data_5V18
#
_model_server_result.job_id            BzXtSlWfTN6BFqsYBd-3SA 
_model_server_result.datetime_utc      '2025-01-25 08:21:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5v18 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    5V18 
#
_exptl.entry_id    5V18 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              220.229 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-([1,2,4]triazolo[1,5-a]pyridin-5-yl)benzonitrile 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5V18 
_cell.length_a            72.528 
_cell.length_b            72.528 
_cell.length_c            45.642 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5V18 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 136 A HIS 313 1_555 E FE FE2 . A FE2 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc2 A OD1 ASP 138 A ASP 315 1_555 E FE FE2 . A FE2 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? 
metalc ? metalc3 A NE2 HIS 197 A HIS 374 1_555 E FE FE2 . A FE2 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc4 D N14 8UY . A 8UY 503 1_555 E FE FE2 . A FE2 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc5 E FE FE2 . A FE2 504 1_555 F O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
metalc ? metalc6 E FE FE2 . A FE2 504 1_555 F O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
#
_chem_comp.formula           'C13 H8 N4' 
_chem_comp.formula_weight    220.229 
_chem_comp.id                8UY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-([1,2,4]triazolo[1,5-a]pyridin-5-yl)benzonitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 8UY trip 1 n n 
C2 C3 8UY sing 2 n n 
C3 C4 8UY doub 3 n y 
C3 C8 8UY sing 4 n y 
C4 C5 8UY sing 5 n y 
C8 C7 8UY doub 6 n y 
C5 C6 8UY doub 7 n y 
C7 C6 8UY sing 8 n y 
C6 C9 8UY sing 9 n n 
C9 C10 8UY doub 10 n y 
C9 N17 8UY sing 11 n y 
C10 C11 8UY sing 12 n y 
N17 N16 8UY sing 13 n y 
N17 C13 8UY sing 14 n y 
N16 C15 8UY doub 15 n y 
C11 C12 8UY doub 16 n y 
C13 C12 8UY sing 17 n y 
C13 N14 8UY doub 18 n y 
C15 N14 8UY sing 19 n y 
C4 H1 8UY sing 20 n n 
C5 H2 8UY sing 21 n n 
C7 H3 8UY sing 22 n n 
C8 H4 8UY sing 23 n n 
C10 H5 8UY sing 24 n n 
C15 H6 8UY sing 25 n n 
C11 H7 8UY sing 26 n n 
C12 H8 8UY sing 27 n n 
#
_atom_sites.entry_id                     5V18 
_atom_sites.fract_transf_matrix[1][1]    0.013788 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013788 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02191 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 501 498 SO4 SO4 . 
C 2 SO4 A 1 502 499 SO4 SO4 . 
D 3 8UY A 1 503 500 8UY LIG . 
E 4 FE2 A 1 504 501 FE2 FE2 . 
F 5 HOH A 1 601 526 HOH HOH . 
F 5 HOH A 2 602 502 HOH HOH . 
F 5 HOH A 3 603 515 HOH HOH . 
F 5 HOH A 4 604 533 HOH HOH . 
F 5 HOH A 5 605 528 HOH HOH . 
F 5 HOH A 6 606 517 HOH HOH . 
F 5 HOH A 7 607 505 HOH HOH . 
F 5 HOH A 8 608 529 HOH HOH . 
F 5 HOH A 9 609 509 HOH HOH . 
F 5 HOH A 10 610 530 HOH HOH . 
F 5 HOH A 11 611 525 HOH HOH . 
F 5 HOH A 12 612 506 HOH HOH . 
F 5 HOH A 13 613 507 HOH HOH . 
F 5 HOH A 14 614 504 HOH HOH . 
F 5 HOH A 15 615 514 HOH HOH . 
F 5 HOH A 16 616 511 HOH HOH . 
F 5 HOH A 17 617 503 HOH HOH . 
F 5 HOH A 18 618 527 HOH HOH . 
F 5 HOH A 19 619 518 HOH HOH . 
F 5 HOH A 20 620 513 HOH HOH . 
F 5 HOH A 21 621 521 HOH HOH . 
F 5 HOH A 22 622 531 HOH HOH . 
F 5 HOH A 23 623 524 HOH HOH . 
F 5 HOH A 24 624 512 HOH HOH . 
F 5 HOH A 25 625 534 HOH HOH . 
F 5 HOH A 26 626 508 HOH HOH . 
F 5 HOH A 27 627 520 HOH HOH . 
F 5 HOH A 28 628 535 HOH HOH . 
F 5 HOH A 29 629 510 HOH HOH . 
F 5 HOH A 30 630 523 HOH HOH . 
F 5 HOH A 31 631 532 HOH HOH . 
F 5 HOH A 32 632 522 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 8UY . . . D 3 28.587 56.065 3.986 1 58.17 ? N1 8UY 503 A 1 
HETATM 2 C C4 8UY . . . D 3 28.761 55.179 0.63 1 58.51 ? C4 8UY 503 A 1 
HETATM 3 C C5 8UY . . . D 3 28.563 55.182 -0.74 1 58.32 ? C5 8UY 503 A 1 
HETATM 4 C C6 8UY . . . D 3 27.758 56.185 -1.311 1 57.13 ? C6 8UY 503 A 1 
HETATM 5 C C7 8UY . . . D 3 27.157 57.159 -0.49 1 55.01 ? C7 8UY 503 A 1 
HETATM 6 C C8 8UY . . . D 3 27.36 57.153 0.874 1 56.64 ? C8 8UY 503 A 1 
HETATM 7 C C10 8UY . . . D 3 27.127 55.112 -3.506 1 60.67 ? C10 8UY 503 A 1 
HETATM 8 C C13 8UY . . . D 3 27.464 57.582 -4.759 1 59.55 ? C13 8UY 503 A 1 
HETATM 9 C C15 8UY . . . D 3 28.069 59.523 -3.976 1 58.87 ? C15 8UY 503 A 1 
HETATM 10 C C2 8UY . . . D 3 28.406 56.095 2.859 1 59.52 ? C2 8UY 503 A 1 
HETATM 11 C C3 8UY . . . D 3 28.167 56.153 1.446 1 55.96 ? C3 8UY 503 A 1 
HETATM 12 C C9 8UY . . . D 3 27.518 56.239 -2.777 1 60.09 ? C9 8UY 503 A 1 
HETATM 13 C C11 8UY . . . D 3 26.91 55.238 -4.891 1 61.06 ? C11 8UY 503 A 1 
HETATM 14 C C12 8UY . . . D 3 27.065 56.451 -5.515 1 61.33 ? C12 8UY 503 A 1 
HETATM 15 N N14 8UY . . . D 3 27.705 58.851 -5.065 1 59.8 ? N14 8UY 503 A 1 
HETATM 16 N N16 8UY . . . D 3 28.068 58.722 -2.949 1 58.51 ? N16 8UY 503 A 1 
HETATM 17 N N17 8UY . . . D 3 27.684 57.45 -3.416 1 57.67 ? N17 8UY 503 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           17 
#