data_5UXI # _model_server_result.job_id rG8k1ncLPonXPWda5L8-ww _model_server_result.datetime_utc '2025-07-16 14:02:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uxi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 5UXI # _exptl.entry_id 5UXI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 201.349 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DECYLAMINE-N,N-DIMETHYL-N-OXIDE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5UXI _cell.length_a 79.655 _cell.length_b 79.655 _cell.length_c 133.055 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UXI _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C12 H27 N O' _chem_comp.formula_weight 201.349 _chem_comp.id DDQ _chem_comp.mon_nstd_flag . _chem_comp.name DECYLAMINE-N,N-DIMETHYL-N-OXIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 DDQ sing 83 n n N1 CM1 DDQ sing 84 n n N1 CM2 DDQ sing 85 n n N1 C1 DDQ sing 86 n n CM1 HM11 DDQ sing 87 n n CM1 HM12 DDQ sing 88 n n CM1 HM13 DDQ sing 89 n n CM2 HM21 DDQ sing 90 n n CM2 HM22 DDQ sing 91 n n CM2 HM23 DDQ sing 92 n n C1 C2 DDQ sing 93 n n C1 H11 DDQ sing 94 n n C1 H12 DDQ sing 95 n n C2 C3 DDQ sing 96 n n C2 H21 DDQ sing 97 n n C2 H22 DDQ sing 98 n n C3 C4 DDQ sing 99 n n C3 H31 DDQ sing 100 n n C3 H32 DDQ sing 101 n n C4 C5 DDQ sing 102 n n C4 H41 DDQ sing 103 n n C4 H42 DDQ sing 104 n n C5 C6 DDQ sing 105 n n C5 H51 DDQ sing 106 n n C5 H52 DDQ sing 107 n n C6 C7 DDQ sing 108 n n C6 H61 DDQ sing 109 n n C6 H62 DDQ sing 110 n n C7 C8 DDQ sing 111 n n C7 H71 DDQ sing 112 n n C7 H72 DDQ sing 113 n n C8 C9 DDQ sing 114 n n C8 H81 DDQ sing 115 n n C8 H82 DDQ sing 116 n n C9 C10 DDQ sing 117 n n C9 H91 DDQ sing 118 n n C9 H92 DDQ sing 119 n n C10 H101 DDQ sing 120 n n C10 H102 DDQ sing 121 n n C10 H103 DDQ sing 122 n n # _atom_sites.entry_id 5UXI _atom_sites.fract_transf_matrix[1][1] 0.012554 _atom_sites.fract_transf_matrix[1][2] 0.007248 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014496 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007516 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DDQ A 1 300 300 DDQ DDQ . C 2 DDQ A 1 301 301 DDQ DDQ . D 2 DDQ A 1 302 302 DDQ DDQ . E 3 HOH A 1 401 28 HOH HOH . E 3 HOH A 2 402 86 HOH HOH . E 3 HOH A 3 403 33 HOH HOH . E 3 HOH A 4 404 77 HOH HOH . E 3 HOH A 5 405 44 HOH HOH . E 3 HOH A 6 406 129 HOH HOH . E 3 HOH A 7 407 134 HOH HOH . E 3 HOH A 8 408 3 HOH HOH . E 3 HOH A 9 409 81 HOH HOH . E 3 HOH A 10 410 49 HOH HOH . E 3 HOH A 11 411 48 HOH HOH . E 3 HOH A 12 412 9 HOH HOH . E 3 HOH A 13 413 136 HOH HOH . E 3 HOH A 14 414 46 HOH HOH . E 3 HOH A 15 415 99 HOH HOH . E 3 HOH A 16 416 71 HOH HOH . E 3 HOH A 17 417 59 HOH HOH . E 3 HOH A 18 418 152 HOH HOH . E 3 HOH A 19 419 68 HOH HOH . E 3 HOH A 20 420 78 HOH HOH . E 3 HOH A 21 421 107 HOH HOH . E 3 HOH A 22 422 106 HOH HOH . E 3 HOH A 23 423 143 HOH HOH . E 3 HOH A 24 424 108 HOH HOH . E 3 HOH A 25 425 95 HOH HOH . E 3 HOH A 26 426 54 HOH HOH . E 3 HOH A 27 427 30 HOH HOH . E 3 HOH A 28 428 85 HOH HOH . E 3 HOH A 29 429 80 HOH HOH . E 3 HOH A 30 430 38 HOH HOH . E 3 HOH A 31 431 22 HOH HOH . E 3 HOH A 32 432 73 HOH HOH . E 3 HOH A 33 433 58 HOH HOH . E 3 HOH A 34 434 14 HOH HOH . E 3 HOH A 35 435 16 HOH HOH . E 3 HOH A 36 436 98 HOH HOH . E 3 HOH A 37 437 23 HOH HOH . E 3 HOH A 38 438 114 HOH HOH . E 3 HOH A 39 439 72 HOH HOH . E 3 HOH A 40 440 51 HOH HOH . E 3 HOH A 41 441 21 HOH HOH . E 3 HOH A 42 442 148 HOH HOH . E 3 HOH A 43 443 20 HOH HOH . E 3 HOH A 44 444 60 HOH HOH . E 3 HOH A 45 445 96 HOH HOH . E 3 HOH A 46 446 4 HOH HOH . E 3 HOH A 47 447 123 HOH HOH . E 3 HOH A 48 448 18 HOH HOH . E 3 HOH A 49 449 65 HOH HOH . E 3 HOH A 50 450 24 HOH HOH . E 3 HOH A 51 451 17 HOH HOH . E 3 HOH A 52 452 93 HOH HOH . E 3 HOH A 53 453 25 HOH HOH . E 3 HOH A 54 454 149 HOH HOH . E 3 HOH A 55 455 151 HOH HOH . E 3 HOH A 56 456 128 HOH HOH . E 3 HOH A 57 457 39 HOH HOH . E 3 HOH A 58 458 83 HOH HOH . E 3 HOH A 59 459 53 HOH HOH . E 3 HOH A 60 460 82 HOH HOH . E 3 HOH A 61 461 15 HOH HOH . E 3 HOH A 62 462 57 HOH HOH . E 3 HOH A 63 463 102 HOH HOH . E 3 HOH A 64 464 121 HOH HOH . E 3 HOH A 65 465 6 HOH HOH . E 3 HOH A 66 466 13 HOH HOH . E 3 HOH A 67 467 55 HOH HOH . E 3 HOH A 68 468 5 HOH HOH . E 3 HOH A 69 469 75 HOH HOH . E 3 HOH A 70 470 67 HOH HOH . E 3 HOH A 71 471 74 HOH HOH . E 3 HOH A 72 472 69 HOH HOH . E 3 HOH A 73 473 19 HOH HOH . E 3 HOH A 74 474 12 HOH HOH . E 3 HOH A 75 475 11 HOH HOH . E 3 HOH A 76 476 8 HOH HOH . E 3 HOH A 77 477 52 HOH HOH . E 3 HOH A 78 478 105 HOH HOH . E 3 HOH A 79 479 45 HOH HOH . E 3 HOH A 80 480 92 HOH HOH . E 3 HOH A 81 481 76 HOH HOH . E 3 HOH A 82 482 111 HOH HOH . E 3 HOH A 83 483 32 HOH HOH . E 3 HOH A 84 484 124 HOH HOH . E 3 HOH A 85 485 119 HOH HOH . E 3 HOH A 86 486 62 HOH HOH . E 3 HOH A 87 487 84 HOH HOH . E 3 HOH A 88 488 66 HOH HOH . E 3 HOH A 89 489 34 HOH HOH . E 3 HOH A 90 490 122 HOH HOH . E 3 HOH A 91 491 64 HOH HOH . E 3 HOH A 92 492 126 HOH HOH . E 3 HOH A 93 493 41 HOH HOH . E 3 HOH A 94 494 79 HOH HOH . E 3 HOH A 95 495 2 HOH HOH . E 3 HOH A 96 496 50 HOH HOH . E 3 HOH A 97 497 10 HOH HOH . E 3 HOH A 98 498 31 HOH HOH . E 3 HOH A 99 499 94 HOH HOH . E 3 HOH A 100 500 36 HOH HOH . E 3 HOH A 101 501 153 HOH HOH . E 3 HOH A 102 502 7 HOH HOH . E 3 HOH A 103 503 56 HOH HOH . E 3 HOH A 104 504 27 HOH HOH . E 3 HOH A 105 505 150 HOH HOH . E 3 HOH A 106 506 43 HOH HOH . E 3 HOH A 107 507 147 HOH HOH . E 3 HOH A 108 508 47 HOH HOH . E 3 HOH A 109 509 70 HOH HOH . E 3 HOH A 110 510 40 HOH HOH . E 3 HOH A 111 511 132 HOH HOH . E 3 HOH A 112 512 35 HOH HOH . E 3 HOH A 113 513 42 HOH HOH . E 3 HOH A 114 514 133 HOH HOH . E 3 HOH A 115 515 130 HOH HOH . E 3 HOH A 116 516 137 HOH HOH . E 3 HOH A 117 517 26 HOH HOH . E 3 HOH A 118 518 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 DDQ . . . D 2 2.559 -17.479 4.571 1 50.94 ? N1 DDQ 302 A 1 HETATM 2 O O1 DDQ . . . D 2 2.492 -16.457 3.849 1 65.99 -1 O1 DDQ 302 A 1 HETATM 3 C CM1 DDQ . . . D 2 1.419 -18.371 4.297 1 55.8 ? CM1 DDQ 302 A 1 HETATM 4 C CM2 DDQ . . . D 2 2.535 -16.918 5.924 1 57.23 ? CM2 DDQ 302 A 1 HETATM 5 C C1 DDQ . . . D 2 3.795 -18.217 4.302 1 46.42 ? C1 DDQ 302 A 1 HETATM 6 C C2 DDQ . . . D 2 3.658 -18.847 2.932 1 48.6 ? C2 DDQ 302 A 1 HETATM 7 C C3 DDQ . . . D 2 4.978 -19.238 2.318 1 49.11 ? C3 DDQ 302 A 1 HETATM 8 C C4 DDQ . . . D 2 4.628 -19.96 1.039 1 46.81 ? C4 DDQ 302 A 1 HETATM 9 C C5 DDQ . . . D 2 5.372 -21.258 0.861 1 45.53 ? C5 DDQ 302 A 1 HETATM 10 C C6 DDQ . . . D 2 4.534 -22.447 1.287 1 39.84 ? C6 DDQ 302 A 1 HETATM 11 C C7 DDQ . . . D 2 4.762 -23.632 0.373 1 39.93 ? C7 DDQ 302 A 1 HETATM 12 C C8 DDQ . . . D 2 5.08 -24.842 1.22 1 41.89 ? C8 DDQ 302 A 1 HETATM 13 C C9 DDQ . . . D 2 4.795 -26.122 0.467 1 43.13 ? C9 DDQ 302 A 1 HETATM 14 C C10 DDQ . . . D 2 5.641 -26.259 -0.779 1 43.13 ? C10 DDQ 302 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #