data_5UXN # _model_server_result.job_id OlxbGGF9lBHTv7RnS253Hw _model_server_result.datetime_utc '2025-08-05 14:50:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uxn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 5UXN # _exptl.entry_id 5UXN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 181.189 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TYROSINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5UXN _cell.length_a 81.27 _cell.length_b 100.54 _cell.length_c 115.55 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UXN _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 81.27 0 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 81.27 0 115.55 4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 115.55 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 357 A HIS 352 1_555 D CO CO . A CO 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc2 A OE1 GLU 399 A GLU 394 1_555 D CO CO . A CO 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc3 A OE2 GLU 399 A GLU 394 1_555 D CO CO . A CO 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc4 A OD2 ASP 429 A ASP 424 1_555 D CO CO . A CO 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc5 D CO CO . A CO 503 1_555 H O HOH . A HOH 634 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? # _chem_comp.formula 'C9 H11 N O3' _chem_comp.formula_weight 181.189 _chem_comp.id TYR _chem_comp.mon_nstd_flag y _chem_comp.name TYROSINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TYR sing 352 n n N H TYR sing 353 n n N H2 TYR sing 354 n n CA C TYR sing 355 n n CA CB TYR sing 356 n n CA HA TYR sing 357 n n C O TYR doub 358 n n C OXT TYR sing 359 n n CB CG TYR sing 360 n n CB HB2 TYR sing 361 n n CB HB3 TYR sing 362 n n CG CD1 TYR doub 363 n y CG CD2 TYR sing 364 n y CD1 CE1 TYR sing 365 n y CD1 HD1 TYR sing 366 n n CD2 CE2 TYR doub 367 n y CD2 HD2 TYR sing 368 n n CE1 CZ TYR doub 369 n y CE1 HE1 TYR sing 370 n n CE2 CZ TYR sing 371 n y CE2 HE2 TYR sing 372 n n CZ OH TYR sing 373 n n OH HH TYR sing 374 n n OXT HXT TYR sing 375 n n # _atom_sites.entry_id 5UXN _atom_sites.fract_transf_matrix[1][1] 0.012305 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009946 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008654 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 501 1 PO4 PO4 . C 2 PO4 A 1 502 2 PO4 PO4 . D 3 CO A 1 503 1 CO CO . E 4 PEP A 1 504 1 PEP PEP . F 5 TYR A 1 505 1 TYR TYR . G 6 CL A 1 506 1 CL CL . H 7 HOH A 1 601 133 HOH HOH . H 7 HOH A 2 602 109 HOH HOH . H 7 HOH A 3 603 131 HOH HOH . H 7 HOH A 4 604 173 HOH HOH . H 7 HOH A 5 605 130 HOH HOH . H 7 HOH A 6 606 22 HOH HOH . H 7 HOH A 7 607 144 HOH HOH . H 7 HOH A 8 608 141 HOH HOH . H 7 HOH A 9 609 140 HOH HOH . H 7 HOH A 10 610 13 HOH HOH . H 7 HOH A 11 611 122 HOH HOH . H 7 HOH A 12 612 10 HOH HOH . H 7 HOH A 13 613 66 HOH HOH . H 7 HOH A 14 614 47 HOH HOH . H 7 HOH A 15 615 95 HOH HOH . H 7 HOH A 16 616 166 HOH HOH . H 7 HOH A 17 617 20 HOH HOH . H 7 HOH A 18 618 104 HOH HOH . H 7 HOH A 19 619 83 HOH HOH . H 7 HOH A 20 620 129 HOH HOH . H 7 HOH A 21 621 6 HOH HOH . H 7 HOH A 22 622 31 HOH HOH . H 7 HOH A 23 623 38 HOH HOH . H 7 HOH A 24 624 69 HOH HOH . H 7 HOH A 25 625 60 HOH HOH . H 7 HOH A 26 626 171 HOH HOH . H 7 HOH A 27 627 106 HOH HOH . H 7 HOH A 28 628 132 HOH HOH . H 7 HOH A 29 629 116 HOH HOH . H 7 HOH A 30 630 119 HOH HOH . H 7 HOH A 31 631 61 HOH HOH . H 7 HOH A 32 632 156 HOH HOH . H 7 HOH A 33 633 103 HOH HOH . H 7 HOH A 34 634 135 HOH HOH . H 7 HOH A 35 635 99 HOH HOH . H 7 HOH A 36 636 8 HOH HOH . H 7 HOH A 37 637 139 HOH HOH . H 7 HOH A 38 638 84 HOH HOH . H 7 HOH A 39 639 36 HOH HOH . H 7 HOH A 40 640 126 HOH HOH . H 7 HOH A 41 641 63 HOH HOH . H 7 HOH A 42 642 118 HOH HOH . H 7 HOH A 43 643 68 HOH HOH . H 7 HOH A 44 644 57 HOH HOH . H 7 HOH A 45 645 50 HOH HOH . H 7 HOH A 46 646 86 HOH HOH . H 7 HOH A 47 647 39 HOH HOH . H 7 HOH A 48 648 136 HOH HOH . H 7 HOH A 49 649 157 HOH HOH . H 7 HOH A 50 650 74 HOH HOH . H 7 HOH A 51 651 7 HOH HOH . H 7 HOH A 52 652 85 HOH HOH . H 7 HOH A 53 653 143 HOH HOH . H 7 HOH A 54 654 125 HOH HOH . H 7 HOH A 55 655 147 HOH HOH . H 7 HOH A 56 656 73 HOH HOH . H 7 HOH A 57 657 117 HOH HOH . H 7 HOH A 58 658 43 HOH HOH . H 7 HOH A 59 659 90 HOH HOH . H 7 HOH A 60 660 108 HOH HOH . H 7 HOH A 61 661 65 HOH HOH . H 7 HOH A 62 662 4 HOH HOH . H 7 HOH A 63 663 32 HOH HOH . H 7 HOH A 64 664 35 HOH HOH . H 7 HOH A 65 665 127 HOH HOH . H 7 HOH A 66 666 172 HOH HOH . H 7 HOH A 67 667 52 HOH HOH . H 7 HOH A 68 668 97 HOH HOH . H 7 HOH A 69 669 161 HOH HOH . H 7 HOH A 70 670 55 HOH HOH . H 7 HOH A 71 671 28 HOH HOH . H 7 HOH A 72 672 45 HOH HOH . H 7 HOH A 73 673 120 HOH HOH . H 7 HOH A 74 674 29 HOH HOH . H 7 HOH A 75 675 48 HOH HOH . H 7 HOH A 76 676 17 HOH HOH . H 7 HOH A 77 677 124 HOH HOH . H 7 HOH A 78 678 11 HOH HOH . H 7 HOH A 79 679 19 HOH HOH . H 7 HOH A 80 680 25 HOH HOH . H 7 HOH A 81 681 26 HOH HOH . H 7 HOH A 82 682 148 HOH HOH . H 7 HOH A 83 683 71 HOH HOH . H 7 HOH A 84 684 151 HOH HOH . H 7 HOH A 85 685 56 HOH HOH . H 7 HOH A 86 686 1 HOH HOH . H 7 HOH A 87 687 80 HOH HOH . H 7 HOH A 88 688 23 HOH HOH . H 7 HOH A 89 689 154 HOH HOH . H 7 HOH A 90 690 15 HOH HOH . H 7 HOH A 91 691 87 HOH HOH . H 7 HOH A 92 692 180 HOH HOH . H 7 HOH A 93 693 102 HOH HOH . H 7 HOH A 94 694 21 HOH HOH . H 7 HOH A 95 695 89 HOH HOH . H 7 HOH A 96 696 34 HOH HOH . H 7 HOH A 97 697 18 HOH HOH . H 7 HOH A 98 698 121 HOH HOH . H 7 HOH A 99 699 112 HOH HOH . H 7 HOH A 100 700 137 HOH HOH . H 7 HOH A 101 701 78 HOH HOH . H 7 HOH A 102 702 181 HOH HOH . H 7 HOH A 103 703 2 HOH HOH . H 7 HOH A 104 704 177 HOH HOH . H 7 HOH A 105 705 27 HOH HOH . H 7 HOH A 106 706 98 HOH HOH . H 7 HOH A 107 707 93 HOH HOH . H 7 HOH A 108 708 37 HOH HOH . H 7 HOH A 109 709 77 HOH HOH . H 7 HOH A 110 710 160 HOH HOH . H 7 HOH A 111 711 179 HOH HOH . H 7 HOH A 112 712 159 HOH HOH . H 7 HOH A 113 713 58 HOH HOH . H 7 HOH A 114 714 67 HOH HOH . H 7 HOH A 115 715 149 HOH HOH . H 7 HOH A 116 716 16 HOH HOH . H 7 HOH A 117 717 33 HOH HOH . H 7 HOH A 118 718 70 HOH HOH . H 7 HOH A 119 719 128 HOH HOH . H 7 HOH A 120 720 142 HOH HOH . H 7 HOH A 121 721 64 HOH HOH . H 7 HOH A 122 722 53 HOH HOH . H 7 HOH A 123 723 9 HOH HOH . H 7 HOH A 124 724 62 HOH HOH . H 7 HOH A 125 725 14 HOH HOH . H 7 HOH A 126 726 88 HOH HOH . H 7 HOH A 127 727 51 HOH HOH . H 7 HOH A 128 728 54 HOH HOH . H 7 HOH A 129 729 174 HOH HOH . H 7 HOH A 130 730 12 HOH HOH . H 7 HOH A 131 731 178 HOH HOH . H 7 HOH A 132 732 168 HOH HOH . H 7 HOH A 133 733 167 HOH HOH . H 7 HOH A 134 734 153 HOH HOH . H 7 HOH A 135 735 113 HOH HOH . H 7 HOH A 136 736 105 HOH HOH . H 7 HOH A 137 737 41 HOH HOH . H 7 HOH A 138 738 92 HOH HOH . H 7 HOH A 139 739 146 HOH HOH . H 7 HOH A 140 740 169 HOH HOH . H 7 HOH A 141 741 138 HOH HOH . H 7 HOH A 142 742 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TYR . . . F 5 37.688 6.785 47.724 1 20.8 ? N TYR 505 A 1 HETATM 2 C CA TYR . . . F 5 36.648 7.771 48.058 1 19.95 ? CA TYR 505 A 1 HETATM 3 C C TYR . . . F 5 35.585 7.891 47.014 1 23.31 ? C TYR 505 A 1 HETATM 4 O O TYR . . . F 5 35.741 7.404 45.888 1 26.5 ? O TYR 505 A 1 HETATM 5 C CB TYR . . . F 5 37.266 9.156 48.321 1 18.4 ? CB TYR 505 A 1 HETATM 6 C CG TYR . . . F 5 37.949 9.781 47.176 1 16.71 ? CG TYR 505 A 1 HETATM 7 C CD1 TYR . . . F 5 39.294 9.555 46.937 1 15.15 ? CD1 TYR 505 A 1 HETATM 8 C CD2 TYR . . . F 5 37.282 10.67 46.347 1 16.25 ? CD2 TYR 505 A 1 HETATM 9 C CE1 TYR . . . F 5 39.928 10.152 45.883 1 14.89 ? CE1 TYR 505 A 1 HETATM 10 C CE2 TYR . . . F 5 37.928 11.28 45.29 1 15.91 ? CE2 TYR 505 A 1 HETATM 11 C CZ TYR . . . F 5 39.255 11.009 45.051 1 15.7 ? CZ TYR 505 A 1 HETATM 12 O OH TYR . . . F 5 39.917 11.63 44.005 1 17.61 ? OH TYR 505 A 1 HETATM 13 O OXT TYR . . . F 5 34.576 8.542 47.272 1 22.87 ? OXT TYR 505 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #