data_5V4K # _model_server_result.job_id Hx6evIpnRwzyJA-jDJPauw _model_server_result.datetime_utc '2024-11-21 23:40:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5v4k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1202}' # _entry.id 5V4K # _exptl.entry_id 5V4K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5V4K _cell.length_a 69.57 _cell.length_b 69.57 _cell.length_c 119.62 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V4K _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 5V4K _atom_sites.fract_transf_matrix[1][1] 0.014374 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014374 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00836 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 1201 2 GOL GOL . D 3 SO4 A 1 1202 2 SO4 SO4 . E 2 GOL B 1 1201 3 GOL GOL . F 3 SO4 B 1 1202 1 SO4 SO4 . G 4 HOH A 1 1301 135 HOH HOH . G 4 HOH A 2 1302 77 HOH HOH . G 4 HOH A 3 1303 2 HOH HOH . G 4 HOH A 4 1304 63 HOH HOH . G 4 HOH A 5 1305 100 HOH HOH . G 4 HOH A 6 1306 93 HOH HOH . G 4 HOH A 7 1307 81 HOH HOH . G 4 HOH A 8 1308 98 HOH HOH . G 4 HOH A 9 1309 46 HOH HOH . G 4 HOH A 10 1310 1 HOH HOH . G 4 HOH A 11 1311 83 HOH HOH . G 4 HOH A 12 1312 57 HOH HOH . G 4 HOH A 13 1313 102 HOH HOH . G 4 HOH A 14 1314 61 HOH HOH . G 4 HOH A 15 1315 64 HOH HOH . G 4 HOH A 16 1316 47 HOH HOH . G 4 HOH A 17 1317 53 HOH HOH . G 4 HOH A 18 1318 73 HOH HOH . G 4 HOH A 19 1319 3 HOH HOH . G 4 HOH A 20 1320 107 HOH HOH . G 4 HOH A 21 1321 43 HOH HOH . G 4 HOH A 22 1322 113 HOH HOH . G 4 HOH A 23 1323 49 HOH HOH . G 4 HOH A 24 1324 116 HOH HOH . G 4 HOH A 25 1325 120 HOH HOH . G 4 HOH A 26 1326 9 HOH HOH . G 4 HOH A 27 1327 67 HOH HOH . G 4 HOH A 28 1328 97 HOH HOH . G 4 HOH A 29 1329 32 HOH HOH . G 4 HOH A 30 1330 5 HOH HOH . G 4 HOH A 31 1331 103 HOH HOH . G 4 HOH A 32 1332 4 HOH HOH . G 4 HOH A 33 1333 106 HOH HOH . G 4 HOH A 34 1334 13 HOH HOH . G 4 HOH A 35 1335 109 HOH HOH . G 4 HOH A 36 1336 65 HOH HOH . G 4 HOH A 37 1337 12 HOH HOH . G 4 HOH A 38 1338 115 HOH HOH . G 4 HOH A 39 1339 101 HOH HOH . G 4 HOH A 40 1340 126 HOH HOH . G 4 HOH A 41 1341 51 HOH HOH . G 4 HOH A 42 1342 22 HOH HOH . G 4 HOH A 43 1343 40 HOH HOH . G 4 HOH A 44 1344 27 HOH HOH . G 4 HOH A 45 1345 44 HOH HOH . G 4 HOH A 46 1346 54 HOH HOH . G 4 HOH A 47 1347 85 HOH HOH . G 4 HOH A 48 1348 42 HOH HOH . G 4 HOH A 49 1349 60 HOH HOH . G 4 HOH A 50 1350 82 HOH HOH . G 4 HOH A 51 1351 31 HOH HOH . G 4 HOH A 52 1352 26 HOH HOH . G 4 HOH A 53 1353 139 HOH HOH . G 4 HOH A 54 1354 16 HOH HOH . G 4 HOH A 55 1355 20 HOH HOH . G 4 HOH A 56 1356 41 HOH HOH . G 4 HOH A 57 1357 91 HOH HOH . G 4 HOH A 58 1358 52 HOH HOH . G 4 HOH A 59 1359 90 HOH HOH . G 4 HOH A 60 1360 117 HOH HOH . G 4 HOH A 61 1361 108 HOH HOH . G 4 HOH A 62 1362 138 HOH HOH . G 4 HOH A 63 1363 110 HOH HOH . G 4 HOH A 64 1364 55 HOH HOH . G 4 HOH A 65 1365 75 HOH HOH . G 4 HOH A 66 1366 45 HOH HOH . G 4 HOH A 67 1367 125 HOH HOH . G 4 HOH A 68 1368 127 HOH HOH . G 4 HOH A 69 1369 129 HOH HOH . G 4 HOH A 70 1370 59 HOH HOH . G 4 HOH A 71 1371 74 HOH HOH . G 4 HOH A 72 1372 133 HOH HOH . G 4 HOH A 73 1373 50 HOH HOH . H 4 HOH B 1 1301 92 HOH HOH . H 4 HOH B 2 1302 48 HOH HOH . H 4 HOH B 3 1303 62 HOH HOH . H 4 HOH B 4 1304 35 HOH HOH . H 4 HOH B 5 1305 104 HOH HOH . H 4 HOH B 6 1306 84 HOH HOH . H 4 HOH B 7 1307 7 HOH HOH . H 4 HOH B 8 1308 130 HOH HOH . H 4 HOH B 9 1309 58 HOH HOH . H 4 HOH B 10 1310 86 HOH HOH . H 4 HOH B 11 1311 87 HOH HOH . H 4 HOH B 12 1312 37 HOH HOH . H 4 HOH B 13 1313 72 HOH HOH . H 4 HOH B 14 1314 10 HOH HOH . H 4 HOH B 15 1315 119 HOH HOH . H 4 HOH B 16 1316 19 HOH HOH . H 4 HOH B 17 1317 112 HOH HOH . H 4 HOH B 18 1318 24 HOH HOH . H 4 HOH B 19 1319 33 HOH HOH . H 4 HOH B 20 1320 39 HOH HOH . H 4 HOH B 21 1321 23 HOH HOH . H 4 HOH B 22 1322 8 HOH HOH . H 4 HOH B 23 1323 15 HOH HOH . H 4 HOH B 24 1324 21 HOH HOH . H 4 HOH B 25 1325 30 HOH HOH . H 4 HOH B 26 1326 36 HOH HOH . H 4 HOH B 27 1327 6 HOH HOH . H 4 HOH B 28 1328 70 HOH HOH . H 4 HOH B 29 1329 78 HOH HOH . H 4 HOH B 30 1330 14 HOH HOH . H 4 HOH B 31 1331 34 HOH HOH . H 4 HOH B 32 1332 68 HOH HOH . H 4 HOH B 33 1333 25 HOH HOH . H 4 HOH B 34 1334 88 HOH HOH . H 4 HOH B 35 1335 80 HOH HOH . H 4 HOH B 36 1336 66 HOH HOH . H 4 HOH B 37 1337 18 HOH HOH . H 4 HOH B 38 1338 28 HOH HOH . H 4 HOH B 39 1339 99 HOH HOH . H 4 HOH B 40 1340 29 HOH HOH . H 4 HOH B 41 1341 96 HOH HOH . H 4 HOH B 42 1342 17 HOH HOH . H 4 HOH B 43 1343 136 HOH HOH . H 4 HOH B 44 1344 79 HOH HOH . H 4 HOH B 45 1345 111 HOH HOH . H 4 HOH B 46 1346 114 HOH HOH . H 4 HOH B 47 1347 76 HOH HOH . H 4 HOH B 48 1348 69 HOH HOH . H 4 HOH B 49 1349 118 HOH HOH . H 4 HOH B 50 1350 142 HOH HOH . H 4 HOH B 51 1351 122 HOH HOH . H 4 HOH B 52 1352 123 HOH HOH . H 4 HOH B 53 1353 140 HOH HOH . H 4 HOH B 54 1354 121 HOH HOH . H 4 HOH B 55 1355 95 HOH HOH . H 4 HOH B 56 1356 124 HOH HOH . H 4 HOH B 57 1357 134 HOH HOH . H 4 HOH B 58 1358 38 HOH HOH . H 4 HOH B 59 1359 11 HOH HOH . H 4 HOH B 60 1360 89 HOH HOH . H 4 HOH B 61 1361 56 HOH HOH . H 4 HOH B 62 1362 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 -18.596 19.926 -13.895 1 78.36 ? S SO4 1202 A 1 HETATM 2 O O1 SO4 . . . D 3 -17.757 19.862 -15.092 1 73.13 ? O1 SO4 1202 A 1 HETATM 3 O O2 SO4 . . . D 3 -19.926 20.425 -14.235 1 76.85 ? O2 SO4 1202 A 1 HETATM 4 O O3 SO4 . . . D 3 -18.001 20.822 -12.904 1 84.23 ? O3 SO4 1202 A 1 HETATM 5 O O4 SO4 . . . D 3 -18.711 18.591 -13.318 1 78.88 ? O4 SO4 1202 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #