data_5UTA # _model_server_result.job_id K94JrvMBxKQyo4dsEawroA _model_server_result.datetime_utc '2024-11-13 04:54:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uta # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":209}' # _entry.id 5UTA # _exptl.entry_id 5UTA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.005 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRITE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5UTA _cell.length_a 90.388 _cell.length_b 90.388 _cell.length_c 45.244 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UTA _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 M N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 93 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc2 B FE HEM . A HEM 201 1_555 D O2 NO2 . A NO2 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'N O2 -1' _chem_comp.formula_weight 46.005 _chem_comp.id NO2 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRITE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO2 doub 319 n n N O2 NO2 sing 320 n n # _atom_sites.entry_id 5UTA _atom_sites.fract_transf_matrix[1][1] 0.011063 _atom_sites.fract_transf_matrix[1][2] 0.006387 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012775 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022102 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 154 HEM HEM . C 3 SO4 A 1 202 1 SO4 SO4 . D 4 NO2 A 1 203 5657 NO2 NO2 . E 4 NO2 A 1 204 5657 NO2 NO2 . F 4 NO2 A 1 205 5657 NO2 NO2 . G 4 NO2 A 1 206 5657 NO2 NO2 . H 4 NO2 A 1 207 5657 NO2 NO2 . I 4 NO2 A 1 208 5657 NO2 NO2 . J 4 NO2 A 1 209 5657 NO2 NO2 . K 4 NO2 A 1 210 5657 NO2 NO2 . L 3 SO4 A 1 211 6920 SO4 SO4 . M 4 NO2 A 1 212 5657 NO2 NO2 . N 5 GOL A 1 213 3968 GOL GOL . O 5 GOL A 1 214 3968 GOL GOL . P 4 NO2 A 1 215 5657 NO2 NO2 . Q 6 HOH A 1 301 115 HOH HOH . Q 6 HOH A 2 302 59 HOH HOH . Q 6 HOH A 3 303 61 HOH HOH . Q 6 HOH A 4 304 105 HOH HOH . Q 6 HOH A 5 305 75 HOH HOH . Q 6 HOH A 6 306 64 HOH HOH . Q 6 HOH A 7 307 99 HOH HOH . Q 6 HOH A 8 308 68 HOH HOH . Q 6 HOH A 9 309 102 HOH HOH . Q 6 HOH A 10 310 49 HOH HOH . Q 6 HOH A 11 311 109 HOH HOH . Q 6 HOH A 12 312 31 HOH HOH . Q 6 HOH A 13 313 104 HOH HOH . Q 6 HOH A 14 314 38 HOH HOH . Q 6 HOH A 15 315 90 HOH HOH . Q 6 HOH A 16 316 17 HOH HOH . Q 6 HOH A 17 317 25 HOH HOH . Q 6 HOH A 18 318 53 HOH HOH . Q 6 HOH A 19 319 36 HOH HOH . Q 6 HOH A 20 320 93 HOH HOH . Q 6 HOH A 21 321 54 HOH HOH . Q 6 HOH A 22 322 47 HOH HOH . Q 6 HOH A 23 323 46 HOH HOH . Q 6 HOH A 24 324 100 HOH HOH . Q 6 HOH A 25 325 116 HOH HOH . Q 6 HOH A 26 326 4 HOH HOH . Q 6 HOH A 27 327 20 HOH HOH . Q 6 HOH A 28 328 23 HOH HOH . Q 6 HOH A 29 329 94 HOH HOH . Q 6 HOH A 30 330 11 HOH HOH . Q 6 HOH A 31 331 58 HOH HOH . Q 6 HOH A 32 332 19 HOH HOH . Q 6 HOH A 33 333 51 HOH HOH . Q 6 HOH A 34 334 40 HOH HOH . Q 6 HOH A 35 335 107 HOH HOH . Q 6 HOH A 36 336 3 HOH HOH . Q 6 HOH A 37 337 65 HOH HOH . Q 6 HOH A 38 338 2 HOH HOH . Q 6 HOH A 39 339 52 HOH HOH . Q 6 HOH A 40 340 26 HOH HOH . Q 6 HOH A 41 341 50 HOH HOH . Q 6 HOH A 42 342 111 HOH HOH . Q 6 HOH A 43 343 27 HOH HOH . Q 6 HOH A 44 344 13 HOH HOH . Q 6 HOH A 45 345 21 HOH HOH . Q 6 HOH A 46 346 5 HOH HOH . Q 6 HOH A 47 347 14 HOH HOH . Q 6 HOH A 48 348 7 HOH HOH . Q 6 HOH A 49 349 37 HOH HOH . Q 6 HOH A 50 350 66 HOH HOH . Q 6 HOH A 51 351 55 HOH HOH . Q 6 HOH A 52 352 70 HOH HOH . Q 6 HOH A 53 353 63 HOH HOH . Q 6 HOH A 54 354 16 HOH HOH . Q 6 HOH A 55 355 57 HOH HOH . Q 6 HOH A 56 356 113 HOH HOH . Q 6 HOH A 57 357 24 HOH HOH . Q 6 HOH A 58 358 1 HOH HOH . Q 6 HOH A 59 359 9 HOH HOH . Q 6 HOH A 60 360 39 HOH HOH . Q 6 HOH A 61 361 96 HOH HOH . Q 6 HOH A 62 362 74 HOH HOH . Q 6 HOH A 63 363 18 HOH HOH . Q 6 HOH A 64 364 15 HOH HOH . Q 6 HOH A 65 365 89 HOH HOH . Q 6 HOH A 66 366 114 HOH HOH . Q 6 HOH A 67 367 79 HOH HOH . Q 6 HOH A 68 368 71 HOH HOH . Q 6 HOH A 69 369 67 HOH HOH . Q 6 HOH A 70 370 98 HOH HOH . Q 6 HOH A 71 371 73 HOH HOH . Q 6 HOH A 72 372 28 HOH HOH . Q 6 HOH A 73 373 97 HOH HOH . Q 6 HOH A 74 374 60 HOH HOH . Q 6 HOH A 75 375 95 HOH HOH . Q 6 HOH A 76 376 34 HOH HOH . Q 6 HOH A 77 377 22 HOH HOH . Q 6 HOH A 78 378 29 HOH HOH . Q 6 HOH A 79 379 33 HOH HOH . Q 6 HOH A 80 380 86 HOH HOH . Q 6 HOH A 81 381 119 HOH HOH . Q 6 HOH A 82 382 87 HOH HOH . Q 6 HOH A 83 383 43 HOH HOH . Q 6 HOH A 84 384 110 HOH HOH . Q 6 HOH A 85 385 72 HOH HOH . Q 6 HOH A 86 386 82 HOH HOH . Q 6 HOH A 87 387 84 HOH HOH . Q 6 HOH A 88 388 76 HOH HOH . Q 6 HOH A 89 389 101 HOH HOH . Q 6 HOH A 90 390 108 HOH HOH . Q 6 HOH A 91 391 56 HOH HOH . Q 6 HOH A 92 392 106 HOH HOH . Q 6 HOH A 93 393 41 HOH HOH . Q 6 HOH A 94 394 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO2 . . . J 4 77.334 80.035 -9.039 1 36.68 ? N NO2 209 A 1 HETATM 2 O O1 NO2 . . . J 4 76.757 80.633 -9.955 1 42.45 ? O1 NO2 209 A 1 HETATM 3 O O2 NO2 . . . J 4 76.753 78.913 -8.45 1 47.67 ? O2 NO2 209 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #