data_5UY8
#
_model_server_result.job_id            WSIcZSlv7KIfFtOrPyvcvg 
_model_server_result.datetime_utc      '2024-10-10 07:23:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5uy8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":604}' 
#
_entry.id    5UY8 
#
_exptl.entry_id    5UY8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         113.16 
_cell.angle_beta          99.39 
_cell.angle_gamma         95.5 
_cell.entry_id            5UY8 
_cell.length_a            61.575 
_cell.length_b            104.226 
_cell.length_c            105.473 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5UY8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,T,U 1 1 
C,D,L,M,N,O,P,Q,R,S,V,W 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 K N N 
? 4 O N N 
? 4 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O VAL 434 A VAL 425 1_555 H MG MG . A MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc2 A O THR 437 A THR 428 1_555 H MG MG . A MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc3 A OD1 ASP 548 A ASP 539 1_555 H MG MG . A MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc4 A O LEU 598 A LEU 589 1_555 H MG MG . A MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? 
metalc ? metalc5 B O VAL 434 B VAL 425 1_555 K MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
metalc ? metalc6 B O THR 437 B THR 428 1_555 K MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc7 B OD1 ASP 548 B ASP 539 1_555 K MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc8 B O LEU 598 B LEU 589 1_555 K MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? 
metalc ? metalc9 C O VAL 434 C VAL 425 1_555 O MG MG . C MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc10 C O THR 437 C THR 428 1_555 O MG MG . C MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? 
metalc ? metalc11 C OD1 ASP 548 C ASP 539 1_555 O MG MG . C MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc12 C O LEU 598 C LEU 589 1_555 O MG MG . C MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? 
metalc ? metalc13 D O VAL 434 D VAL 425 1_555 S MG MG . D MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc14 D O THR 437 D THR 428 1_555 S MG MG . D MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? 
metalc ? metalc15 D OD1 ASP 548 D ASP 539 1_555 S MG MG . D MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc16 D O LEU 598 D LEU 589 1_555 S MG MG . D MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5UY8 
_atom_sites.fract_transf_matrix[1][1]    0.01624 
_atom_sites.fract_transf_matrix[1][2]    0.001564 
_atom_sites.fract_transf_matrix[1][3]    0.00367 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009639 
_atom_sites.fract_transf_matrix[2][3]    0.004415 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01057 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 8UM A 1 601 1 8UM SX1 . 
F 3 AMZ A 1 602 1 AMZ AMZ . 
G 3 AMZ A 1 603 5 AMZ AMZ . 
H 4 MG A 1 604 8 MG MG . 
I 2 8UM B 1 601 2 8UM SX1 . 
J 3 AMZ B 1 602 2 AMZ AMZ . 
K 4 MG B 1 603 9 MG MG . 
L 2 8UM C 1 601 3 8UM SX1 . 
M 3 AMZ C 1 602 3 AMZ AMZ . 
N 3 AMZ C 1 603 6 AMZ AMZ . 
O 4 MG C 1 604 10 MG MG . 
P 2 8UM D 1 601 4 8UM SX1 . 
Q 3 AMZ D 1 602 4 AMZ AMZ . 
R 3 AMZ D 1 603 7 AMZ AMZ . 
S 4 MG D 1 604 11 MG MG . 
T 5 HOH A 1 701 85 HOH HOH . 
T 5 HOH A 2 702 123 HOH HOH . 
T 5 HOH A 3 703 48 HOH HOH . 
T 5 HOH A 4 704 51 HOH HOH . 
T 5 HOH A 5 705 115 HOH HOH . 
T 5 HOH A 6 706 193 HOH HOH . 
T 5 HOH A 7 707 166 HOH HOH . 
T 5 HOH A 8 708 146 HOH HOH . 
T 5 HOH A 9 709 176 HOH HOH . 
T 5 HOH A 10 710 68 HOH HOH . 
T 5 HOH A 11 711 151 HOH HOH . 
T 5 HOH A 12 712 5 HOH HOH . 
