data_5UU8 # _model_server_result.job_id DqQZoReCB_Iy5TfxszPIbg _model_server_result.datetime_utc '2024-11-06 10:18:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uu8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 5UU8 # _exptl.entry_id 5UU8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5UU8 _cell.length_a 97.5 _cell.length_b 97.5 _cell.length_c 107.92 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UU8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 57 A ASP 57 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc2 A OD2 ASP 57 A ASP 57 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc3 A OD1 ASP 59 A ASP 59 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc4 A O GLN 61 A GLN 61 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc5 A OD2 ASP 138 A ASP 138 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc6 A NE2 HIS 142 A HIS 142 1_555 F ZN ZN . A ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc7 A NE2 HIS 146 A HIS 146 1_555 F ZN ZN . A ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc8 A OE2 GLU 166 A GLU 166 1_555 F ZN ZN . A ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.937 ? metalc ? metalc9 A OE1 GLU 177 A GLU 177 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc10 A OE2 GLU 177 A GLU 177 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.078 ? metalc ? metalc11 A OE2 GLU 177 A GLU 177 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc12 A O ASN 183 A ASN 183 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc13 A OD1 ASP 185 A ASP 185 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc14 A OD2 ASP 185 A ASP 185 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc15 A O GLU 187 A GLU 187 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc16 A OE1 GLU 190 A GLU 190 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc17 A OE2 GLU 190 A GLU 190 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc18 A OE2 GLU 190 A GLU 190 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc19 A O TYR 193 A TYR 193 1_555 E CA CA . A CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc20 A O THR 194 A THR 194 1_555 E CA CA . A CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc21 A OG1 THR 194 A THR 194 1_555 E CA CA . A CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc22 A O ILE 197 A ILE 197 1_555 E CA CA . A CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc23 A OD1 ASP 200 A ASP 200 1_555 E CA CA . A CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc24 A NE2 HIS 231 A HIS 231 1_555 G ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc25 B CA CA . A CA 401 1_555 M O HOH . A HOH 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc26 C ZN ZN . A ZN 402 1_555 M O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc27 C ZN ZN . A ZN 402 1_555 M O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc28 D CA CA . A CA 403 1_555 M O HOH . A HOH 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc29 D CA CA . A CA 403 1_555 M O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc30 E CA CA . A CA 404 1_555 M O HOH . A HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc31 F ZN ZN . A ZN 405 1_555 M O HOH . A HOH 548 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc32 G ZN ZN . A ZN 406 1_555 M O HOH . A HOH 548 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc33 G ZN ZN . A ZN 406 1_555 M O HOH . A HOH 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc34 G ZN ZN . A ZN 406 1_555 M O HOH . A HOH 637 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5UU8 _atom_sites.fract_transf_matrix[1][1] 0.010256 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010256 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009266 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 401 317 CA CA . C 3 ZN A 1 402 318 ZN ZN . D 2 CA A 1 403 319 CA CA . E 2 CA A 1 404 320 CA CA . F 3 ZN A 1 405 321 ZN ZN . G 3 ZN A 1 406 322 ZN ZN . H 4 XYP A 1 407 352 XYP XYP . I 4 XYP A 1 408 353 XYP XYP . J 4 XYP A 1 409 354 XYP XYP . K 4 XYP A 1 410 356 XYP XYP . L 4 XYP A 1 411 357 XYP XYP . M 5 HOH A 1 501 511 HOH HOH . M 5 HOH A 2 502 536 HOH HOH . M 5 HOH A 3 503 461 HOH HOH . M 5 HOH A 4 504 419 HOH HOH . M 5 HOH A 5 505 507 HOH HOH . M 5 HOH A 6 506 490 HOH HOH . M 5 HOH A 7 507 510 HOH HOH . M 5 HOH A 8 508 540 HOH HOH . M 5 HOH A 9 509 506 HOH HOH . M 5 HOH A 10 510 543 HOH HOH . M 5 HOH A 11 511 438 HOH HOH . M 5 HOH A 12 512 524 HOH HOH . M 5 HOH A 13 513 470 HOH HOH . M 5 HOH A 14 514 457 HOH HOH . M 5 HOH A 15 515 436 HOH HOH . M 5 HOH A 16 516 426 HOH HOH . M 5 HOH A 17 517 482 HOH HOH . M 5 HOH A 18 518 428 HOH HOH . M 5 HOH A 19 519 521 HOH HOH . M 5 HOH A 20 520 453 HOH HOH . M 5 HOH A 21 521 456 HOH HOH . M 5 HOH A 22 522 413 HOH HOH . M 5 HOH A 23 523 542 HOH HOH . M 5 HOH A 24 524 420 HOH HOH . M 5 HOH A 25 525 424 HOH HOH . M 5 HOH A 26 526 471 HOH HOH . M 5 HOH A 27 527 483 HOH HOH . M 5 HOH A 28 528 418 HOH HOH . M 5 HOH A 29 529 462 HOH HOH . M 5 HOH A 30 530 531 HOH HOH . M 5 HOH A 31 531 427 HOH HOH . M 5 HOH A 32 532 532 HOH HOH . M 5 HOH A 33 533 403 HOH HOH . M 5 HOH A 34 534 402 HOH HOH . M 5 HOH A 35 535 408 HOH HOH . M 5 HOH A 36 536 405 HOH HOH . M 5 HOH A 37 537 525 HOH HOH . M 5 HOH A 38 538 544 HOH HOH . M 5 HOH A 39 539 442 HOH HOH . M 5 HOH A 40 540 491 HOH HOH . M 5 HOH A 41 541 415 HOH HOH . M 5 HOH A 42 542 505 HOH HOH . M 5 HOH A 43 543 472 HOH HOH . M 5 HOH A 44 544 401 HOH HOH . M 5 HOH A 45 545 409 HOH HOH . M 5 HOH A 46 546 433 HOH HOH . M 5 HOH A 47 547 425 HOH HOH . M 5 HOH A 48 548 508 HOH HOH . M 5 HOH A 49 549 526 HOH HOH . M 5 HOH A 50 550 548 HOH HOH . M 5 HOH A 51 551 463 HOH HOH . M 5 HOH A 52 552 523 HOH HOH . M 5 HOH A 53 553 407 HOH HOH . M 5 HOH A 54 554 515 HOH HOH . M 5 HOH A 55 555 410 HOH HOH . M 5 HOH A 56 556 554 HOH HOH . M 5 HOH A 57 557 474 HOH HOH . M 5 HOH A 58 558 406 HOH HOH . M 5 HOH A 59 559 488 HOH HOH . M 5 HOH A 60 560 434 HOH HOH . M 5 HOH A 61 561 441 HOH HOH . M 5 HOH A 62 562 454 HOH HOH . M 5 HOH A 63 563 549 HOH HOH . M 5 HOH A 64 564 465 HOH HOH . M 5 HOH A 65 565 517 HOH HOH . M 5 HOH A 66 566 530 HOH HOH . M 5 HOH A 67 567 516 HOH HOH . M 5 HOH A 68 568 499 HOH HOH . M 5 HOH A 69 569 520 HOH HOH . M 5 HOH A 70 570 404 HOH HOH . M 5 HOH A 71 571 494 HOH HOH . M 5 HOH A 72 572 447 HOH HOH . M 5 HOH A 73 573 411 HOH HOH . M 5 HOH A 74 574 512 HOH HOH . M 5 HOH A 75 575 451 HOH HOH . M 5 HOH A 76 576 421 HOH HOH . M 5 HOH A 77 577 503 HOH HOH . M 5 HOH A 78 578 452 HOH HOH . M 5 HOH A 79 579 417 HOH HOH . M 5 HOH A 80 580 467 HOH HOH . M 5 HOH A 81 581 487 HOH HOH . M 5 HOH A 82 582 498 HOH HOH . M 5 HOH A 83 583 480 HOH HOH . M 5 HOH A 84 584 479 HOH HOH . M 5 HOH A 85 585 496 HOH HOH . M 5 HOH A 86 586 432 HOH HOH . M 5 HOH A 87 587 481 HOH HOH . M 5 HOH A 88 588 484 HOH HOH . M 5 HOH A 89 589 416 HOH HOH . M 5 HOH A 90 590 422 HOH HOH . M 5 HOH A 91 591 435 HOH HOH . M 5 HOH A 92 592 448 HOH HOH . M 5 HOH A 93 593 414 HOH HOH . M 5 HOH A 94 594 444 HOH HOH . M 5 HOH A 95 595 519 HOH HOH . M 5 HOH A 96 596 509 HOH HOH . M 5 HOH A 97 597 423 HOH HOH . M 5 HOH A 98 598 501 HOH HOH . M 5 HOH A 99 599 445 HOH HOH . M 5 HOH A 100 600 440 HOH HOH . M 5 HOH A 101 601 429 HOH HOH . M 5 HOH A 102 602 464 HOH HOH . M 5 HOH A 103 603 546 HOH HOH . M 5 HOH A 104 604 541 HOH HOH . M 5 HOH A 105 605 443 HOH HOH . M 5 HOH A 106 606 492 HOH HOH . M 5 HOH A 107 607 450 HOH HOH . M 5 HOH A 108 608 437 HOH HOH . M 5 HOH A 109 609 489 HOH HOH . M 5 HOH A 110 610 539 HOH HOH . M 5 HOH A 111 611 518 HOH HOH . M 5 HOH A 112 612 551 HOH HOH . M 5 HOH A 113 613 469 HOH HOH . M 5 HOH A 114 614 476 HOH HOH . M 5 HOH A 115 615 478 HOH HOH . M 5 HOH A 116 616 545 HOH HOH . M 5 HOH A 117 617 504 HOH HOH . M 5 HOH A 118 618 466 HOH HOH . M 5 HOH A 119 619 528 HOH HOH . M 5 HOH A 120 620 473 HOH HOH . M 5 HOH A 121 621 555 HOH HOH . M 5 HOH A 122 622 550 HOH HOH . M 5 HOH A 123 623 495 HOH HOH . M 5 HOH A 124 624 493 HOH HOH . M 5 HOH A 125 625 535 HOH HOH . M 5 HOH A 126 626 552 HOH HOH . M 5 HOH A 127 627 459 HOH HOH . M 5 HOH A 128 628 485 HOH HOH . M 5 HOH A 129 629 455 HOH HOH . M 5 HOH A 130 630 547 HOH HOH . M 5 HOH A 131 631 458 HOH HOH . M 5 HOH A 132 632 468 HOH HOH . M 5 HOH A 133 633 475 HOH HOH . M 5 HOH A 134 634 534 HOH HOH . M 5 HOH A 135 635 431 HOH HOH . M 5 HOH A 136 636 527 HOH HOH . M 5 HOH A 137 637 446 HOH HOH . M 5 HOH A 138 638 553 HOH HOH . M 5 HOH A 139 639 537 HOH HOH . M 5 HOH A 140 640 500 HOH HOH . M 5 HOH A 141 641 439 HOH HOH . M 5 HOH A 142 642 533 HOH HOH . M 5 HOH A 143 643 522 HOH HOH . M 5 HOH A 144 644 556 HOH HOH . M 5 HOH A 145 645 513 HOH HOH . M 5 HOH A 146 646 477 HOH HOH . M 5 HOH A 147 647 449 HOH HOH . M 5 HOH A 148 648 529 HOH HOH . M 5 HOH A 149 649 460 HOH HOH . M 5 HOH A 150 650 430 HOH HOH . M 5 HOH A 151 651 412 HOH HOH . M 5 HOH A 152 652 486 HOH HOH . M 5 HOH A 153 653 497 HOH HOH . M 5 HOH A 154 654 514 HOH HOH . M 5 HOH A 155 655 538 HOH HOH . M 5 HOH A 156 656 502 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 75.028 _atom_site.Cartn_y 77.495 _atom_site.Cartn_z 26.211 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #