data_5UTA
#
_model_server_result.job_id            qta66NcXcLYKfvot4a_i7g 
_model_server_result.datetime_utc      '2024-11-13 04:50:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5uta 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":213}' 
#
_entry.id    5UTA 
#
_exptl.entry_id    5UTA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5UTA 
_cell.length_a            90.388 
_cell.length_b            90.388 
_cell.length_c            45.244 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5UTA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        168 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 6' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 N N N 
? 5 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 94 A HIS 93 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? 
metalc ? metalc2 B FE HEM . A HEM 201 1_555 D O2 NO2 . A NO2 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 116 n n 
C1 C2 GOL sing 117 n n 
C1 H11 GOL sing 118 n n 
C1 H12 GOL sing 119 n n 
O1 HO1 GOL sing 120 n n 
C2 O2 GOL sing 121 n n 
C2 C3 GOL sing 122 n n 
C2 H2 GOL sing 123 n n 
O2 HO2 GOL sing 124 n n 
C3 O3 GOL sing 125 n n 
C3 H31 GOL sing 126 n n 
C3 H32 GOL sing 127 n n 
O3 HO3 GOL sing 128 n n 
#
_atom_sites.entry_id                     5UTA 
_atom_sites.fract_transf_matrix[1][1]    0.011063 
_atom_sites.fract_transf_matrix[1][2]    0.006387 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012775 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022102 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 201 154 HEM HEM . 
C 3 SO4 A 1 202 1 SO4 SO4 . 
D 4 NO2 A 1 203 5657 NO2 NO2 . 
E 4 NO2 A 1 204 5657 NO2 NO2 . 
F 4 NO2 A 1 205 5657 NO2 NO2 . 
G 4 NO2 A 1 206 5657 NO2 NO2 . 
H 4 NO2 A 1 207 5657 NO2 NO2 . 
I 4 NO2 A 1 208 5657 NO2 NO2 . 
J 4 NO2 A 1 209 5657 NO2 NO2 . 
K 4 NO2 A 1 210 5657 NO2 NO2 . 
L 3 SO4 A 1 211 6920 SO4 SO4 . 
M 4 NO2 A 1 212 5657 NO2 NO2 . 
N 5 GOL A 1 213 3968 GOL GOL . 
O 5 GOL A 1 214 3968 GOL GOL . 
P 4 NO2 A 1 215 5657 NO2 NO2 . 
Q 6 HOH A 1 301 115 HOH HOH . 
Q 6 HOH A 2 302 59 HOH HOH . 
Q 6 HOH A 3 303 61 HOH HOH . 
Q 6 HOH A 4 304 105 HOH HOH . 
Q 6 HOH A 5 305 75 HOH HOH . 
Q 6 HOH A 6 306 64 HOH HOH . 
Q 6 HOH A 7 307 99 HOH HOH . 
Q 6 HOH A 8 308 68 HOH HOH . 
Q 6 HOH A 9 309 102 HOH HOH . 
Q 6 HOH A 10 310 49 HOH HOH . 
Q 6 HOH A 11 311 109 HOH HOH . 
Q 6 HOH A 12 312 31 HOH HOH . 
Q 6 HOH A 13 313 104 HOH HOH . 
Q 6 HOH A 14 314 38 HOH HOH . 
Q 6 HOH A 15 315 90 HOH HOH . 
Q 6 HOH A 16 316 17 HOH HOH . 
Q 6 HOH A 17 317 25 HOH HOH . 
Q 6 HOH A 18 318 53 HOH HOH . 
Q 6 HOH A 19 319 36 HOH HOH . 
Q 6 HOH A 20 320 93 HOH HOH . 
Q 6 HOH A 21 321 54 HOH HOH . 
Q 6 HOH A 22 322 47 HOH HOH . 
Q 6 HOH A 23 323 46 HOH HOH . 
Q 6 HOH A 24 324 100 HOH HOH . 
Q 6 HOH A 25 325 116 HOH HOH . 
Q 6 HOH A 26 326 4 HOH HOH . 
Q 6 HOH A 27 327 20 HOH HOH . 
Q 6 HOH A 28 328 23 HOH HOH . 
Q 6 HOH A 29 329 94 HOH HOH . 
Q 6 HOH A 30 330 11 HOH HOH . 
Q 6 HOH A 31 331 58 HOH HOH . 
Q 6 HOH A 32 332 19 HOH HOH . 
Q 6 HOH A 33 333 51 HOH HOH . 
Q 6 HOH A 34 334 40 HOH HOH . 
Q 6 HOH A 35 335 107 HOH HOH . 
Q 6 HOH A 36 336 3 HOH HOH . 
Q 6 HOH A 37 337 65 HOH HOH . 
Q 6 HOH A 38 338 2 HOH HOH . 
Q 6 HOH A 39 339 52 HOH HOH . 
Q 6 HOH A 40 340 26 HOH HOH . 
Q 6 HOH A 41 341 50 HOH HOH . 
Q 6 HOH A 42 342 111 HOH HOH . 
Q 6 HOH A 43 343 27 HOH HOH . 
Q 6 HOH A 44 344 13 HOH HOH . 
Q 6 HOH A 45 345 21 HOH HOH . 
Q 6 HOH A 46 346 5 HOH HOH . 
Q 6 HOH A 47 347 14 HOH HOH . 
Q 6 HOH A 48 348 7 HOH HOH . 
Q 6 HOH A 49 349 37 HOH HOH . 
Q 6 HOH A 50 350 66 HOH HOH . 
Q 6 HOH A 51 351 55 HOH HOH . 
Q 6 HOH A 52 352 70 HOH HOH . 
Q 6 HOH A 53 353 63 HOH HOH . 
Q 6 HOH A 54 354 16 HOH HOH . 
Q 6 HOH A 55 355 57 HOH HOH . 
Q 6 HOH A 56 356 113 HOH HOH . 
Q 6 HOH A 57 357 24 HOH HOH . 
Q 6 HOH A 58 358 1 HOH HOH . 
Q 6 HOH A 59 359 9 HOH HOH . 
Q 6 HOH A 60 360 39 HOH HOH . 
Q 6 HOH A 61 361 96 HOH HOH . 
Q 6 HOH A 62 362 74 HOH HOH . 
Q 6 HOH A 63 363 18 HOH HOH . 
Q 6 HOH A 64 364 15 HOH HOH . 
Q 6 HOH A 65 365 89 HOH HOH . 
Q 6 HOH A 66 366 114 HOH HOH . 
Q 6 HOH A 67 367 79 HOH HOH . 
Q 6 HOH A 68 368 71 HOH HOH . 
Q 6 HOH A 69 369 67 HOH HOH . 
Q 6 HOH A 70 370 98 HOH HOH . 
Q 6 HOH A 71 371 73 HOH HOH . 
Q 6 HOH A 72 372 28 HOH HOH . 
Q 6 HOH A 73 373 97 HOH HOH . 
Q 6 HOH A 74 374 60 HOH HOH . 
Q 6 HOH A 75 375 95 HOH HOH . 
Q 6 HOH A 76 376 34 HOH HOH . 
Q 6 HOH A 77 377 22 HOH HOH . 
Q 6 HOH A 78 378 29 HOH HOH . 
Q 6 HOH A 79 379 33 HOH HOH . 
Q 6 HOH A 80 380 86 HOH HOH . 
Q 6 HOH A 81 381 119 HOH HOH . 
Q 6 HOH A 82 382 87 HOH HOH . 
Q 6 HOH A 83 383 43 HOH HOH . 
Q 6 HOH A 84 384 110 HOH HOH . 
Q 6 HOH A 85 385 72 HOH HOH . 
Q 6 HOH A 86 386 82 HOH HOH . 
Q 6 HOH A 87 387 84 HOH HOH . 
Q 6 HOH A 88 388 76 HOH HOH . 
Q 6 HOH A 89 389 101 HOH HOH . 
Q 6 HOH A 90 390 108 HOH HOH . 
Q 6 HOH A 91 391 56 HOH HOH . 
Q 6 HOH A 92 392 106 HOH HOH . 
Q 6 HOH A 93 393 41 HOH HOH . 
Q 6 HOH A 94 394 30 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . N 5 87.449 86.244 22.349 1 50.59 ? C1 GOL 213 A 1 
HETATM 2 O O1 GOL . . . N 5 86.252 86.191 21.495 1 37.91 ? O1 GOL 213 A 1 
HETATM 3 C C2 GOL . . . N 5 88.616 86.951 21.622 1 47.6 ? C2 GOL 213 A 1 
HETATM 4 O O2 GOL . . . N 5 89.161 86.149 20.582 1 37.89 ? O2 GOL 213 A 1 
HETATM 5 C C3 GOL . . . N 5 89.789 87.435 22.469 1 45.9 ? C3 GOL 213 A 1 
HETATM 6 O O3 GOL . . . N 5 90.258 88.691 21.885 1 38.81 ? O3 GOL 213 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#