data_5UU3 # _model_server_result.job_id 7Loaa8l9oZVapH1OGOVz5Q _model_server_result.datetime_utc '2024-11-22 14:08:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uu3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"GA","auth_seq_id":101}' # _entry.id 5UU3 # _exptl.entry_id 5UU3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.111 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENOL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 89.96 _cell.angle_beta 89.93 _cell.angle_gamma 73.41 _cell.entry_id 5UU3 _cell.length_a 40.599 _cell.length_b 47.425 _cell.length_c 78.705 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UU3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dodecameric 12 author_and_software_defined_assembly 1 PISA dodecameric 12 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA 1 1 M,N,O,P,Q,R,S,T,U,V,W,X,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 Y N N ? 3 AA N N ? 3 DA N N ? 3 FA N N ? 3 GA N N ? 3 HA N N ? 3 IA N N ? 3 NA N N ? 3 OA N N ? 3 PA N N ? 3 QA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 E SG CYS 6 E CYS 6 1_555 E SG CYS 11 E CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf8 E SG CYS 7 E CYS 7 1_555 F SG CYS 7 F CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf9 E SG CYS 20 E CYS 20 1_555 F SG CYS 19 F CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf10 G SG CYS 6 G CYS 6 1_555 G SG CYS 11 G CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf11 G SG CYS 7 G CYS 7 1_555 H SG CYS 7 H CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf12 G SG CYS 20 G CYS 20 1_555 H SG CYS 19 H CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf13 I SG CYS 6 I CYS 6 1_555 I SG CYS 11 I CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf14 I SG CYS 7 I CYS 7 1_555 J SG CYS 7 J CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf15 I SG CYS 20 I CYS 20 1_555 J SG CYS 19 J CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf16 K SG CYS 6 K CYS 6 1_555 K SG CYS 11 K CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf17 K SG CYS 7 K CYS 7 1_555 L SG CYS 7 L CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf18 K SG CYS 20 K CYS 20 1_555 L SG CYS 19 L CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf19 M SG CYS 6 M CYS 6 1_555 M SG CYS 11 M CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf20 M SG CYS 7 M CYS 7 1_555 N SG CYS 7 N CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf21 M SG CYS 20 M CYS 20 1_555 N SG CYS 19 N CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf22 O SG CYS 6 O CYS 6 1_555 O SG CYS 11 O CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf23 O SG CYS 7 O CYS 7 1_555 P SG CYS 7 P CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf24 O SG CYS 20 O CYS 20 1_555 P SG CYS 19 P CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf25 Q SG CYS 6 Q CYS 6 1_555 Q SG CYS 11 Q CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf26 Q SG CYS 7 Q CYS 7 1_555 R SG CYS 7 R CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf27 Q SG CYS 20 Q CYS 20 1_555 R SG CYS 19 R CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf28 S SG CYS 6 S CYS 6 1_555 S SG CYS 11 S CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf29 S SG CYS 7 S CYS 7 1_555 T SG CYS 7 T CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf30 S SG CYS 20 S CYS 20 1_555 T SG CYS 19 T CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf31 U SG CYS 6 U CYS 6 1_555 U SG CYS 11 U CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf32 U SG CYS 7 U CYS 7 1_555 V SG CYS 7 V CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf33 U SG CYS 20 U CYS 20 1_555 V SG CYS 19 V CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf34 W SG CYS 6 W CYS 6 1_555 W SG CYS 11 W CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf35 W SG CYS 7 W CYS 7 1_555 X SG CYS 7 X CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf36 W SG CYS 20 W CYS 20 1_555 X SG CYS 19 X CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 B C THR 27 B THR 27 1_555 B N PDF 28 B PDF 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 D C THR 27 D THR 27 1_555 D N PDF 28 D PDF 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 H C THR 27 H THR 27 1_555 H N PDF 28 H PDF 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 J C THR 27 J THR 27 1_555 J N PDF 28 J PDF 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 J C PDF 28 J PDF 28 1_555 J N LYS 29 J LYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 L C THR 27 L THR 27 1_555 L N PDF 28 L PDF 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 N C THR 27 N THR 27 1_555 N N PDF 28 N PDF 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 P C THR 27 P THR 27 1_555 P N PDF 28 P PDF 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 R C THR 27 R THR 27 1_555 R N PDF 28 R PDF 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale10 T C THR 27 T THR 27 1_555 T N PDF 28 T PDF 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 V C THR 27 V THR 27 1_555 V N PDF 28 V PDF 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale12 X C THR 27 X THR 27 1_555 X N PDF 28 X PDF 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 Z ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc2 Z ZN ZN . B ZN 301 1_555 F NE2 HIS 10 F HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc3 Z ZN ZN . B ZN 301 1_555 J NE2 HIS 10 J HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc4 D NE2 HIS 10 D HIS 10 1_555 BA ZN ZN . D ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc5 BA ZN ZN . D ZN 101 1_555 H NE2 HIS 10 H HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc6 BA ZN ZN . D ZN 101 1_555 L NE2 HIS 10 L HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc7 N NE2 HIS 10 N HIS 10 1_555 JA ZN ZN . N ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc8 JA ZN ZN . N ZN 301 1_555 R NE2 HIS 10 R HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc9 JA ZN ZN . N ZN 301 1_555 V NE2 HIS 10 V HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc10 P NE2 HIS 10 P HIS 10 1_555 LA ZN ZN . P ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc11 LA ZN ZN . P ZN 101 1_555 T NE2 HIS 10 T HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc12 LA ZN ZN . P ZN 101 1_555 X NE2 HIS 10 X HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? # _chem_comp.formula 'C6 H6 O' _chem_comp.formula_weight 94.111 _chem_comp.id IPH _chem_comp.mon_nstd_flag . _chem_comp.name PHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPH doub 158 n y C1 C6 IPH sing 159 n y C1 O1 IPH sing 160 n n C2 C3 IPH sing 161 n y C2 H2 IPH sing 162 n n C3 C4 IPH doub 163 n y C3 H3 IPH sing 164 n n C4 C5 IPH sing 165 n y C4 H4 IPH sing 166 n n C5 C6 IPH doub 167 n y C5 H5 IPH sing 168 n n C6 H6 IPH sing 169 n n O1 HO1 IPH sing 170 n n # _atom_sites.entry_id 5UU3 _atom_sites.fract_transf_matrix[1][1] 0.024631 _atom_sites.fract_transf_matrix[1][2] -0.007339 _atom_sites.fract_transf_matrix[1][3] -0.000029 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022002 _atom_sites.fract_transf_matrix[2][3] -0.000008 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012706 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Y 3 IPH A 1 101 1 IPH IPH . Z 4 ZN B 1 301 301 ZN ZN . AA 3 IPH C 1 101 11 IPH IPH . BA 4 ZN D 1 101 302 ZN ZN . CA 5 CL D 1 102 304 CL CL . DA 3 IPH E 1 101 2 IPH IPH . EA 5 CL F 1 101 303 CL CL . FA 3 IPH G 1 101 3 IPH IPH . GA 3 IPH I 1 101 10 IPH IPH . HA 3 IPH K 1 101 9 IPH IPH . IA 3 IPH M 1 101 8 IPH IPH . JA 4 ZN N 1 301 301 ZN ZN . KA 5 CL N 1 302 303 CL CL . LA 4 ZN P 1 101 302 ZN ZN . MA 5 CL P 1 102 304 CL CL . NA 3 IPH Q 1 101 7 IPH IPH . OA 3 IPH S 1 101 6 IPH IPH . PA 3 IPH U 1 101 5 IPH IPH . QA 3 IPH W 1 101 4 IPH IPH . RA 6 HOH T 1 101 1 HOH HOH . SA 6 HOH X 1 101 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPH . . . GA 3 17.98 -21.645 -0.187 1 71.35 ? C1 IPH 101 I 1 HETATM 2 C C2 IPH . . . GA 3 17.891 -20.266 -0.341 1 76.55 ? C2 IPH 101 I 1 HETATM 3 C C3 IPH . . . GA 3 16.703 -19.688 -0.77 1 69.25 ? C3 IPH 101 I 1 HETATM 4 C C4 IPH . . . GA 3 15.603 -20.492 -1.045 1 69.65 ? C4 IPH 101 I 1 HETATM 5 C C5 IPH . . . GA 3 15.688 -21.871 -0.889 1 65.54 ? C5 IPH 101 I 1 HETATM 6 C C6 IPH . . . GA 3 16.878 -22.448 -0.461 1 66.81 ? C6 IPH 101 I 1 HETATM 7 O O1 IPH . . . GA 3 19.147 -22.209 0.236 1 69.57 ? O1 IPH 101 I 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #