data_5UW0
#
_model_server_result.job_id            XzKH_C1qBmKgpdILTBh8-g 
_model_server_result.datetime_utc      '2025-08-31 23:02:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5uw0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":801}' 
#
_entry.id    5UW0 
#
_exptl.entry_id    5UW0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              568.293 
_entity.id                          4 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            "URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5UW0 
_cell.length_a            193.516 
_cell.length_b            204.705 
_cell.length_c            206.514 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5UW0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C15 H23 F N2 O16 P2' 
_chem_comp.formula_weight    568.293 
_chem_comp.id                U2F 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 U2F sing 387 n n 
C1 C2 U2F sing 388 n n 
C1 O5 U2F sing 389 n n 
C1 H1 U2F sing 390 n n 
O1 PB U2F sing 391 n n 
PB O1B U2F doub 392 n n 
PB O2B U2F sing 393 n n 
PB O3A U2F sing 394 n n 
O3A PA U2F sing 395 n n 
PA O1A U2F doub 396 n n 
PA O2A U2F sing 397 n n 
PA O5' U2F sing 398 n n 
O5' C5' U2F sing 399 n n 
C5' C4' U2F sing 400 n n 
C5' "H5'1" U2F sing 401 n n 
C5' "H5'2" U2F sing 402 n n 
C4' O4' U2F sing 403 n n 
C4' C3' U2F sing 404 n n 
C4' H4' U2F sing 405 n n 
O4' C1' U2F sing 406 n n 
C1' C2' U2F sing 407 n n 
C1' N1 U2F sing 408 n n 
C1' H1' U2F sing 409 n n 
C2' C3' U2F sing 410 n n 
C2' O2' U2F sing 411 n n 
C2' H2' U2F sing 412 n n 
C3' O3' U2F sing 413 n n 
C3' H3' U2F sing 414 n n 
O3' HB U2F sing 415 n n 
O2' HA U2F sing 416 n n 
N1 C6' U2F sing 417 n n 
N1 C9' U2F sing 418 n n 
C6' O6' U2F doub 419 n n 
C6' N3 U2F sing 420 n n 
N3 C7' U2F sing 421 n n 
N3 H3 U2F sing 422 n n 
C7' O7' U2F doub 423 n n 
C7' C8' U2F sing 424 n n 
C8' C9' U2F doub 425 n n 
C8' H8' U2F sing 426 n n 
C9' H9' U2F sing 427 n n 
C2 F1 U2F sing 428 n n 
C2 C3 U2F sing 429 n n 
C2 H2 U2F sing 430 n n 
C3 O3 U2F sing 431 n n 
C3 C4 U2F sing 432 n n 
C3 HC U2F sing 433 n n 
O3 HD U2F sing 434 n n 
C4 O4 U2F sing 435 n n 
C4 C5 U2F sing 436 n n 
C4 H4 U2F sing 437 n n 
O4 HE U2F sing 438 n n 
C5 C6 U2F sing 439 n n 
C5 O5 U2F sing 440 n n 
C5 H5 U2F sing 441 n n 
C6 O6 U2F sing 442 n n 
C6 H6C1 U2F sing 443 n n 
C6 H6C2 U2F sing 444 n n 
O6 H6 U2F sing 445 n n 
HO1 O2A U2F sing 446 n n 
HO2 O2B U2F sing 447 n n 
#
_atom_sites.entry_id                     5UW0 
_atom_sites.fract_transf_matrix[1][1]    0.005168 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004885 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004842 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 UDP A 1 801 807 UDP UDP . 
F 3 G6P A 1 802 808 G6P G6P . 
G 2 UDP B 1 801 804 UDP UDP . 
H 3 G6P B 1 802 805 G6P G6P . 
I 4 U2F C 1 801 803 U2F U2F . 
J 3 G6P C 1 802 806 G6P G6P . 
K 2 UDP D 1 801 801 UDP UDP . 
L 3 G6P D 1 802 802 G6P G6P . 
M 5 HOH C 1 901 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 U2F . . . I 4 73.034 47.325 67.011 1 57.8 ? C1 U2F 801 C 1 
HETATM 2 O O1 U2F . . . I 4 72.927 47.239 68.525 1 59.73 ? O1 U2F 801 C 1 
HETATM 3 P PB U2F . . . I 4 71.741 46.961 69.679 1 53.46 ? PB U2F 801 C 1 
HETATM 4 O O1B U2F . . . I 4 72.257 46.855 71.102 1 58.22 ? O1B U2F 801 C 1 
HETATM 5 O O2B U2F . . . I 4 70.805 45.839 69.345 1 52.49 ? O2B U2F 801 C 1 
HETATM 6 O O3A U2F . . . I 4 71.013 48.402 69.645 1 56.07 ? O3A U2F 801 C 1 
HETATM 7 P PA U2F . . . I 4 69.424 48.668 69.802 1 59 ? PA U2F 801 C 1 
HETATM 8 O O1A U2F . . . I 4 68.795 48.505 68.44 1 61.89 ? O1A U2F 801 C 1 
HETATM 9 O O2A U2F . . . I 4 69.343 50.021 70.487 1 55.2 ? O2A U2F 801 C 1 
HETATM 10 O O5' U2F . . . I 4 68.803 47.481 70.714 1 55.93 ? O5' U2F 801 C 1 
HETATM 11 C C5' U2F . . . I 4 68.845 47.551 72.15 1 59.94 ? C5' U2F 801 C 1 
HETATM 12 C C4' U2F . . . I 4 67.581 46.998 72.798 1 58.61 ? C4' U2F 801 C 1 
HETATM 13 O O4' U2F . . . I 4 67.794 46.84 74.21 1 58.55 ? O4' U2F 801 C 1 
HETATM 14 C C1' U2F . . . I 4 66.551 47.143 74.876 1 58.93 ? C1' U2F 801 C 1 
HETATM 15 C C2' U2F . . . I 4 65.893 48.237 74.022 1 58.64 ? C2' U2F 801 C 1 
HETATM 16 C C3' U2F . . . I 4 66.353 47.899 72.617 1 56.89 ? C3' U2F 801 C 1 
HETATM 17 O O3' U2F . . . I 4 65.326 47.187 71.917 1 53.17 ? O3' U2F 801 C 1 
HETATM 18 O O2' U2F . . . I 4 64.47 48.215 74.199 1 56.03 ? O2' U2F 801 C 1 
HETATM 19 N N1 U2F . . . I 4 66.687 47.526 76.309 1 54.45 ? N1 U2F 801 C 1 
HETATM 20 C C6' U2F . . . I 4 66.138 46.705 77.326 1 52.18 ? C6' U2F 801 C 1 
HETATM 21 O O6' U2F . . . I 4 65.543 45.654 77.046 1 49.68 ? O6' U2F 801 C 1 
HETATM 22 N N3 U2F . . . I 4 66.243 47.036 78.622 1 55.88 ? N3 U2F 801 C 1 
HETATM 23 C C7' U2F . . . I 4 66.875 48.167 78.989 1 60.54 ? C7' U2F 801 C 1 
HETATM 24 O O7' U2F . . . I 4 66.969 48.476 80.204 1 65.32 ? O7' U2F 801 C 1 
HETATM 25 C C8' U2F . . . I 4 67.433 49.004 78.019 1 58.02 ? C8' U2F 801 C 1 
HETATM 26 C C9' U2F . . . I 4 67.323 48.661 76.673 1 55.89 ? C9' U2F 801 C 1 
HETATM 27 C C2 U2F . . . I 4 71.988 48.019 66.093 1 53.64 ? C2 U2F 801 C 1 
HETATM 28 F F1 U2F . . . I 4 71.934 49.367 66.335 1 55.68 ? F1 U2F 801 C 1 
HETATM 29 C C3 U2F . . . I 4 70.619 47.302 66.135 1 53.61 ? C3 U2F 801 C 1 
HETATM 30 O O3 U2F . . . I 4 69.492 47.991 65.552 1 50.62 ? O3 U2F 801 C 1 
HETATM 31 C C4 U2F . . . I 4 70.833 45.943 65.481 1 54.3 ? C4 U2F 801 C 1 
HETATM 32 O O4 U2F . . . I 4 69.577 45.216 65.434 1 53.86 ? O4 U2F 801 C 1 
HETATM 33 C C5 U2F . . . I 4 71.954 45.304 66.319 1 55.77 ? C5 U2F 801 C 1 
HETATM 34 C C6 U2F . . . I 4 72.326 43.908 65.923 1 60.44 ? C6 U2F 801 C 1 
HETATM 35 O O6 U2F . . . I 4 71.086 43.221 65.915 1 69.59 ? O6 U2F 801 C 1 
HETATM 36 O O5 U2F . . . I 4 73.158 46.078 66.307 1 55.87 ? O5 U2F 801 C 1 
#
_model_server_stats.io_time_ms              30 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    78 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           36 
#