data_5V71 # _model_server_result.job_id ICORS4hoCyXa5moNpn2a7g _model_server_result.datetime_utc '2024-11-22 12:20:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5v71 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":201}' # _entry.id 5V71 # _exptl.entry_id 5V71 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5V71 _cell.length_a 84.933 _cell.length_b 84.933 _cell.length_c 130.785 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V71 _symmetry.cell_setting ? _symmetry.Int_Tables_number 143 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,H,I,Y 1 1 B,J,K,L,Z 2 1 C,M,N,O,AA 3 1 D,P,Q,R,BA 4 1 E,S,T,U,CA 5 1 F,V,W,X,DA 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 J N N ? 2 M N N ? 2 P N N ? 2 S N N ? 2 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 12 1_555 I C28 8ZG . A 8ZG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? covale ? covale2 B SG CYS 13 B CYS 12 1_555 L C28 8ZG . B 8ZG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.811 ? covale ? covale3 C SG CYS 13 C CYS 12 1_555 O C28 8ZG . C 8ZG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? covale ? covale4 D SG CYS 13 D CYS 12 1_555 R C28 8ZG . D 8ZG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? covale ? covale5 E SG CYS 13 E CYS 12 1_555 U C28 8ZG . E 8ZG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.795 ? covale ? covale6 F SG CYS 13 F CYS 12 1_555 X C28 8ZG . F 8ZG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? metalc ? metalc1 A OG SER 18 A SER 17 1_555 H MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc2 G O3B GDP . A GDP 201 1_555 H MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc3 H MG MG . A MG 202 1_555 Y O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc4 H MG MG . A MG 202 1_555 Y O HOH . A HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc5 H MG MG . A MG 202 1_555 Y O HOH . A HOH 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc6 H MG MG . A MG 202 1_555 Y O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc7 B OG SER 18 B SER 17 1_555 K MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc8 J O3B GDP . B GDP 201 1_555 K MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc9 K MG MG . B MG 202 1_555 Z O HOH . B HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc10 K MG MG . B MG 202 1_555 Z O HOH . B HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc11 K MG MG . B MG 202 1_555 Z O HOH . B HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc12 K MG MG . B MG 202 1_555 Z O HOH . B HOH 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc13 C OG SER 18 C SER 17 1_555 N MG MG . C MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc14 M O2B GDP . C GDP 201 1_555 N MG MG . C MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc15 N MG MG . C MG 202 1_555 AA O HOH . C HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc16 N MG MG . C MG 202 1_555 AA O HOH . C HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc17 N MG MG . C MG 202 1_555 AA O HOH . C HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc18 N MG MG . C MG 202 1_555 AA O HOH . C HOH 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc19 D OG SER 18 D SER 17 1_555 Q MG MG . D MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc20 P O2B GDP . D GDP 201 1_555 Q MG MG . D MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc21 Q MG MG . D MG 202 1_555 BA O HOH . D HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc22 Q MG MG . D MG 202 1_555 BA O HOH . D HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc23 Q MG MG . D MG 202 1_555 BA O HOH . D HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc24 Q MG MG . D MG 202 1_555 BA O HOH . D HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc25 E OG SER 18 E SER 17 1_555 T MG MG . E MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc26 S O3B GDP . E GDP 201 1_555 T MG MG . E MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc27 T MG MG . E MG 202 1_555 CA O HOH . E HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc28 T MG MG . E MG 202 1_555 CA O HOH . E HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc29 T MG MG . E MG 202 1_555 CA O HOH . E HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc30 T MG MG . E MG 202 1_555 CA O HOH . E HOH 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc31 F OG SER 18 F SER 17 1_555 W MG MG . F MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc32 V O3B GDP . F GDP 201 1_555 W MG MG . F MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc33 W MG MG . F MG 202 1_555 DA O HOH . F HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc34 W MG MG . F MG 202 1_555 DA O HOH . F HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc35 W MG MG . F MG 202 1_555 DA O HOH . F HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc36 W MG MG . F MG 202 1_555 DA O HOH . F HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5V71 _atom_sites.fract_transf_matrix[1][1] 0.011774 _atom_sites.fract_transf_matrix[1][2] 0.006798 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013595 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007646 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 GDP A 1 201 170 GDP GDP . H 3 MG A 1 202 171 MG MG . I 4 8ZG A 1 203 172 8ZG LIG . J 2 GDP B 1 201 170 GDP GDP . K 3 MG B 1 202 171 MG MG . L 4 8ZG B 1 203 172 8ZG LIG . M 2 GDP C 1 201 170 GDP GDP . N 3 MG C 1 202 171 MG MG . O 4 8ZG C 1 203 172 8ZG LIG . P 2 GDP D 1 201 170 GDP GDP . Q 3 MG D 1 202 171 MG MG . R 4 8ZG D 1 203 172 8ZG LIG . S 2 GDP E 1 201 170 GDP GDP . T 3 MG E 1 202 171 MG MG . U 4 8ZG E 1 203 172 8ZG LIG . V 2 GDP F 1 201 170 GDP GDP . W 3 MG F 1 202 171 MG MG . X 4 8ZG F 1 203 172 8ZG LIG . Y 5 HOH A 1 301 118 HOH HOH . Y 5 HOH A 2 302 111 HOH HOH . Y 5 HOH A 3 303 108 HOH HOH . Y 5 HOH A 4 304 314 HOH HOH . Y 5 HOH A 5 305 58 HOH HOH . Y 5 HOH A 6 306 114 HOH HOH . Y 5 HOH A 7 307 1 HOH HOH . Y 5 HOH A 8 308 34 HOH HOH . Y 5 HOH A 9 309 105 HOH HOH . Y 5 HOH A 10 310 31 HOH HOH . Y 5 HOH A 11 311 2 HOH HOH . Y 5 HOH A 12 312 80 HOH HOH . Y 5 HOH A 13 313 342 HOH HOH . Y 5 HOH A 14 314 370 HOH HOH . Y 5 HOH A 15 315 38 HOH HOH . Y 5 HOH A 16 316 47 HOH HOH . Y 5 HOH A 17 317 3 HOH HOH . Y 5 HOH A 18 318 88 HOH HOH . Y 5 HOH A 19 319 325 HOH HOH . Y 5 HOH A 20 320 119 HOH HOH . Y 5 HOH A 21 321 115 HOH HOH . Y 5 HOH A 22 322 79 HOH HOH . Y 5 HOH A 23 323 81 HOH HOH . Y 5 HOH A 24 324 78 HOH HOH . Y 5 HOH A 25 325 113 HOH HOH . Y 5 HOH A 26 326 116 HOH HOH . Y 5 HOH A 27 327 129 HOH HOH . Y 5 HOH A 28 328 124 HOH HOH . Y 5 HOH A 29 329 4 HOH HOH . Y 5 HOH A 30 330 93 HOH HOH . Y 5 HOH A 31 331 90 HOH HOH . Y 5 HOH A 32 332 28 HOH HOH . Y 5 HOH A 33 333 123 HOH HOH . Y 5 HOH A 34 334 86 HOH HOH . Y 5 HOH A 35 335 120 HOH HOH . Y 5 HOH A 36 336 36 HOH HOH . Y 5 HOH A 37 337 82 HOH HOH . Y 5 HOH A 38 338 107 HOH HOH . Y 5 HOH A 39 339 85 HOH HOH . Y 5 HOH A 40 340 122 HOH HOH . Y 5 HOH A 41 341 100 HOH HOH . Y 5 HOH A 42 342 103 HOH HOH . Y 5 HOH A 43 343 33 HOH HOH . Y 5 HOH A 44 344 53 HOH HOH . Y 5 HOH A 45 345 69 HOH HOH . Y 5 HOH A 46 346 127 HOH HOH . Y 5 HOH A 47 347 50 HOH HOH . Y 5 HOH A 48 348 94 HOH HOH . Y 5 HOH A 49 349 323 HOH HOH . Y 5 HOH A 50 350 305 HOH HOH . Y 5 HOH A 51 351 322 HOH HOH . Y 5 HOH A 52 352 110 HOH HOH . Y 5 HOH A 53 353 104 HOH HOH . Y 5 HOH A 54 354 92 HOH HOH . Y 5 HOH A 55 355 95 HOH HOH . Y 5 HOH A 56 356 48 HOH HOH . Y 5 HOH A 57 357 318 HOH HOH . Y 5 HOH A 58 358 64 HOH HOH . Y 5 HOH A 59 359 340 HOH HOH . Y 5 HOH A 60 360 89 HOH HOH . Y 5 HOH A 61 361 320 HOH HOH . Y 5 HOH A 62 362 317 HOH HOH . Y 5 HOH A 63 363 83 HOH HOH . Y 5 HOH A 64 364 109 HOH HOH . Y 5 HOH A 65 365 341 HOH HOH . Y 5 HOH A 66 366 339 HOH HOH . Y 5 HOH A 67 367 112 HOH HOH . Y 5 HOH A 68 368 324 HOH HOH . Y 5 HOH A 69 369 87 HOH HOH . Y 5 HOH A 70 370 344 HOH HOH . Y 5 HOH A 71 371 369 HOH HOH . Y 5 HOH A 72 372 345 HOH HOH . Y 5 HOH A 73 373 321 HOH HOH . Y 5 HOH A 74 374 73 HOH HOH . Y 5 HOH A 75 375 343 HOH HOH . Y 5 HOH A 76 376 84 HOH HOH . Y 5 HOH A 77 377 68 HOH HOH . Y 5 HOH A 78 378 106 HOH HOH . Y 5 HOH A 79 379 125 HOH HOH . Y 5 HOH A 80 380 126 HOH HOH . Z 5 HOH B 1 301 160 HOH HOH . Z 5 HOH B 2 302 162 HOH HOH . Z 5 HOH B 3 303 135 HOH HOH . Z 5 HOH B 4 304 315 HOH HOH . Z 5 HOH B 5 305 164 HOH HOH . Z 5 HOH B 6 306 42 HOH HOH . Z 5 HOH B 7 307 141 HOH HOH . Z 5 HOH B 8 308 8 HOH HOH . Z 5 HOH B 9 309 151 HOH HOH . Z 5 HOH B 10 310 350 HOH HOH . Z 5 HOH B 11 311 7 HOH HOH . Z 5 HOH B 12 312 39 HOH HOH . Z 5 HOH B 13 313 152 HOH HOH . Z 5 HOH B 14 314 346 HOH HOH . Z 5 HOH B 15 315 6 HOH HOH . Z 5 HOH B 16 316 5 HOH HOH . Z 5 HOH B 17 317 144 HOH HOH . Z 5 HOH B 18 318 154 HOH HOH . Z 5 HOH B 19 319 138 HOH HOH . Z 5 HOH B 20 320 26 HOH HOH . Z 5 HOH B 21 321 373 HOH HOH . Z 5 HOH B 22 322 35 HOH HOH . Z 5 HOH B 23 323 330 HOH HOH . Z 5 HOH B 24 324 166 HOH HOH . Z 5 HOH B 25 325 157 HOH HOH . Z 5 HOH B 26 326 329 HOH HOH . Z 5 HOH B 27 327 136 HOH HOH . Z 5 HOH B 28 328 133 HOH HOH . Z 5 HOH B 29 329 161 HOH HOH . Z 5 HOH B 30 330 328 HOH HOH . Z 5 HOH B 31 331 239 HOH HOH . Z 5 HOH B 32 332 156 HOH HOH . Z 5 HOH B 33 333 159 HOH HOH . Z 5 HOH B 34 334 158 HOH HOH . Z 5 HOH B 35 335 347 HOH HOH . Z 5 HOH B 36 336 142 HOH HOH . Z 5 HOH B 37 337 171 HOH HOH . Z 5 HOH B 38 338 51 HOH HOH . Z 5 HOH B 39 339 148 HOH HOH . Z 5 HOH B 40 340 163 HOH HOH . Z 5 HOH B 41 341 70 HOH HOH . Z 5 HOH B 42 342 57 HOH HOH . Z 5 HOH B 43 343 137 HOH HOH . Z 5 HOH B 44 344 32 HOH HOH . Z 5 HOH B 45 345 140 HOH HOH . Z 5 HOH B 46 346 168 HOH HOH . Z 5 HOH B 47 347 355 HOH HOH . Z 5 HOH B 48 348 327 HOH HOH . Z 5 HOH B 49 349 77 HOH HOH . Z 5 HOH B 50 350 30 HOH HOH . Z 5 HOH B 51 351 143 HOH HOH . Z 5 HOH B 52 352 76 HOH HOH . Z 5 HOH B 53 353 167 HOH HOH . Z 5 HOH B 54 354 349 HOH HOH . Z 5 HOH B 55 355 316 HOH HOH . Z 5 HOH B 56 356 169 HOH HOH . Z 5 HOH B 57 357 266 HOH HOH . Z 5 HOH B 58 358 353 HOH HOH . Z 5 HOH B 59 359 352 HOH HOH . Z 5 HOH B 60 360 139 HOH HOH . Z 5 HOH B 61 361 351 HOH HOH . Z 5 HOH B 62 362 170 HOH HOH . Z 5 HOH B 63 363 354 HOH HOH . AA 5 HOH C 1 301 23 HOH HOH . AA 5 HOH C 2 302 43 HOH HOH . AA 5 HOH C 3 303 22 HOH HOH . AA 5 HOH C 4 304 193 HOH HOH . AA 5 HOH C 5 305 200 HOH HOH . AA 5 HOH C 6 306 192 HOH HOH . AA 5 HOH C 7 307 45 HOH HOH . AA 5 HOH C 8 308 29 HOH HOH . AA 5 HOH C 9 309 21 HOH HOH . AA 5 HOH C 10 310 196 HOH HOH . AA 5 HOH C 11 311 175 HOH HOH . AA 5 HOH C 12 312 188 HOH HOH . AA 5 HOH C 13 313 179 HOH HOH . AA 5 HOH C 14 314 197 HOH HOH . AA 5 HOH C 15 315 25 HOH HOH . AA 5 HOH C 16 316 24 HOH HOH . AA 5 HOH C 17 317 195 HOH HOH . AA 5 HOH C 18 318 177 HOH HOH . AA 5 HOH C 19 319 205 HOH HOH . AA 5 HOH C 20 320 62 HOH HOH . AA 5 HOH C 21 321 189 HOH HOH . AA 5 HOH C 22 322 199 HOH HOH . AA 5 HOH C 23 323 183 HOH HOH . AA 5 HOH C 24 324 187 HOH HOH . AA 5 HOH C 25 325 332 HOH HOH . AA 5 HOH C 26 326 66 HOH HOH . AA 5 HOH C 27 327 174 HOH HOH . AA 5 HOH C 28 328 368 HOH HOH . AA 5 HOH C 29 329 357 HOH HOH . AA 5 HOH C 30 330 356 HOH HOH . AA 5 HOH C 31 331 208 HOH HOH . AA 5 HOH C 32 332 185 HOH HOH . AA 5 HOH C 33 333 172 HOH HOH . AA 5 HOH C 34 334 186 HOH HOH . AA 5 HOH C 35 335 59 HOH HOH . AA 5 HOH C 36 336 55 HOH HOH . AA 5 HOH C 37 337 184 HOH HOH . AA 5 HOH C 38 338 194 HOH HOH . AA 5 HOH C 39 339 331 HOH HOH . AA 5 HOH C 40 340 202 HOH HOH . AA 5 HOH C 41 341 180 HOH HOH . AA 5 HOH C 42 342 210 HOH HOH . AA 5 HOH C 43 343 204 HOH HOH . AA 5 HOH C 44 344 182 HOH HOH . AA 5 HOH C 45 345 201 HOH HOH . AA 5 HOH C 46 346 203 HOH HOH . AA 5 HOH C 47 347 75 HOH HOH . AA 5 HOH C 48 348 206 HOH HOH . AA 5 HOH C 49 349 198 HOH HOH . AA 5 HOH C 50 350 358 HOH HOH . AA 5 HOH C 51 351 178 HOH HOH . BA 5 HOH D 1 301 145 HOH HOH . BA 5 HOH D 2 302 248 HOH HOH . BA 5 HOH D 3 303 17 HOH HOH . BA 5 HOH D 4 304 246 HOH HOH . BA 5 HOH D 5 305 131 HOH HOH . BA 5 HOH D 6 306 244 HOH HOH . BA 5 HOH D 7 307 247 HOH HOH . BA 5 HOH D 8 308 20 HOH HOH . BA 5 HOH D 9 309 216 HOH HOH . BA 5 HOH D 10 310 212 HOH HOH . BA 5 HOH D 11 311 225 HOH HOH . BA 5 HOH D 12 312 240 HOH HOH . BA 5 HOH D 13 313 52 HOH HOH . BA 5 HOH D 14 314 249 HOH HOH . BA 5 HOH D 15 315 132 HOH HOH . BA 5 HOH D 16 316 176 HOH HOH . BA 5 HOH D 17 317 44 HOH HOH . BA 5 HOH D 18 318 18 HOH HOH . BA 5 HOH D 19 319 231 HOH HOH . BA 5 HOH D 20 320 236 HOH HOH . BA 5 HOH D 21 321 207 HOH HOH . BA 5 HOH D 22 322 19 HOH HOH . BA 5 HOH D 23 323 155 HOH HOH . BA 5 HOH D 24 324 146 HOH HOH . BA 5 HOH D 25 325 211 HOH HOH . BA 5 HOH D 26 326 149 HOH HOH . BA 5 HOH D 27 327 147 HOH HOH . BA 5 HOH D 28 328 251 HOH HOH . BA 5 HOH D 29 329 233 HOH HOH . BA 5 HOH D 30 330 335 HOH HOH . BA 5 HOH D 31 331 61 HOH HOH . BA 5 HOH D 32 332 214 HOH HOH . BA 5 HOH D 33 333 215 HOH HOH . BA 5 HOH D 34 334 238 HOH HOH . BA 5 HOH D 35 335 63 HOH HOH . BA 5 HOH D 36 336 165 HOH HOH . BA 5 HOH D 37 337 253 HOH HOH . BA 5 HOH D 38 338 255 HOH HOH . BA 5 HOH D 39 339 173 HOH HOH . BA 5 HOH D 40 340 221 HOH HOH . BA 5 HOH D 41 341 230 HOH HOH . BA 5 HOH D 42 342 222 HOH HOH . BA 5 HOH D 43 343 245 HOH HOH . BA 5 HOH D 44 344 72 HOH HOH . BA 5 HOH D 45 345 235 HOH HOH . BA 5 HOH D 46 346 220 HOH HOH . BA 5 HOH D 47 347 243 HOH HOH . BA 5 HOH D 48 348 250 HOH HOH . BA 5 HOH D 49 349 359 HOH HOH . BA 5 HOH D 50 350 334 HOH HOH . BA 5 HOH D 51 351 226 HOH HOH . BA 5 HOH D 52 352 336 HOH HOH . BA 5 HOH D 53 353 217 HOH HOH . BA 5 HOH D 54 354 234 HOH HOH . BA 5 HOH D 55 355 153 HOH HOH . BA 5 HOH D 56 356 309 HOH HOH . BA 5 HOH D 57 357 150 HOH HOH . BA 5 HOH D 58 358 74 HOH HOH . BA 5 HOH D 59 359 218 HOH HOH . BA 5 HOH D 60 360 223 HOH HOH . BA 5 HOH D 61 361 227 HOH HOH . BA 5 HOH D 62 362 229 HOH HOH . BA 5 HOH D 63 363 209 HOH HOH . BA 5 HOH D 64 364 252 HOH HOH . BA 5 HOH D 65 365 348 HOH HOH . BA 5 HOH D 66 366 213 HOH HOH . BA 5 HOH D 67 367 237 HOH HOH . BA 5 HOH D 68 368 134 HOH HOH . BA 5 HOH D 69 369 228 HOH HOH . BA 5 HOH D 70 370 333 HOH HOH . BA 5 HOH D 71 371 326 HOH HOH . BA 5 HOH D 72 372 232 HOH HOH . BA 5 HOH D 73 373 372 HOH HOH . BA 5 HOH D 74 374 241 HOH HOH . BA 5 HOH D 75 375 219 HOH HOH . BA 5 HOH D 76 376 360 HOH HOH . BA 5 HOH D 77 377 254 HOH HOH . BA 5 HOH D 78 378 224 HOH HOH . BA 5 HOH D 79 379 242 HOH HOH . CA 5 HOH E 1 301 16 HOH HOH . CA 