6 HOH A 201 501 139 HOH HOH . N 6 HOH A 202 502 141 HOH HOH . N 6 HOH A 203 503 64 HOH HOH . N 6 HOH A 204 504 195 HOH HOH . N 6 HOH A 205 505 203 HOH HOH . N 6 HOH A 206 506 206 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO2 . . . D 3 28.345 -22.701 12.496 1 29.17 ? N NO2 203 A 1 HETATM 2 O O1 NO2 . . . D 3 27.532 -21.931 11.999 1 27.52 ? O1 NO2 203 A 1 HETATM 3 O O2 NO2 . . . D 3 28.584 -22.494 13.879 1 34.72 ? O2 NO2 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 3 #