data_5V61 # _model_server_result.job_id gWp1tgqzxOVpFr5utKZVcQ _model_server_result.datetime_utc '2024-11-25 11:28:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5v61 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":801}' # _entry.id 5V61 # _exptl.entry_id 5V61 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 327.343 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(2-PHENYLPYRAZOLO[1,5-A]PYRIDIN-3-YL)-1H-PYRAZOLO[3,4-C]PYRIDAZIN-3-AMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5V61 _cell.length_a 42.217 _cell.length_b 78.328 _cell.length_c 152.187 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V61 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 180 A LEU 184 1_555 A N TPO 181 A TPO 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C TPO 181 A TPO 185 1_555 A N GLU 182 A GLU 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C GLU 182 A GLU 186 1_555 A N PTR 183 A PTR 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C PTR 183 A PTR 187 1_555 A N VAL 184 A VAL 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 B N THR 1 I THR 711 1_555 G C15 90A . I 90A 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale6 F N29 FRZ . I FRZ 801 1_555 G C6 90A . I 90A 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? # _chem_comp.formula 'C18 H13 N7' _chem_comp.formula_weight 327.343 _chem_comp.id FRZ _chem_comp.mon_nstd_flag . _chem_comp.name 5-(2-PHENYLPYRAZOLO[1,5-A]PYRIDIN-3-YL)-1H-PYRAZOLO[3,4-C]PYRIDAZIN-3-AMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms FR180204 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FRZ doub 128 n y C1 C6 FRZ sing 129 n y C1 H1 FRZ sing 130 n n C2 N3 FRZ sing 131 n y C2 H2 FRZ sing 132 n n N3 C4 FRZ sing 133 n y N3 N7 FRZ sing 134 n y C4 C5 FRZ sing 135 n y C4 C9 FRZ doub 136 n y C5 C6 FRZ doub 137 n y C5 H5 FRZ sing 138 n n C6 H6 FRZ sing 139 n n N7 C8 FRZ doub 140 n y C8 C9 FRZ sing 141 n y C8 C11 FRZ sing 142 n y C9 C10 FRZ sing 143 n y C10 C22 FRZ doub 144 n y C10 N26 FRZ sing 145 n y C11 C12 FRZ doub 146 n y C11 C16 FRZ sing 147 n y C12 C13 FRZ sing 148 n y C12 H12 FRZ sing 149 n n C13 C14 FRZ doub 150 n y C13 H13 FRZ sing 151 n n C14 C15 FRZ sing 152 n y C14 H14 FRZ sing 153 n n C15 C16 FRZ doub 154 n y C15 H15 FRZ sing 155 n n C16 H16 FRZ sing 156 n n C22 C23 FRZ sing 157 n y C22 H22 FRZ sing 158 n n C23 C24 FRZ doub 159 n y C23 C27 FRZ sing 160 n y C24 N25 FRZ sing 161 n y C24 N29 FRZ sing 162 n y N25 N26 FRZ doub 163 n y C27 N28 FRZ doub 164 n y C27 N30 FRZ sing 165 n n N28 N29 FRZ sing 166 n y N29 H29 FRZ sing 167 n n N30 H301 FRZ sing 168 n n N30 H302 FRZ sing 169 n n # _atom_sites.entry_id 5V61 _atom_sites.fract_transf_matrix[1][1] 0.023687 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012767 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006571 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 401 401 GOL GOL . D 3 GOL A 1 402 402 GOL GOL . E 3 GOL A 1 403 403 GOL GOL . F 4 FRZ I 1 801 709 FRZ FRZ . G 5 90A I 1 802 710 90A 90A . H 6 HOH A 1 501 501 HOH HOH . H 6 HOH A 2 502 502 HOH HOH . H 6 HOH A 3 503 503 HOH HOH . H 6 HOH A 4 504 504 HOH HOH . H 6 HOH A 5 505 505 HOH HOH . H 6 HOH A 6 506 506 HOH HOH . H 6 HOH A 7 507 507 HOH HOH . H 6 HOH A 8 508 508 HOH HOH . H 6 HOH A 9 509 509 HOH HOH . H 6 HOH A 10 510 510 HOH HOH . H 6 HOH A 11 511 511 HOH HOH . H 6 HOH A 12 512 512 HOH HOH . H 6 HOH A 13 513 513 HOH HOH . H 6 HOH A 14 514 514 HOH HOH . H 6 HOH A 15 515 515 HOH HOH . H 6 HOH A 16 516 516 HOH HOH . H 6 HOH A 17 517 517 HOH HOH . H 6 HOH A 18 518 518 HOH HOH . H 6 HOH A 19 519 519 HOH HOH . H 6 HOH A 20 520 520 HOH HOH . H 6 HOH A 21 521 521 HOH HOH . H 6 HOH A 22 522 522 HOH HOH . H 6 HOH A 23 523 523 HOH HOH . H 6 HOH A 24 524 524 HOH HOH . H 6 HOH A 25 525 525 HOH HOH . H 6 HOH A 26 526 526 HOH HOH . H 6 HOH A 27 527 527 HOH HOH . H 6 HOH A 28 528 528 HOH HOH . H 6 HOH A 29 529 529 HOH HOH . H 6 HOH A 30 530 530 HOH HOH . H 6 HOH A 31 531 531 HOH HOH . H 6 HOH A 32 532 532 HOH HOH . H 6 HOH A 33 533 533 HOH HOH . H 6 HOH A 34 534 534 HOH HOH . H 6 HOH A 35 535 535 HOH HOH . H 6 HOH A 36 536 536 HOH HOH . H 6 HOH A 37 537 537 HOH HOH . H 6 HOH A 38 538 538 HOH HOH . H 6 HOH A 39 539 539 HOH HOH . H 6 HOH A 40 540 540 HOH HOH . H 6 HOH A 41 541 541 HOH HOH . H 6 HOH A 42 542 542 HOH HOH . H 6 HOH A 43 543 543 HOH HOH . H 6 HOH A 44 544 544 HOH HOH . H 6 HOH A 45 545 545 HOH HOH . H 6 HOH A 46 546 546 HOH HOH . H 6 HOH A 47 547 547 HOH HOH . H 6 HOH A 48 548 548 HOH HOH . H 6 HOH A 49 549 549 HOH HOH . H 6 HOH A 50 550 550 HOH HOH . H 6 HOH A 51 551 551 HOH HOH . H 6 HOH A 52 552 552 HOH HOH . H 6 HOH A 53 553 553 HOH HOH . H 6 HOH A 54 554 554 HOH HOH . H 6 HOH A 55 555 555 HOH HOH . H 6 HOH A 56 556 556 HOH HOH . H 6 HOH A 57 557 557 HOH HOH . H 6 HOH A 58 558 558 HOH HOH . H 6 HOH A 59 559 559 HOH HOH . H 6 HOH A 60 560 560 HOH HOH . H 6 HOH A 61 561 561 HOH HOH . H 6 HOH A 62 562 562 HOH HOH . H 6 HOH A 63 563 563 HOH HOH . H 6 HOH A 64 564 564 HOH HOH . H 6 HOH A 65 565 565 HOH HOH . H 6 HOH A 66 566 566 HOH HOH . H 6 HOH A 67 567 567 HOH HOH . H 6 HOH A 68 568 568 HOH HOH . H 6 HOH A 69 569 569 HOH HOH . H 6 HOH A 70 570 570 HOH HOH . H 6 HOH A 71 571 571 HOH HOH . H 6 HOH A 72 572 572 HOH HOH . H 6 HOH A 73 573 573 HOH HOH . H 6 HOH A 74 574 574 HOH HOH . H 6 HOH A 75 575 575 HOH HOH . H 6 HOH A 76 576 576 HOH HOH . H 6 HOH A 77 577 577 HOH HOH . H 6 HOH A 78 578 578 HOH HOH . H 6 HOH A 79 579 579 HOH HOH . H 6 HOH A 80 580 580 HOH HOH . H 6 HOH A 81 581 581 HOH HOH . H 6 HOH A 82 582 582 HOH HOH . H 6 HOH A 83 583 583 HOH HOH . H 6 HOH A 84 584 584 HOH HOH . H 6 HOH A 85 585 585 HOH HOH . H 6 HOH A 86 586 586 HOH HOH . H 6 HOH A 87 587 587 HOH HOH . H 6 HOH A 88 588 588 HOH HOH . H 6 HOH A 89 589 589 HOH HOH . H 6 HOH A 90 590 590 HOH HOH . H 6 HOH A 91 591 591 HOH HOH . I 6 HOH I 1 901 801 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FRZ . . . F 4 -12.937 16.297 -17.896 1 67.6 ? C1 FRZ 801 I 1 HETATM 2 C C2 FRZ . . . F 4 -12.101 15.635 -16.967 1 65.02 ? C2 FRZ 801 I 1 HETATM 3 N N3 FRZ . . . F 4 -11.932 16.184 -15.75 1 61.51 ? N3 FRZ 801 I 1 HETATM 4 C C4 FRZ . . . F 4 -12.518 17.339 -15.437 1 60.69 ? C4 FRZ 801 I 1 HETATM 5 C C5 FRZ . . . F 4 -13.341 18.059 -16.29 1 63.33 ? C5 FRZ 801 I 1 HETATM 6 C C6 FRZ . . . F 4 -13.57 17.51 -17.565 1 66.88 ? C6 FRZ 801 I 1 HETATM 7 N N7 FRZ . . . F 4 -11.111 15.633 -14.781 1 59.38 ? N7 FRZ 801 I 1 HETATM 8 C C8 FRZ . . . F 4 -11.181 16.489 -13.733 1 56.97 ? C8 FRZ 801 I 1 HETATM 9 C C9 FRZ . . . F 4 -12.085 17.616 -14.072 1 57.98 ? C9 FRZ 801 I 1 HETATM 10 C C10 FRZ . . . F 4 -12.495 18.78 -13.273 1 56.5 ? C10 FRZ 801 I 1 HETATM 11 C C11 FRZ . . . F 4 -10.488 16.344 -12.455 1 54.87 ? C11 FRZ 801 I 1 HETATM 12 C C12 FRZ . . . F 4 -11.071 16.686 -11.219 1 55.89 ? C12 FRZ 801 I 1 HETATM 13 C C13 FRZ . . . F 4 -10.326 16.524 -10.029 1 54.69 ? C13 FRZ 801 I 1 HETATM 14 C C14 FRZ . . . F 4 -9.035 16.056 -10.078 1 52.06 ? C14 FRZ 801 I 1 HETATM 15 C C15 FRZ . . . F 4 -8.463 15.757 -11.32 1 51.22 ? C15 FRZ 801 I 1 HETATM 16 C C16 FRZ . . . F 4 -9.165 15.891 -12.505 1 52.24 ? C16 FRZ 801 I 1 HETATM 17 C C22 FRZ . . . F 4 -11.588 19.554 -12.619 1 53.22 ? C22 FRZ 801 I 1 HETATM 18 C C23 FRZ . . . F 4 -12.066 20.615 -11.9 1 53.6 ? C23 FRZ 801 I 1 HETATM 19 C C24 FRZ . . . F 4 -13.491 20.895 -11.82 1 58.21 ? C24 FRZ 801 I 1 HETATM 20 N N25 FRZ . . . F 4 -14.359 20.085 -12.45 1 61.46 ? N25 FRZ 801 I 1 HETATM 21 N N26 FRZ . . . F 4 -13.801 19.005 -13.159 1 60.42 ? N26 FRZ 801 I 1 HETATM 22 C C27 FRZ . . . F 4 -11.501 21.696 -11.115 1 51.58 ? C27 FRZ 801 I 1 HETATM 23 N N28 FRZ . . . F 4 -12.392 22.52 -10.615 1 54.33 ? N28 FRZ 801 I 1 HETATM 24 N N29 FRZ . . . F 4 -13.587 21.995 -11.092 1 58.9 ? N29 FRZ 801 I 1 HETATM 25 N N30 FRZ . . . F 4 -10.216 21.847 -10.877 1 48.87 ? N30 FRZ 801 I 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #