data_5V6Z # _model_server_result.job_id kbV36xuCjFLBhYQlO6BzJQ _model_server_result.datetime_utc '2024-10-22 21:45:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5v6z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5V6Z # _exptl.entry_id 5V6Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.764 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-{[2-(4-chlorophenyl)-2-oxoethyl]sulfanyl}benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5V6Z _cell.length_a 89.344 _cell.length_b 89.344 _cell.length_c 184.898 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V6Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 100 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 100 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 246 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 246 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.105 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C15 H11 Cl O3 S' _chem_comp.formula_weight 306.764 _chem_comp.id 8YJ _chem_comp.mon_nstd_flag . _chem_comp.name '2-{[2-(4-chlorophenyl)-2-oxoethyl]sulfanyl}benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CLA CAM 8YJ sing 1 n n CAM CAL 8YJ doub 2 n y CAM CAN 8YJ sing 3 n y CAL CAK 8YJ sing 4 n y CAN CAO 8YJ doub 5 n y CAK CAJ 8YJ doub 6 n y CAO CAJ 8YJ sing 7 n y CAJ CAI 8YJ sing 8 n n CAI OAS 8YJ doub 9 n n CAI CAH 8YJ sing 10 n n SAG CAF 8YJ sing 11 n n SAG CAH 8YJ sing 12 n n CAE CAD 8YJ doub 13 n y CAE CAF 8YJ sing 14 n y CAD CAC 8YJ sing 15 n y CAF CAA 8YJ doub 16 n y CAC CAB 8YJ doub 17 n y CAA CAB 8YJ sing 18 n y CAA CAP 8YJ sing 19 n n OAR CAP 8YJ doub 20 n n CAP OAQ 8YJ sing 21 n n CAB H1 8YJ sing 22 n n CAC H2 8YJ sing 23 n n CAD H3 8YJ sing 24 n n CAE H4 8YJ sing 25 n n CAH H5 8YJ sing 26 n n CAH H6 8YJ sing 27 n n CAK H7 8YJ sing 28 n n CAL H8 8YJ sing 29 n n CAN H9 8YJ sing 30 n n CAO H10 8YJ sing 31 n n OAQ H11 8YJ sing 32 n n # _atom_sites.entry_id 5V6Z _atom_sites.fract_transf_matrix[1][1] 0.011193 _atom_sites.fract_transf_matrix[1][2] 0.006462 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012924 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005408 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 8YJ B 1 401 1 8YJ DRG . D 3 HOH A 1 401 34 HOH HOH . D 3 HOH A 2 402 21 HOH HOH . D 3 HOH A 3 403 25 HOH HOH . D 3 HOH A 4 404 42 HOH HOH . D 3 HOH A 5 405 40 HOH HOH . D 3 HOH A 6 406 7 HOH HOH . D 3 HOH A 7 407 39 HOH HOH . D 3 HOH A 8 408 65 HOH HOH . D 3 HOH A 9 409 10 HOH HOH . D 3 HOH A 10 410 4 HOH HOH . D 3 HOH A 11 411 33 HOH HOH . D 3 HOH A 12 412 41 HOH HOH . D 3 HOH A 13 413 35 HOH HOH . D 3 HOH A 14 414 36 HOH HOH . D 3 HOH A 15 415 32 HOH HOH . D 3 HOH A 16 416 73 HOH HOH . D 3 HOH A 17 417 72 HOH HOH . D 3 HOH A 18 418 45 HOH HOH . D 3 HOH A 19 419 31 HOH HOH . D 3 HOH A 20 420 43 HOH HOH . E 3 HOH B 1 501 69 HOH HOH . E 3 HOH B 2 502 23 HOH HOH . E 3 HOH B 3 503 6 HOH HOH . E 3 HOH B 4 504 13 HOH HOH . E 3 HOH B 5 505 58 HOH HOH . E 3 HOH B 6 506 9 HOH HOH . E 3 HOH B 7 507 22 HOH HOH . E 3 HOH B 8 508 60 HOH HOH . E 3 HOH B 9 509 51 HOH HOH . E 3 HOH B 10 510 29 HOH HOH . E 3 HOH B 11 511 50 HOH HOH . E 3 HOH B 12 512 3 HOH HOH . E 3 HOH B 13 513 56 HOH HOH . E 3 HOH B 14 514 48 HOH HOH . E 3 HOH B 15 515 71 HOH HOH . E 3 HOH B 16 516 26 HOH HOH . E 3 HOH B 17 517 12 HOH HOH . E 3 HOH B 18 518 2 HOH HOH . E 3 HOH B 19 519 44 HOH HOH . E 3 HOH B 20 520 67 HOH HOH . E 3 HOH B 21 521 74 HOH HOH . E 3 HOH B 22 522 17 HOH HOH . E 3 HOH B 23 523 52 HOH HOH . E 3 HOH B 24 524 1 HOH HOH . E 3 HOH B 25 525 37 HOH HOH . E 3 HOH B 26 526 70 HOH HOH . E 3 HOH B 27 527 16 HOH HOH . E 3 HOH B 28 528 14 HOH HOH . E 3 HOH B 29 529 68 HOH HOH . E 3 HOH B 30 530 18 HOH HOH . E 3 HOH B 31 531 62 HOH HOH . E 3 HOH B 32 532 49 HOH HOH . E 3 HOH B 33 533 28 HOH HOH . E 3 HOH B 34 534 11 HOH HOH . E 3 HOH B 35 535 66 HOH HOH . E 3 HOH B 36 536 20 HOH HOH . E 3 HOH B 37 537 61 HOH HOH . E 3 HOH B 38 538 59 HOH HOH . E 3 HOH B 39 539 27 HOH HOH . E 3 HOH B 40 540 63 HOH HOH . E 3 HOH B 41 541 38 HOH HOH . E 3 HOH B 42 542 19 HOH HOH . E 3 HOH B 43 543 30 HOH HOH . E 3 HOH B 44 544 47 HOH HOH . E 3 HOH B 45 545 57 HOH HOH . E 3 HOH B 46 546 53 HOH HOH . E 3 HOH B 47 547 54 HOH HOH . E 3 HOH B 48 548 24 HOH HOH . E 3 HOH B 49 549 64 HOH HOH . E 3 HOH B 50 550 15 HOH HOH . E 3 HOH B 51 551 55 HOH HOH . E 3 HOH B 52 552 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA 8YJ . . . C 2 43.958 -12.931 11.836 0.69 81.81 ? CAA 8YJ 401 B 1 HETATM 2 C CAB 8YJ . . . C 2 43.924 -14.195 12.387 0.69 79.81 ? CAB 8YJ 401 B 1 HETATM 3 C CAC 8YJ . . . C 2 43.331 -15.209 11.673 0.69 79.68 ? CAC 8YJ 401 B 1 HETATM 4 C CAD 8YJ . . . C 2 42.759 -14.984 10.435 0.69 83.86 ? CAD 8YJ 401 B 1 HETATM 5 C CAE 8YJ . . . C 2 42.758 -13.729 9.906 0.69 84.66 ? CAE 8YJ 401 B 1 HETATM 6 C CAF 8YJ . . . C 2 43.388 -12.699 10.58 0.69 83.05 ? CAF 8YJ 401 B 1 HETATM 7 C CAH 8YJ . . . C 2 41.745 -10.708 10.66 0.69 80.88 ? CAH 8YJ 401 B 1 HETATM 8 C CAI 8YJ . . . C 2 40.68 -10.873 9.604 0.69 82.58 ? CAI 8YJ 401 B 1 HETATM 9 C CAJ 8YJ . . . C 2 40.917 -10.201 8.262 0.69 84.14 ? CAJ 8YJ 401 B 1 HETATM 10 C CAK 8YJ . . . C 2 41.484 -10.9 7.197 0.69 90.68 ? CAK 8YJ 401 B 1 HETATM 11 C CAL 8YJ . . . C 2 41.718 -10.28 5.981 0.69 89.5 ? CAL 8YJ 401 B 1 HETATM 12 C CAM 8YJ . . . C 2 41.419 -8.936 5.856 0.69 89.16 ? CAM 8YJ 401 B 1 HETATM 13 C CAN 8YJ . . . C 2 40.887 -8.222 6.924 0.69 86.66 ? CAN 8YJ 401 B 1 HETATM 14 C CAO 8YJ . . . C 2 40.647 -8.85 8.132 0.69 81.34 ? CAO 8YJ 401 B 1 HETATM 15 C CAP 8YJ . . . C 2 44.602 -11.838 12.614 0.69 77.96 ? CAP 8YJ 401 B 1 HETATM 16 O OAQ 8YJ . . . C 2 43.979 -11.33 13.577 0.69 66.88 ? OAQ 8YJ 401 B 1 HETATM 17 O OAR 8YJ . . . C 2 45.776 -11.498 12.311 0.69 80.86 ? OAR 8YJ 401 B 1 HETATM 18 O OAS 8YJ . . . C 2 39.725 -11.565 9.808 0.69 76.95 ? OAS 8YJ 401 B 1 HETATM 19 S SAG 8YJ . . . C 2 43.298 -11.119 9.806 0.69 89.02 ? SAG 8YJ 401 B 1 HETATM 20 CL CLA 8YJ . . . C 2 41.734 -8.109 4.312 0.69 107.79 ? CLA 8YJ 401 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 20 #