T 5 HOH A 13 713 46 HOH HOH . 
T 5 HOH A 14 714 182 HOH HOH . 
T 5 HOH A 15 715 41 HOH HOH . 
T 5 HOH A 16 716 72 HOH HOH . 
T 5 HOH A 17 717 97 HOH HOH . 
T 5 HOH A 18 718 122 HOH HOH . 
T 5 HOH A 19 719 181 HOH HOH . 
T 5 HOH A 20 720 130 HOH HOH . 
T 5 HOH A 21 721 59 HOH HOH . 
T 5 HOH A 22 722 77 HOH HOH . 
T 5 HOH A 23 723 156 HOH HOH . 
T 5 HOH A 24 724 37 HOH HOH . 
T 5 HOH A 25 725 8 HOH HOH . 
T 5 HOH A 26 726 89 HOH HOH . 
T 5 HOH A 27 727 83 HOH HOH . 
T 5 HOH A 28 728 121 HOH HOH . 
T 5 HOH A 29 729 116 HOH HOH . 
T 5 HOH A 30 730 22 HOH HOH . 
T 5 HOH A 31 731 96 HOH HOH . 
T 5 HOH A 32 732 170 HOH HOH . 
T 5 HOH A 33 733 16 HOH HOH . 
T 5 HOH A 34 734 143 HOH HOH . 
T 5 HOH A 35 735 65 HOH HOH . 
T 5 HOH A 36 736 6 HOH HOH . 
T 5 HOH A 37 737 14 HOH HOH . 
T 5 HOH A 38 738 198 HOH HOH . 
T 5 HOH A 39 739 179 HOH HOH . 
T 5 HOH A 40 740 129 HOH HOH . 
T 5 HOH A 41 741 118 HOH HOH . 
T 5 HOH A 42 742 21 HOH HOH . 
T 5 HOH A 43 743 66 HOH HOH . 
T 5 HOH A 44 744 185 HOH HOH . 
T 5 HOH A 45 745 201 HOH HOH . 
T 5 HOH A 46 746 35 HOH HOH . 
T 5 HOH A 47 747 26 HOH HOH . 
T 5 HOH A 48 748 58 HOH HOH . 
T 5 HOH A 49 749 19 HOH HOH . 
T 5 HOH A 50 750 124 HOH HOH . 
U 5 HOH B 1 701 177 HOH HOH . 
U 5 HOH B 2 702 144 HOH HOH . 
U 5 HOH B 3 703 79 HOH HOH . 
U 5 HOH B 4 704 167 HOH HOH . 
U 5 HOH B 5 705 76 HOH HOH . 
U 5 HOH B 6 706 74 HOH HOH . 
U 5 HOH B 7 707 127 HOH HOH . 
U 5 HOH B 8 708 109 HOH HOH . 
U 5 HOH B 9 709 12 HOH HOH . 
U 5 HOH B 10 710 112 HOH HOH . 
U 5 HOH B 11 711 28 HOH HOH . 
U 5 HOH B 12 712 29 HOH HOH . 
U 5 HOH B 13 713 191 HOH HOH . 
U 5 HOH B 14 714 178 HOH HOH . 
U 5 HOH B 15 715 195 HOH HOH . 
U 5 HOH B 16 716 17 HOH HOH . 
U 5 HOH B 17 717 67 HOH HOH . 
U 5 HOH B 18 718 1 HOH HOH . 
U 5 HOH B 19 719 36 HOH HOH . 
U 5 HOH B 20 720 196 HOH HOH . 
U 5 HOH B 21 721 99 HOH HOH . 
U 5 HOH B 22 722 25 HOH HOH . 
U 5 HOH B 23 723 11 HOH HOH . 
U 5 HOH B 24 724 23 HOH HOH . 
U 5 HOH B 25 725 44 HOH HOH . 
U 5 HOH B 26 726 142 HOH HOH . 
U 5 HOH B 27 727 101 HOH HOH . 
U 5 HOH B 28 728 91 HOH HOH . 
U 5 HOH B 29 729 73 HOH HOH . 
U 5 HOH B 30 730 131 HOH HOH . 
U 5 HOH B 31 731 153 HOH HOH . 
U 5 HOH B 32 732 164 HOH HOH . 
U 5 HOH B 33 733 2 HOH HOH . 
U 5 HOH B 34 734 54 HOH HOH . 
U 5 HOH B 35 735 149 HOH HOH . 
U 5 HOH B 36 736 133 HOH HOH . 
U 5 HOH B 37 737 139 HOH HOH . 
U 5 HOH B 38 738 160 HOH HOH . 
U 5 HOH B 39 739 57 HOH HOH . 
U 5 HOH B 40 740 38 HOH HOH . 
U 5 HOH B 41 741 70 HOH HOH . 
U 5 HOH B 42 742 140 HOH HOH . 
U 5 HOH B 43 743 86 HOH HOH . 
U 5 HOH B 44 744 75 HOH HOH . 
U 5 HOH B 45 745 55 HOH HOH . 
U 5 HOH B 46 746 52 HOH HOH . 
U 5 HOH B 47 747 163 HOH HOH . 
U 5 HOH B 48 748 147 HOH HOH . 
U 5 HOH B 49 749 188 HOH HOH . 
U 5 HOH B 50 750 93 HOH HOH . 
U 5 HOH B 51 751 126 HOH HOH . 
U 5 HOH B 52 752 90 HOH HOH . 
U 5 HOH B 53 753 207 HOH HOH . 
U 5 HOH B 54 754 69 HOH HOH . 
U 5 HOH B 55 755 62 HOH HOH . 
U 5 HOH B 56 756 81 HOH HOH . 
U 5 HOH B 57 757 203 HOH HOH . 
U 5 HOH B 58 758 204 HOH HOH . 
U 5 HOH B 59 759 192 HOH HOH . 
U 5 HOH B 60 760 200 HOH HOH . 
U 5 HOH B 61 761 134 HOH HOH . 
V 5 HOH C 1 701 119 HOH HOH . 
V 5 HOH C 2 702 137 HOH HOH . 
V 5 HOH C 3 703 180 HOH HOH . 
V 5 HOH C 4 704 107 HOH HOH . 
V 5 HOH C 5 705 135 HOH HOH . 
V 5 HOH C 6 706 152 HOH HOH . 
V 5 HOH C 7 707 120 HOH HOH . 
V 5 HOH C 8 708 95 HOH HOH . 
V 5 HOH C 9 709 4 HOH HOH . 
V 5 HOH C 10 710 155 HOH HOH . 
V 5 HOH C 11 711 106 HOH HOH . 
V 5 HOH C 12 712 162 HOH HOH . 
V 5 HOH C 13 713 27 HOH HOH . 
V 5 HOH C 14 714 145 HOH HOH . 
V 5 HOH C 15 715 33 HOH HOH . 
V 5 HOH C 16 716 105 HOH HOH . 
V 5 HOH C 17 717 49 HOH HOH . 
V 5 HOH C 18 718 60 HOH HOH . 
V 5 HOH C 19 719 172 HOH HOH . 
V 5 HOH C 20 720 148 HOH HOH . 
V 5 HOH C 21 721 125 HOH HOH . 
V 5 HOH C 22 722 102 HOH HOH . 
V 5 HOH C 23 723 169 HOH HOH . 
V 5 HOH C 24 724 202 HOH HOH . 
V 5 HOH C 25 725 56 HOH HOH . 
V 5 HOH C 26 726 132 HOH HOH . 
V 5 HOH C 27 727 136 HOH HOH . 
V 5 HOH C 28 728 189 HOH HOH . 
V 5 HOH C 29 729 18 HOH HOH . 
V 5 HOH C 30 730 128 HOH HOH . 
V 5 HOH C 31 731 194 HOH HOH . 
V 5 HOH C 32 732 9 HOH HOH . 
V 5 HOH C 33 733 159 HOH HOH . 
V 5 HOH C 34 734 84 HOH HOH . 
V 5 HOH C 35 735 15 HOH HOH . 
V 5 HOH C 36 736 63 HOH HOH . 
V 5 HOH C 37 737 13 HOH HOH . 
V 5 HOH C 38 738 197 HOH HOH . 
V 5 HOH C 39 739 183 HOH HOH . 
V 5 HOH C 40 740 32 HOH HOH . 
V 5 HOH C 41 741 30 HOH HOH . 
V 5 HOH C 42 742 184 HOH HOH . 
V 5 HOH C 43 743 42 HOH HOH . 
V 5 HOH C 44 744 20 HOH HOH . 
V 5 HOH C 45 745 175 HOH HOH . 
V 5 HOH C 46 746 206 HOH HOH . 
W 5 HOH D 1 701 47 HOH HOH . 
W 5 HOH D 2 702 114 HOH HOH . 
W 5 HOH D 3 703 88 HOH HOH . 
W 5 HOH D 4 704 80 HOH HOH . 
W 5 HOH D 5 705 39 HOH HOH . 
W 5 HOH D 6 706 34 HOH HOH . 
W 5 HOH D 7 707 110 HOH HOH . 
W 5 HOH D 8 708 98 HOH HOH . 
W 5 HOH D 9 709 45 HOH HOH . 
W 5 HOH D 10 710 50 HOH HOH . 
W 5 HOH D 11 711 71 HOH HOH . 
W 5 HOH D 12 712 103 HOH HOH . 
W 5 HOH D 13 713 174 HOH HOH . 
W 5 HOH D 14 714 158 HOH HOH . 
W 5 HOH D 15 715 61 HOH HOH . 
W 5 HOH D 16 716 150 HOH HOH . 
W 5 HOH D 17 717 173 HOH HOH . 
W 5 HOH D 18 718 168 HOH HOH . 
W 5 HOH D 19 719 3 HOH HOH . 
W 5 HOH D 20 720 94 HOH HOH . 
W 5 HOH D 21 721 186 HOH HOH . 
W 5 HOH D 22 722 64 HOH HOH . 
W 5 HOH D 23 723 171 HOH HOH . 
W 5 HOH D 24 724 138 HOH HOH . 
W 5 HOH D 25 725 111 HOH HOH . 
W 5 HOH D 26 726 154 HOH HOH . 
W 5 HOH D 27 727 40 HOH HOH . 
W 5 HOH D 28 728 53 HOH HOH . 
W 5 HOH D 29 729 108 HOH HOH . 
W 5 HOH D 30 730 113 HOH HOH . 
W 5 HOH D 31 731 10 HOH HOH . 
W 5 HOH D 32 732 78 HOH HOH . 
W 5 HOH D 33 733 187 HOH HOH . 
W 5 HOH D 34 734 117 HOH HOH . 
W 5 HOH D 35 735 24 HOH HOH . 
W 5 HOH D 36 736 31 HOH HOH . 
W 5 HOH D 37 737 161 HOH HOH . 
W 5 HOH D 38 738 82 HOH HOH . 
W 5 HOH D 39 739 104 HOH HOH . 
W 5 HOH D 40 740 7 HOH HOH . 
W 5 HOH D 41 741 190 HOH HOH . 
W 5 HOH D 42 742 92 HOH HOH . 
W 5 HOH D 43 743 157 HOH HOH . 
W 5 HOH D 44 744 165 HOH HOH . 
W 5 HOH D 45 745 43 HOH HOH . 
W 5 HOH D 46 746 87 HOH HOH . 
W 5 HOH D 47 747 141 HOH HOH . 
W 5 HOH D 48 748 100 HOH HOH . 
W 5 HOH D 49 749 199 HOH HOH . 
W 5 HOH D 50 750 205 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         S 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -25.006 
_atom_site.Cartn_y               7.598 
_atom_site.Cartn_z               -14.812 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        24.51 
_atom_site.pdbx_formal_charge    2 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           604 
_atom_site.auth_asym_id          D 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#