data_5V67
#
_model_server_result.job_id            gvi_E-u_Ko-fKvMmugF8Tw 
_model_server_result.datetime_utc      '2024-11-24 05:00:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5v67 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    5V67 
#
_exptl.entry_id    5V67 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5V67 
_cell.length_a            38.24 
_cell.length_b            42.21 
_cell.length_c            93.44 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5V67 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 92 n n 
C1 C2 EDO sing 93 n n 
C1 H11 EDO sing 94 n n 
C1 H12 EDO sing 95 n n 
O1 HO1 EDO sing 96 n n 
C2 O2 EDO sing 97 n n 
C2 H21 EDO sing 98 n n 
C2 H22 EDO sing 99 n n 
O2 HO2 EDO sing 100 n n 
#
_atom_sites.entry_id                     5V67 
_atom_sites.fract_transf_matrix[1][1]    0.026151 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023691 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010702 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 IBI A 1 201 1 IBI IBI . 
C 3 EDO A 1 202 1 EDO EDO . 
D 4 DMS A 1 203 1 DMS DMS . 
E 4 DMS A 1 204 2 DMS DMS . 
F 5 HOH A 1 301 29 HOH HOH . 
F 5 HOH A 2 302 72 HOH HOH . 
F 5 HOH A 3 303 15 HOH HOH . 
F 5 HOH A 4 304 113 HOH HOH . 
F 5 HOH A 5 305 97 HOH HOH . 
F 5 HOH A 6 306 31 HOH HOH . 
F 5 HOH A 7 307 61 HOH HOH . 
F 5 HOH A 8 308 87 HOH HOH . 
F 5 HOH A 9 309 99 HOH HOH . 
F 5 HOH A 10 310 42 HOH HOH . 
F 5 HOH A 11 311 43 HOH HOH . 
F 5 HOH A 12 312 26 HOH HOH . 
F 5 HOH A 13 313 2 HOH HOH . 
F 5 HOH A 14 314 36 HOH HOH . 
F 5 HOH A 15 315 17 HOH HOH . 
F 5 HOH A 16 316 54 HOH HOH . 
F 5 HOH A 17 317 1 HOH HOH . 
F 5 HOH A 18 318 73 HOH HOH . 
F 5 HOH A 19 319 68 HOH HOH . 
F 5 HOH A 20 320 7 HOH HOH . 
F 5 HOH A 21 321 34 HOH HOH . 
F 5 HOH A 22 322 49 HOH HOH . 
F 5 HOH A 23 323 71 HOH HOH . 
F 5 HOH A 24 324 27 HOH HOH . 
F 5 HOH A 25 325 112 HOH HOH . 
F 5 HOH A 26 326 18 HOH HOH . 
F 5 HOH A 27 327 3 HOH HOH . 
F 5 HOH A 28 328 57 HOH HOH . 
F 5 HOH A 29 329 8 HOH HOH . 
F 5 HOH A 30 330 23 HOH HOH . 
F 5 HOH A 31 331 5 HOH HOH . 
F 5 HOH A 32 332 22 HOH HOH . 
F 5 HOH A 33 333 79 HOH HOH . 
F 5 HOH A 34 334 38 HOH HOH . 
F 5 HOH A 35 335 98 HOH HOH . 
F 5 HOH A 36 336 14 HOH HOH . 
F 5 HOH A 37 337 39 HOH HOH . 
F 5 HOH A 38 338 74 HOH HOH . 
F 5 HOH A 39 339 63 HOH HOH . 
F 5 HOH A 40 340 25 HOH HOH . 
F 5 HOH A 41 341 52 HOH HOH . 
F 5 HOH A 42 342 84 HOH HOH . 
F 5 HOH A 43 343 47 HOH HOH . 
F 5 HOH A 44 344 94 HOH HOH . 
F 5 HOH A 45 345 91 HOH HOH . 
F 5 HOH A 46 346 12 HOH HOH . 
F 5 HOH A 47 347 58 HOH HOH . 
F 5 HOH A 48 348 30 HOH HOH . 
F 5 HOH A 49 349 86 HOH HOH . 
F 5 HOH A 50 350 116 HOH HOH . 
F 5 HOH A 51 351 10 HOH HOH . 
F 5 HOH A 52 352 83 HOH HOH . 
F 5 HOH A 53 353 101 HOH HOH . 
F 5 HOH A 54 354 67 HOH HOH . 
F 5 HOH A 55 355 46 HOH HOH . 
F 5 HOH A 56 356 37 HOH HOH . 
F 5 HOH A 57 357 28 HOH HOH . 
F 5 HOH A 58 358 96 HOH HOH . 
F 5 HOH A 59 359 62 HOH HOH . 
F 5 HOH A 60 360 53 HOH HOH . 
F 5 HOH A 61 361 75 HOH HOH . 
F 5 HOH A 62 362 21 HOH HOH . 
F 5 HOH A 63 363 107 HOH HOH . 
F 5 HOH A 64 364 6 HOH HOH . 
F 5 HOH A 65 365 89 HOH HOH . 
F 5 HOH A 66 366 78 HOH HOH . 
F 5 HOH A 67 367 20 HOH HOH . 
F 5 HOH A 68 368 13 HOH HOH . 
F 5 HOH A 69 369 95 HOH HOH . 
F 5 HOH A 70 370 11 HOH HOH . 
F 5 HOH A 71 371 93 HOH HOH . 
F 5 HOH A 72 372 19 HOH HOH . 
F 5 HOH A 73 373 66 HOH HOH . 
F 5 HOH A 74 374 60 HOH HOH . 
F 5 HOH A 75 375 33 HOH HOH . 
F 5 HOH A 76 376 24 HOH HOH . 
F 5 HOH A 77 377 104 HOH HOH . 
F 5 HOH A 78 378 51 HOH HOH . 
F 5 HOH A 79 379 4 HOH HOH . 
F 5 HOH A 80 380 45 HOH HOH . 
F 5 HOH A 81 381 64 HOH HOH . 
F 5 HOH A 82 382 40 HOH HOH . 
F 5 HOH A 83 383 56 HOH HOH . 
F 5 HOH A 84 384 102 HOH HOH . 
F 5 HOH A 85 385 111 HOH HOH . 
F 5 HOH A 86 386 80 HOH HOH . 
F 5 HOH A 87 387 59 HOH HOH . 
F 5 HOH A 88 388 48 HOH HOH . 
F 5 HOH A 89 389 70 HOH HOH . 
F 5 HOH A 90 390 115 HOH HOH . 
F 5 HOH A 91 391 88 HOH HOH . 
F 5 HOH A 92 392 117 HOH HOH . 
F 5 HOH A 93 393 77 HOH HOH . 
F 5 HOH A 94 394 82 HOH HOH . 
F 5 HOH A 95 395 32 HOH HOH . 
F 5 HOH A 96 396 44 HOH HOH . 
F 5 HOH A 97 397 16 HOH HOH . 
F 5 HOH A 98 398 50 HOH HOH . 
F 5 HOH A 99 399 9 HOH HOH . 
F 5 HOH A 100 400 108 HOH HOH . 
F 5 HOH A 101 401 35 HOH HOH . 
F 5 HOH A 102 402 55 HOH HOH . 
F 5 HOH A 103 403 110 HOH HOH . 
F 5 HOH A 104 404 100 HOH HOH . 
F 5 HOH A 105 405 114 HOH HOH . 
F 5 HOH A 106 406 105 HOH HOH . 
F 5 HOH A 107 407 85 HOH HOH . 
F 5 HOH A 108 408 81 HOH HOH . 
F 5 HOH A 109 409 103 HOH HOH . 
F 5 HOH A 110 410 65 HOH HOH . 
F 5 HOH A 111 411 76 HOH HOH . 
F 5 HOH A 112 412 41 HOH HOH . 
F 5 HOH A 113 413 92 HOH HOH . 
F 5 HOH A 114 414 69 HOH HOH . 
F 5 HOH A 115 415 90 HOH HOH . 
F 5 HOH A 116 416 106 HOH HOH . 
F 5 HOH A 117 417 109 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 -3.676 11.475 8.378 1 20.02 ? C1 EDO 202 A 1 
HETATM 2 O O1 EDO . . . C 3 -4.248 12.481 9.229 1 20.23 ? O1 EDO 202 A 1 
HETATM 3 C C2 EDO . . . C 3 -2.752 10.571 9.185 1 17.76 ? C2 EDO 202 A 1 
HETATM 4 O O2 EDO . . . C 3 -1.644 11.311 9.702 1 14.87 ? O2 EDO 202 A 1 
HETATM 5 H H1 EDO . . . C 3 -4.472 10.879 7.928 1 24.02 ? H1 EDO 202 A 1 
HETATM 6 H H2 EDO . . . C 3 -3.113 11.952 7.574 1 24.02 ? H2 EDO 202 A 1 
HETATM 7 H H3 EDO . . . C 3 -3.309 10.122 10.01 1 21.32 ? H3 EDO 202 A 1 
HETATM 8 H H4 EDO . . . C 3 -1.07 10.721 10.21 1 17.84 ? H4 EDO 202 A 1 
HETATM 9 H H5 EDO . . . C 3 -4.832 13.049 8.708 1 24.28 ? H5 EDO 202 A 1 
HETATM 10 H H6 EDO . . . C 3 -2.386 9.763 8.548 1 21.32 ? H6 EDO 202 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           10 
#