data_5UWC # _model_server_result.job_id xQp-2EK7xE-uhcIFg7D9rQ _model_server_result.datetime_utc '2024-12-26 22:25:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uwc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":407}' # _entry.id 5UWC # _exptl.entry_id 5UWC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.243 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5UWC _cell.length_a 106.461 _cell.length_b 106.461 _cell.length_c 96.116 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UWC _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 3 1 FUL NAG C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C NAG 1 A 1 NAG C 401 NAG 3 n C NAG 2 A 2 NAG C 402 NAG 3 n C FUL 3 A 3 FUL C 400 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 33 G CYS 52 1_555 A SG CYS 49 G CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.984 ? disulf ? disulf2 A SG CYS 57 G CYS 76 1_555 A SG CYS 176 G CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.886 ? disulf ? disulf3 A SG CYS 93 G CYS 112 1_555 A SG CYS 103 G CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.873 ? disulf ? disulf4 A SG CYS 132 G CYS 151 1_555 A SG CYS 146 G CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? covale ? covale1 C O4 NAG . A NAG 1 1_555 C C1 NAG . A NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.725 sing covale ? covale2 C O6 NAG . A NAG 1 1_555 C C1 FUL . A FUL 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? # _chem_comp.formula 'C10 H16 N2 O8' _chem_comp.formula_weight 292.243 _chem_comp.id EDT _chem_comp.mon_nstd_flag . _chem_comp.name '{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O20 C5 EDT sing 103 n n O20 H20 EDT sing 104 n n C5 O19 EDT doub 105 n n C5 C4 EDT sing 106 n n C4 N3 EDT sing 107 n n C4 H041 EDT sing 108 n n C4 H042 EDT sing 109 n n N3 C2 EDT sing 110 n n N3 C6 EDT sing 111 n n C2 C1 EDT sing 112 n n C2 H021 EDT sing 113 n n C2 H022 EDT sing 114 n n C1 O18 EDT doub 115 n n C1 O17 EDT sing 116 n n O17 H17 EDT sing 117 n n C6 C7 EDT sing 118 n n C6 H061 EDT sing 119 n n C6 H062 EDT sing 120 n n C7 N8 EDT sing 121 n n C7 H071 EDT sing 122 n n C7 H072 EDT sing 123 n n N8 C9 EDT sing 124 n n N8 C11 EDT sing 125 n n C9 C10 EDT sing 126 n n C9 H091 EDT sing 127 n n C9 H092 EDT sing 128 n n C10 O16 EDT sing 129 n n C10 O15 EDT doub 130 n n O16 H16 EDT sing 131 n n C11 C12 EDT sing 132 n n C11 H111 EDT sing 133 n n C11 H112 EDT sing 134 n n C12 O13 EDT doub 135 n n C12 O14 EDT sing 136 n n O14 H14 EDT sing 137 n n # _atom_sites.entry_id 5UWC _atom_sites.fract_transf_matrix[1][1] 0.009393 _atom_sites.fract_transf_matrix[1][2] 0.005423 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010846 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG G 1 401 500 NAG NAG . E 5 CIT G 1 402 1 CIT CIT . F 6 IMD G 1 406 1 IMD IMD . G 7 EDT G 1 407 1 EDT EDT . H 5 CIT I 1 201 2 CIT CIT . I 8 HOH G 1 501 27 HOH HOH . I 8 HOH G 2 502 17 HOH HOH . I 8 HOH G 3 503 47 HOH HOH . I 8 HOH G 4 504 16 HOH HOH . I 8 HOH G 5 505 4 HOH HOH . I 8 HOH G 6 506 19 HOH HOH . I 8 HOH G 7 507 3 HOH HOH . I 8 HOH G 8 508 52 HOH HOH . I 8 HOH G 9 509 40 HOH HOH . I 8 HOH G 10 510 2 HOH HOH . I 8 HOH G 11 511 41 HOH HOH . I 8 HOH G 12 512 60 HOH HOH . I 8 HOH G 13 513 23 HOH HOH . I 8 HOH G 14 514 56 HOH HOH . I 8 HOH G 15 515 20 HOH HOH . I 8 HOH G 16 516 14 HOH HOH . I 8 HOH G 17 517 37 HOH HOH . I 8 HOH G 18 518 8 HOH HOH . I 8 HOH G 19 519 50 HOH HOH . I 8 HOH G 20 520 5 HOH HOH . I 8 HOH G 21 521 35 HOH HOH . I 8 HOH G 22 522 51 HOH HOH . I 8 HOH G 23 523 36 HOH HOH . I 8 HOH G 24 524 7 HOH HOH . I 8 HOH G 25 525 6 HOH HOH . I 8 HOH G 26 526 10 HOH HOH . I 8 HOH G 27 527 58 HOH HOH . I 8 HOH G 28 528 2 HOH HOH . I 8 HOH G 29 529 11 HOH HOH . I 8 HOH G 30 530 42 HOH HOH . I 8 HOH G 31 531 38 HOH HOH . I 8 HOH G 32 532 24 HOH HOH . I 8 HOH G 33 533 18 HOH HOH . I 8 HOH G 34 534 12 HOH HOH . I 8 HOH G 35 535 45 HOH HOH . I 8 HOH G 36 536 15 HOH HOH . I 8 HOH G 37 537 48 HOH HOH . I 8 HOH G 38 538 53 HOH HOH . I 8 HOH G 39 539 1 HOH HOH . I 8 HOH G 40 540 6 HOH HOH . I 8 HOH G 41 541 49 HOH HOH . I 8 HOH G 42 542 43 HOH HOH . I 8 HOH G 43 543 5 HOH HOH . I 8 HOH G 44 544 7 HOH HOH . I 8 HOH G 45 545 46 HOH HOH . I 8 HOH G 46 546 59 HOH HOH . I 8 HOH G 47 547 55 HOH HOH . I 8 HOH G 48 548 8 HOH HOH . I 8 HOH G 49 549 25 HOH HOH . I 8 HOH G 50 550 4 HOH HOH . I 8 HOH G 51 551 34 HOH HOH . I 8 HOH G 52 552 22 HOH HOH . I 8 HOH G 53 553 39 HOH HOH . I 8 HOH G 54 554 13 HOH HOH . J 8 HOH I 1 301 21 HOH HOH . J 8 HOH I 2 302 1 HOH HOH . J 8 HOH I 3 303 44 HOH HOH . J 8 HOH I 4 304 30 HOH HOH . J 8 HOH I 5 305 57 HOH HOH . J 8 HOH I 6 306 28 HOH HOH . J 8 HOH I 7 307 32 HOH HOH . J 8 HOH I 8 308 31 HOH HOH . J 8 HOH I 9 309 54 HOH HOH . J 8 HOH I 10 310 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O20 EDT . . . G 7 70.234 59.926 -1.474 1 55.85 ? O20 EDT 407 G 1 HETATM 2 C C5 EDT . . . G 7 70.222 59.304 -2.557 1 56.72 ? C5 EDT 407 G 1 HETATM 3 O O19 EDT . . . G 7 71.116 58.475 -2.84 1 55.18 ? O19 EDT 407 G 1 HETATM 4 C C4 EDT . . . G 7 69.062 59.5 -3.506 1 57.77 ? C4 EDT 407 G 1 HETATM 5 N N3 EDT . . . G 7 68.742 60.861 -4.05 1 61.96 ? N3 EDT 407 G 1 HETATM 6 C C2 EDT . . . G 7 68.83 60.837 -5.537 1 63.93 ? C2 EDT 407 G 1 HETATM 7 C C1 EDT . . . G 7 68.393 62.068 -6.313 1 64.32 ? C1 EDT 407 G 1 HETATM 8 O O18 EDT . . . G 7 67.71 61.873 -7.334 1 68.39 ? O18 EDT 407 G 1 HETATM 9 O O17 EDT . . . G 7 68.708 63.226 -5.979 1 63.59 ? O17 EDT 407 G 1 HETATM 10 C C6 EDT . . . G 7 69.177 62.094 -3.315 1 61.69 ? C6 EDT 407 G 1 HETATM 11 C C7 EDT . . . G 7 70.637 62.478 -3.058 1 63.13 ? C7 EDT 407 G 1 HETATM 12 N N8 EDT . . . G 7 71.836 62.257 -3.939 1 65.24 ? N8 EDT 407 G 1 HETATM 13 C C9 EDT . . . G 7 72.827 61.319 -3.361 1 64.54 ? C9 EDT 407 G 1 HETATM 14 C C10 EDT . . . G 7 74.028 62.18 -3.084 1 66.22 ? C10 EDT 407 G 1 HETATM 15 O O16 EDT . . . G 7 75.013 61.667 -2.527 1 67.47 ? O16 EDT 407 G 1 HETATM 16 O O15 EDT . . . G 7 73.993 63.387 -3.42 1 69.6 ? O15 EDT 407 G 1 HETATM 17 C C11 EDT . . . G 7 71.785 62.18 -5.416 1 68.73 ? C11 EDT 407 G 1 HETATM 18 C C12 EDT . . . G 7 73.18 62.22 -6.036 1 70.58 ? C12 EDT 407 G 1 HETATM 19 O O13 EDT . . . G 7 73.695 61.148 -6.469 1 66.51 ? O13 EDT 407 G 1 HETATM 20 O O14 EDT . . . G 7 73.785 63.315 -6.054 1 72.49 ? O14 EDT 407 G 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 20 #