data_5V2G # _model_server_result.job_id L9jDSHOhrPyt_qiV37lBTA _model_server_result.datetime_utc '2024-11-27 01:22:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5v2g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":100}' # _entry.id 5V2G # _exptl.entry_id 5V2G _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 356.88 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,3,5-tris(bromomethyl)benzene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N LYS 1 A LYS 1 1_555 C C SER 20 C SER 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 sing covale ? covale2 A SG CYS 11 A CYS 11 1_555 D C8 ZBR . A ZBR 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? covale ? covale3 A C SER 20 A SER 20 1_555 B N LYS 1 B LYS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 sing covale ? covale4 D C7 ZBR . A ZBR 100 1_555 B SG CYS 11 B CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? covale ? covale5 D C9 ZBR . A ZBR 100 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? covale ? covale6 B C SER 20 B SER 20 1_555 C N LYS 1 C LYS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 sing # _chem_comp.formula 'C9 H9 Br3' _chem_comp.formula_weight 356.88 _chem_comp.id ZBR _chem_comp.mon_nstd_flag . _chem_comp.name 1,3,5-tris(bromomethyl)benzene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ZBR doub 213 n y C1 C6 ZBR sing 214 n y C1 C7 ZBR sing 215 n n C2 C3 ZBR sing 216 n y C3 C4 ZBR doub 217 n y C3 C8 ZBR sing 218 n n C4 C5 ZBR sing 219 n y C5 C6 ZBR doub 220 n y C5 C9 ZBR sing 221 n n C7 BR2 ZBR sing 222 n n C8 BR1 ZBR sing 223 n n C9 BR3 ZBR sing 224 n n C2 H2 ZBR sing 225 n n C4 H4 ZBR sing 226 n n C6 H6 ZBR sing 227 n n C7 H7 ZBR sing 228 n n C7 H7A ZBR sing 229 n n C8 H8 ZBR sing 230 n n C8 H8A ZBR sing 231 n n C9 H9 ZBR sing 232 n n C9 H9A ZBR sing 233 n n # _atom_sites.entry_id 5V2G _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ZBR _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 100 _pdbx_nonpoly_scheme.auth_seq_num 100 _pdbx_nonpoly_scheme.pdb_mon_id ZBR _pdbx_nonpoly_scheme.auth_mon_id TBS _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ZBR . . . D 2 -0.131 -0.785 -1.697 1 0 ? C1 ZBR 100 A 1 HETATM 2 C C2 ZBR . . . D 2 -1.157 -0.34 -0.848 1 0 ? C2 ZBR 100 A 1 HETATM 3 C C3 ZBR . . . D 2 -0.874 -0.066 0.516 1 0 ? C3 ZBR 100 A 1 HETATM 4 C C4 ZBR . . . D 2 0.428 -0.24 1.024 1 0 ? C4 ZBR 100 A 1 HETATM 5 C C5 ZBR . . . D 2 1.462 -0.692 0.165 1 0 ? C5 ZBR 100 A 1 HETATM 6 C C6 ZBR . . . D 2 1.189 -0.963 -1.192 1 0 ? C6 ZBR 100 A 1 HETATM 7 C C7 ZBR . . . D 2 -0.464 -1.064 -3.143 1 0 ? C7 ZBR 100 A 1 HETATM 8 C C8 ZBR . . . D 2 -1.952 0.408 1.46 1 0 ? C8 ZBR 100 A 1 HETATM 9 C C9 ZBR . . . D 2 2.863 -0.896 0.685 1 0 ? C9 ZBR 100 A 1 HETATM 10 H H2 ZBR . . . D 2 -2.164 -0.215 -1.254 1 0 ? H2 ZBR 100 A 1 HETATM 11 H H4 ZBR . . . D 2 0.622 -0.02 2.081 1 0 ? H4 ZBR 100 A 1 HETATM 12 H H6 ZBR . . . D 2 2.001 -1.313 -1.841 1 0 ? H6 ZBR 100 A 1 HETATM 13 H H7 ZBR . . . D 2 -1.288 -0.439 -3.442 1 0 ? H7 ZBR 100 A 1 HETATM 14 H H7A ZBR . . . D 2 -0.75 -2.105 -3.248 1 0 ? H7A ZBR 100 A 1 HETATM 15 H H8 ZBR . . . D 2 -1.505 0.978 2.262 1 0 ? H8 ZBR 100 A 1 HETATM 16 H H8A ZBR . . . D 2 -2.458 -0.453 1.877 1 0 ? H8A ZBR 100 A 1 HETATM 17 H H9 ZBR . . . D 2 3.563 -0.827 -0.134 1 0 ? H9 ZBR 100 A 1 HETATM 18 H H9A ZBR . . . D 2 2.932 -1.878 1.132 1 0 ? H9A ZBR 100 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 5650 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #