data_5V6S
#
_model_server_result.job_id            EfX6wHWkPkM7Rh5DiJYkjQ 
_model_server_result.datetime_utc      '2024-10-18 16:24:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5v6s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    5V6S 
#
_exptl.entry_id    5V6S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5V6S 
_cell.length_a            41.07 
_cell.length_b            41.07 
_cell.length_c            349.446 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5V6S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 13 A CYS 12 1_555 D C27 8YD . A 8YD 203 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.828 ? 
covale ? covale2 A SG CYS 13 A CYS 12 1_555 D C27 8YD . A 8YD 203 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.772 ? 
metalc ? metalc1 A OG SER 18 A SER 17 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? 
metalc ? metalc2 B O3B GDP . A GDP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc3 C MG MG . A MG 202 1_555 E O HOH . A HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc4 C MG MG . A MG 202 1_555 E O HOH . A HOH 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc5 C MG MG . A MG 202 1_555 E O HOH . A HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? 
metalc ? metalc6 C MG MG . A MG 202 1_555 E O HOH . A HOH 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     5V6S 
_atom_sites.fract_transf_matrix[1][1]    0.024349 
_atom_sites.fract_transf_matrix[1][2]    0.014058 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.028115 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002862 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GDP A 1 201 1 GDP GDP . 
C 3 MG A 1 202 1 MG MG . 
D 4 8YD A 1 203 1 8YD LIG . 
E 5 HOH A 1 301 45 HOH HOH . 
E 5 HOH A 2 302 32 HOH HOH . 
E 5 HOH A 3 303 56 HOH HOH . 
E 5 HOH A 4 304 55 HOH HOH . 
E 5 HOH A 5 305 6 HOH HOH . 
E 5 HOH A 6 306 8 HOH HOH . 
E 5 HOH A 7 307 31 HOH HOH . 
E 5 HOH A 8 308 2 HOH HOH . 
E 5 HOH A 9 309 5 HOH HOH . 
E 5 HOH A 10 310 36 HOH HOH . 
E 5 HOH A 11 311 76 HOH HOH . 
E 5 HOH A 12 312 19 HOH HOH . 
E 5 HOH A 13 313 21 HOH HOH . 
E 5 HOH A 14 314 28 HOH HOH . 
E 5 HOH A 15 315 37 HOH HOH . 
E 5 HOH A 16 316 4 HOH HOH . 
E 5 HOH A 17 317 43 HOH HOH . 
E 5 HOH A 18 318 65 HOH HOH . 
E 5 HOH A 19 319 29 HOH HOH . 
E 5 HOH A 20 320 34 HOH HOH . 
E 5 HOH A 21 321 7 HOH HOH . 
E 5 HOH A 22 322 50 HOH HOH . 
E 5 HOH A 23 323 26 HOH HOH . 
E 5 HOH A 24 324 9 HOH HOH . 
E 5 HOH A 25 325 12 HOH HOH . 
E 5 HOH A 26 326 13 HOH HOH . 
E 5 HOH A 27 327 27 HOH HOH . 
E 5 HOH A 28 328 3 HOH HOH . 
E 5 HOH A 29 329 16 HOH HOH . 
E 5 HOH A 30 330 38 HOH HOH . 
E 5 HOH A 31 331 22 HOH HOH . 
E 5 HOH A 32 332 54 HOH HOH . 
E 5 HOH A 33 333 42 HOH HOH . 
E 5 HOH A 34 334 61 HOH HOH . 
E 5 HOH A 35 335 58 HOH HOH . 
E 5 HOH A 36 336 15 HOH HOH . 
E 5 HOH A 37 337 48 HOH HOH . 
E 5 HOH A 38 338 62 HOH HOH . 
E 5 HOH A 39 339 10 HOH HOH . 
E 5 HOH A 40 340 78 HOH HOH . 
E 5 HOH A 41 341 66 HOH HOH . 
E 5 HOH A 42 342 51 HOH HOH . 
E 5 HOH A 43 343 25 HOH HOH . 
E 5 HOH A 44 344 1 HOH HOH . 
E 5 HOH A 45 345 75 HOH HOH . 
E 5 HOH A 46 346 53 HOH HOH . 
E 5 HOH A 47 347 17 HOH HOH . 
E 5 HOH A 48 348 71 HOH HOH . 
E 5 HOH A 49 349 70 HOH HOH . 
E 5 HOH A 50 350 24 HOH HOH . 
E 5 HOH A 51 351 44 HOH HOH . 
E 5 HOH A 52 352 49 HOH HOH . 
E 5 HOH A 53 353 18 HOH HOH . 
E 5 HOH A 54 354 64 HOH HOH . 
E 5 HOH A 55 355 47 HOH HOH . 
E 5 HOH A 56 356 63 HOH HOH . 
E 5 HOH A 57 357 30 HOH HOH . 
E 5 HOH A 58 358 33 HOH HOH . 
E 5 HOH A 59 359 14 HOH HOH . 
E 5 HOH A 60 360 39 HOH HOH . 
E 5 HOH A 61 361 46 HOH HOH . 
E 5 HOH A 62 362 68 HOH HOH . 
E 5 HOH A 63 363 40 HOH HOH . 
E 5 HOH A 64 364 41 HOH HOH . 
E 5 HOH A 65 365 23 HOH HOH . 
E 5 HOH A 66 366 20 HOH HOH . 
E 5 HOH A 67 367 60 HOH HOH . 
E 5 HOH A 68 368 59 HOH HOH . 
E 5 HOH A 69 369 57 HOH HOH . 
E 5 HOH A 70 370 52 HOH HOH . 
E 5 HOH A 71 371 77 HOH HOH . 
E 5 HOH A 72 372 69 HOH HOH . 
E 5 HOH A 73 373 72 HOH HOH . 
E 5 HOH A 74 374 74 HOH HOH . 
E 5 HOH A 75 375 73 HOH HOH . 
E 5 HOH A 76 376 35 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -17.203 
_atom_site.Cartn_y               17.399 
_atom_site.Cartn_z               -11.918 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        7.55 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           202 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#