data_5V0I
#
_model_server_result.job_id            Ub7FCIJXWXBfr2YxWvj8Lg 
_model_server_result.datetime_utc      '2024-11-18 21:25:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5v0i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    5V0I 
#
_exptl.entry_id    5V0I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              204.225 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            TRYPTOPHAN 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5V0I 
_cell.length_a            46.745 
_cell.length_b            110.807 
_cell.length_c            128.599 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5V0I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
_chem_comp.formula           'C11 H12 N2 O2' 
_chem_comp.formula_weight    204.225 
_chem_comp.id                TRP 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              TRYPTOPHAN 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA TRP sing 349 n n 
N H TRP sing 350 n n 
N H2 TRP sing 351 n n 
CA C TRP sing 352 n n 
CA CB TRP sing 353 n n 
CA HA TRP sing 354 n n 
C O TRP doub 355 n n 
C OXT TRP sing 356 n n 
CB CG TRP sing 357 n n 
CB HB2 TRP sing 358 n n 
CB HB3 TRP sing 359 n n 
CG CD1 TRP doub 360 n y 
CG CD2 TRP sing 361 n y 
CD1 NE1 TRP sing 362 n y 
CD1 HD1 TRP sing 363 n n 
CD2 CE2 TRP doub 364 n y 
CD2 CE3 TRP sing 365 n y 
NE1 CE2 TRP sing 366 n y 
NE1 HE1 TRP sing 367 n n 
CE2 CZ2 TRP sing 368 n y 
CE3 CZ3 TRP doub 369 n y 
CE3 HE3 TRP sing 370 n n 
CZ2 CH2 TRP doub 371 n y 
CZ2 HZ2 TRP sing 372 n n 
CZ3 CH2 TRP sing 373 n y 
CZ3 HZ3 TRP sing 374 n n 
CH2 HH2 TRP sing 375 n n 
OXT HXT TRP sing 376 n n 
#
_atom_sites.entry_id                     5V0I 
_atom_sites.fract_transf_matrix[1][1]    0.021393 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009025 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007776 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 AMP A 1 401 340 AMP AMP . 
D 3 TRP A 1 402 341 TRP TRP . 
E 4 FMT A 1 403 342 FMT FMT . 
F 4 FMT A 1 404 343 FMT FMT . 
G 2 AMP B 1 401 340 AMP AMP . 
H 3 TRP B 1 402 341 TRP TRP . 
I 4 FMT B 1 403 342 FMT FMT . 
J 4 FMT B 1 404 343 FMT FMT . 
K 5 HOH A 1 501 124 HOH HOH . 
K 5 HOH A 2 502 121 HOH HOH . 
K 5 HOH A 3 503 99 HOH HOH . 
K 5 HOH A 4 504 89 HOH HOH . 
K 5 HOH A 5 505 19 HOH HOH . 
K 5 HOH A 6 506 84 HOH HOH . 
K 5 HOH A 7 507 73 HOH HOH . 
K 5 HOH A 8 508 57 HOH HOH . 
K 5 HOH A 9 509 111 HOH HOH . 
K 5 HOH A 10 510 65 HOH HOH . 
K 5 HOH A 11 511 58 HOH HOH . 
K 5 HOH A 12 512 95 HOH HOH . 
K 5 HOH A 13 513 110 HOH HOH . 
K 5 HOH A 14 514 2 HOH HOH . 
K 5 HOH A 15 515 18 HOH HOH . 
K 5 HOH A 16 516 12 HOH HOH . 
K 5 HOH A 17 517 74 HOH HOH . 
K 5 HOH A 18 518 75 HOH HOH . 
K 5 HOH A 19 519 123 HOH HOH . 
K 5 HOH A 20 520 120 HOH HOH . 
K 5 HOH A 21 521 21 HOH HOH . 
K 5 HOH A 22 522 23 HOH HOH . 
K 5 HOH A 23 523 4 HOH HOH . 
K 5 HOH A 24 524 77 HOH HOH . 
K 5 HOH A 25 525 41 HOH HOH . 
K 5 HOH A 26 526 114 HOH HOH . 
K 5 HOH A 27 527 49 HOH HOH . 
K 5 HOH A 28 528 9 HOH HOH . 
K 5 HOH A 29 529 35 HOH HOH . 
K 5 HOH A 30 530 37 HOH HOH . 
K 5 HOH A 31 531 33 HOH HOH . 
K 5 HOH A 32 532 85 HOH HOH . 
K 5 HOH A 33 533 43 HOH HOH . 
K 5 HOH A 34 534 14 HOH HOH . 
K 5 HOH A 35 535 3 HOH HOH . 
K 5 HOH A 36 536 7 HOH HOH . 
K 5 HOH A 37 537 68 HOH HOH . 
K 5 HOH A 38 538 109 HOH HOH . 
K 5 HOH A 39 539 98 HOH HOH . 
K 5 HOH A 40 540 112 HOH HOH . 
K 5 HOH A 41 541 82 HOH HOH . 
K 5 HOH A 42 542 39 HOH HOH . 
K 5 HOH A 43 543 52 HOH HOH . 
K 5 HOH A 44 544 34 HOH HOH . 
K 5 HOH A 45 545 113 HOH HOH . 
K 5 HOH A 46 546 45 HOH HOH . 
K 5 HOH A 47 547 88 HOH HOH . 
K 5 HOH A 48 548 11 HOH HOH . 
K 5 HOH A 49 549 106 HOH HOH . 
K 5 HOH A 50 550 20 HOH HOH . 
K 5 HOH A 51 551 53 HOH HOH . 
K 5 HOH A 52 552 103 HOH HOH . 
K 5 HOH A 53 553 55 HOH HOH . 
K 5 HOH A 54 554 40 HOH HOH . 
K 5 HOH A 55 555 80 HOH HOH . 
K 5 HOH A 56 556 87 HOH HOH . 
K 5 HOH A 57 557 101 HOH HOH . 
K 5 HOH A 58 558 46 HOH HOH . 
K 5 HOH A 59 559 100 HOH HOH . 
K 5 HOH A 60 560 102 HOH HOH . 
K 5 HOH A 61 561 119 HOH HOH . 
K 5 HOH A 62 562 86 HOH HOH . 
K 5 HOH A 63 563 107 HOH HOH . 
K 5 HOH A 64 564 122 HOH HOH . 
K 5 HOH A 65 565 56 HOH HOH . 
K 5 HOH A 66 566 96 HOH HOH . 
K 5 HOH A 67 567 116 HOH HOH . 
K 5 HOH A 68 568 78 HOH HOH . 
L 5 HOH B 1 501 97 HOH HOH . 
L 5 HOH B 2 502 50 HOH HOH . 
L 5 HOH B 3 503 6 HOH HOH . 
L 5 HOH B 4 504 108 HOH HOH . 
L 5 HOH B 5 505 8 HOH HOH . 
L 5 HOH B 6 506 129 HOH HOH . 
L 5 HOH B 7 507 10 HOH HOH . 
L 5 HOH B 8 508 93 HOH HOH . 
L 5 HOH B 9 509 17 HOH HOH . 
L 5 HOH B 10 510 70 HOH HOH . 
L 5 HOH B 11 511 30 HOH HOH . 
L 5 HOH B 12 512 62 HOH HOH . 
L 5 HOH B 13 513 5 HOH HOH . 
L 5 HOH B 14 514 22 HOH HOH . 
L 5 HOH B 15 515 92 HOH HOH . 
L 5 HOH B 16 516 105 HOH HOH . 
L 5 HOH B 17 517 54 HOH HOH . 
L 5 HOH B 18 518 81 HOH HOH . 
L 5 HOH B 19 519 125 HOH HOH . 
L 5 HOH B 20 520 117 HOH HOH . 
L 5 HOH B 21 521 29 HOH HOH . 
L 5 HOH B 22 522 127 HOH HOH . 
L 5 HOH B 23 523 28 HOH HOH . 
L 5 HOH B 24 524 115 HOH HOH . 
L 5 HOH B 25 525 66 HOH HOH . 
L 5 HOH B 26 526 128 HOH HOH . 
L 5 HOH B 27 527 26 HOH HOH . 
L 5 HOH B 28 528 132 HOH HOH . 
L 5 HOH B 29 529 48 HOH HOH . 
L 5 HOH B 30 530 31 HOH HOH . 
L 5 HOH B 31 531 15 HOH HOH . 
L 5 HOH B 32 532 44 HOH HOH . 
L 5 HOH B 33 533 16 HOH HOH . 
L 5 HOH B 34 534 67 HOH HOH . 
L 5 HOH B 35 535 24 HOH HOH . 
L 5 HOH B 36 536 83 HOH HOH . 
L 5 HOH B 37 537 32 HOH HOH . 
L 5 HOH B 38 538 131 HOH HOH . 
L 5 HOH B 39 539 76 HOH HOH . 
L 5 HOH B 40 540 90 HOH HOH . 
L 5 HOH B 41 541 59 HOH HOH . 
L 5 HOH B 42 542 51 HOH HOH . 
L 5 HOH B 43 543 118 HOH HOH . 
L 5 HOH B 44 544 13 HOH HOH . 
L 5 HOH B 45 545 27 HOH HOH . 
L 5 HOH B 46 546 38 HOH HOH . 
L 5 HOH B 47 547 61 HOH HOH . 
L 5 HOH B 48 548 47 HOH HOH . 
L 5 HOH B 49 549 94 HOH HOH . 
L 5 HOH B 50 550 69 HOH HOH . 
L 5 HOH B 51 551 104 HOH HOH . 
L 5 HOH B 52 552 71 HOH HOH . 
L 5 HOH B 53 553 60 HOH HOH . 
L 5 HOH B 54 554 36 HOH HOH . 
L 5 HOH B 55 555 126 HOH HOH . 
L 5 HOH B 56 556 25 HOH HOH . 
L 5 HOH B 57 557 130 HOH HOH . 
L 5 HOH B 58 558 79 HOH HOH . 
L 5 HOH B 59 559 1 HOH HOH . 
L 5 HOH B 60 560 63 HOH HOH . 
L 5 HOH B 61 561 91 HOH HOH . 
L 5 HOH B 62 562 42 HOH HOH . 
L 5 HOH B 63 563 64 HOH HOH . 
L 5 HOH B 64 564 72 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N TRP . . . D 3 16.729 9.553 16.896 1 97.19 ? N TRP 402 A 1 
HETATM 2 C CA TRP . . . D 3 17.385 9.673 15.598 1 96.23 ? CA TRP 402 A 1 
HETATM 3 C C TRP . . . D 3 18.777 9.056 15.627 1 92.05 ? C TRP 402 A 1 
HETATM 4 O O TRP . . . D 3 19.379 8.809 14.582 1 90.08 ? O TRP 402 A 1 
HETATM 5 C CB TRP . . . D 3 17.482 11.139 15.169 1 96.48 ? CB TRP 402 A 1 
HETATM 6 C CG TRP . . . D 3 16.161 11.8 14.976 1 100.68 ? CG TRP 402 A 1 
HETATM 7 C CD1 TRP . . . D 3 15.66 12.847 15.689 1 104.8 ? CD1 TRP 402 A 1 
HETATM 8 C CD2 TRP . . . D 3 15.164 11.463 14.002 1 104.85 ? CD2 TRP 402 A 1 
HETATM 9 N NE1 TRP . . . D 3 14.413 13.187 15.22 1 108.9 ? NE1 TRP 402 A 1 
HETATM 10 C CE2 TRP . . . D 3 14.086 12.351 14.184 1 108.17 ? CE2 TRP 402 A 1 
HETATM 11 C CE3 TRP . . . D 3 15.078 10.495 12.996 1 103.31 ? CE3 TRP 402 A 1 
HETATM 12 C CZ2 TRP . . . D 3 12.936 12.299 13.401 1 111.45 ? CZ2 TRP 402 A 1 
HETATM 13 C CZ3 TRP . . . D 3 13.935 10.448 12.216 1 107.26 ? CZ3 TRP 402 A 1 
HETATM 14 C CH2 TRP . . . D 3 12.881 11.344 12.424 1 111.26 ? CH2 TRP 402 A 1 
HETATM 15 O OXT TRP . . . D 3 19.331 8.801 16.698 1 89.85 ? OXT TRP 402 A 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           15 
#