data_5V2G
#
_model_server_result.job_id            jFK14JBCeZ27Ns6qhi2bGw 
_model_server_result.datetime_utc      '2024-11-13 03:56:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5v2g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":100}' 
#
_entry.id    5V2G 
#
_exptl.entry_id    5V2G 
_exptl.method      'SOLUTION NMR' 
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_entity.details                     ? 
_entity.formula_weight              356.88 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,3,5-tris(bromomethyl)benzene 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A N LYS 1 A LYS 1 1_555 C C SER 20 C SER 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 sing 
covale ? covale2 A SG CYS 11 A CYS 11 1_555 D C8 ZBR . A ZBR 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? 
covale ? covale3 A C SER 20 A SER 20 1_555 B N LYS 1 B LYS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 sing 
covale ? covale4 D C7 ZBR . A ZBR 100 1_555 B SG CYS 11 B CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? 
covale ? covale5 D C9 ZBR . A ZBR 100 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? 
covale ? covale6 B C SER 20 B SER 20 1_555 C N LYS 1 C LYS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 sing 
#
_chem_comp.formula           'C9 H9 Br3' 
_chem_comp.formula_weight    356.88 
_chem_comp.id                ZBR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,3,5-tris(bromomethyl)benzene 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5V2G 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          D 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           ZBR 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      100 
_pdbx_nonpoly_scheme.auth_seq_num     100 
_pdbx_nonpoly_scheme.pdb_mon_id       ZBR 
_pdbx_nonpoly_scheme.auth_mon_id      TBS 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 ZBR . . . D 2 -0.131 -0.785 -1.697 1 0 ? C1 ZBR 100 A 1 
HETATM 2 C C2 ZBR . . . D 2 -1.157 -0.34 -0.848 1 0 ? C2 ZBR 100 A 1 
HETATM 3 C C3 ZBR . . . D 2 -0.874 -0.066 0.516 1 0 ? C3 ZBR 100 A 1 
HETATM 4 C C4 ZBR . . . D 2 0.428 -0.24 1.024 1 0 ? C4 ZBR 100 A 1 
HETATM 5 C C5 ZBR . . . D 2 1.462 -0.692 0.165 1 0 ? C5 ZBR 100 A 1 
HETATM 6 C C6 ZBR . . . D 2 1.189 -0.963 -1.192 1 0 ? C6 ZBR 100 A 1 
HETATM 7 C C7 ZBR . . . D 2 -0.464 -1.064 -3.143 1 0 ? C7 ZBR 100 A 1 
HETATM 8 C C8 ZBR . . . D 2 -1.952 0.408 1.46 1 0 ? C8 ZBR 100 A 1 
HETATM 9 C C9 ZBR . . . D 2 2.863 -0.896 0.685 1 0 ? C9 ZBR 100 A 1 
HETATM 10 H H2 ZBR . . . D 2 -2.164 -0.215 -1.254 1 0 ? H2 ZBR 100 A 1 
HETATM 11 H H4 ZBR . . . D 2 0.622 -0.02 2.081 1 0 ? H4 ZBR 100 A 1 
HETATM 12 H H6 ZBR . . . D 2 2.001 -1.313 -1.841 1 0 ? H6 ZBR 100 A 1 
HETATM 13 H H7 ZBR . . . D 2 -1.288 -0.439 -3.442 1 0 ? H7 ZBR 100 A 1 
HETATM 14 H H7A ZBR . . . D 2 -0.75 -2.105 -3.248 1 0 ? H7A ZBR 100 A 1 
HETATM 15 H H8 ZBR . . . D 2 -1.505 0.978 2.262 1 0 ? H8 ZBR 100 A 1 
HETATM 16 H H8A ZBR . . . D 2 -2.458 -0.453 1.877 1 0 ? H8A ZBR 100 A 1 
HETATM 17 H H9 ZBR . . . D 2 3.563 -0.827 -0.134 1 0 ? H9 ZBR 100 A 1 
HETATM 18 H H9A ZBR . . . D 2 2.932 -1.878 1.132 1 0 ? H9A ZBR 100 A 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           4 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           4861 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           18 
#