5 HOH E 2 302 312 HOH HOH . CA 5 HOH E 3 303 102 HOH HOH . CA 5 HOH E 4 304 257 HOH HOH . CA 5 HOH E 5 305 37 HOH HOH . CA 5 HOH E 6 306 261 HOH HOH . CA 5 HOH E 7 307 279 HOH HOH . CA 5 HOH E 8 308 67 HOH HOH . CA 5 HOH E 9 309 264 HOH HOH . CA 5 HOH E 10 310 277 HOH HOH . CA 5 HOH E 11 311 269 HOH HOH . CA 5 HOH E 12 312 259 HOH HOH . CA 5 HOH E 13 313 311 HOH HOH . CA 5 HOH E 14 314 13 HOH HOH . CA 5 HOH E 15 315 15 HOH HOH . CA 5 HOH E 16 316 14 HOH HOH . CA 5 HOH E 17 317 361 HOH HOH . CA 5 HOH E 18 318 256 HOH HOH . CA 5 HOH E 19 319 101 HOH HOH . CA 5 HOH E 20 320 60 HOH HOH . CA 5 HOH E 21 321 271 HOH HOH . CA 5 HOH E 22 322 270 HOH HOH . CA 5 HOH E 23 323 374 HOH HOH . CA 5 HOH E 24 324 280 HOH HOH . CA 5 HOH E 25 325 258 HOH HOH . CA 5 HOH E 26 326 91 HOH HOH . CA 5 HOH E 27 327 262 HOH HOH . CA 5 HOH E 28 328 362 HOH HOH . CA 5 HOH E 29 329 267 HOH HOH . CA 5 HOH E 30 330 273 HOH HOH . CA 5 HOH E 31 331 65 HOH HOH . CA 5 HOH E 32 332 276 HOH HOH . CA 5 HOH E 33 333 313 HOH HOH . CA 5 HOH E 34 334 310 HOH HOH . CA 5 HOH E 35 335 263 HOH HOH . CA 5 HOH E 36 336 275 HOH HOH . CA 5 HOH E 37 337 274 HOH HOH . CA 5 HOH E 38 338 260 HOH HOH . CA 5 HOH E 39 339 268 HOH HOH . CA 5 HOH E 40 340 272 HOH HOH . CA 5 HOH E 41 341 363 HOH HOH . DA 5 HOH F 1 301 364 HOH HOH . DA 5 HOH F 2 302 56 HOH HOH . DA 5 HOH F 3 303 291 HOH HOH . DA 5 HOH F 4 304 40 HOH HOH . DA 5 HOH F 5 305 9 HOH HOH . DA 5 HOH F 6 306 98 HOH HOH . DA 5 HOH F 7 307 295 HOH HOH . DA 5 HOH F 8 308 294 HOH HOH . DA 5 HOH F 9 309 11 HOH HOH . DA 5 HOH F 10 310 337 HOH HOH . DA 5 HOH F 11 311 128 HOH HOH . DA 5 HOH F 12 312 12 HOH HOH . DA 5 HOH F 13 313 298 HOH HOH . DA 5 HOH F 14 314 10 HOH HOH . DA 5 HOH F 15 315 292 HOH HOH . DA 5 HOH F 16 316 296 HOH HOH . DA 5 HOH F 17 317 281 HOH HOH . DA 5 HOH F 18 318 303 HOH HOH . DA 5 HOH F 19 319 300 HOH HOH . DA 5 HOH F 20 320 290 HOH HOH . DA 5 HOH F 21 321 297 HOH HOH . DA 5 HOH F 22 322 71 HOH HOH . DA 5 HOH F 23 323 286 HOH HOH . DA 5 HOH F 24 324 293 HOH HOH . DA 5 HOH F 25 325 288 HOH HOH . DA 5 HOH F 26 326 283 HOH HOH . DA 5 HOH F 27 327 284 HOH HOH . DA 5 HOH F 28 328 27 HOH HOH . DA 5 HOH F 29 329 99 HOH HOH . DA 5 HOH F 30 330 190 HOH HOH . DA 5 HOH F 31 331 46 HOH HOH . DA 5 HOH F 32 332 306 HOH HOH . DA 5 HOH F 33 333 302 HOH HOH . DA 5 HOH F 34 334 366 HOH HOH . DA 5 HOH F 35 335 299 HOH HOH . DA 5 HOH F 36 336 319 HOH HOH . DA 5 HOH F 37 337 96 HOH HOH . DA 5 HOH F 38 338 285 HOH HOH . DA 5 HOH F 39 339 278 HOH HOH . DA 5 HOH F 40 340 301 HOH HOH . DA 5 HOH F 41 341 191 HOH HOH . DA 5 HOH F 42 342 304 HOH HOH . DA 5 HOH F 43 343 97 HOH HOH . DA 5 HOH F 44 344 181 HOH HOH . DA 5 HOH F 45 345 338 HOH HOH . DA 5 HOH F 46 346 49 HOH HOH . DA 5 HOH F 47 347 282 HOH HOH . DA 5 HOH F 48 348 130 HOH HOH . DA 5 HOH F 49 349 41 HOH HOH . DA 5 HOH F 50 350 371 HOH HOH . DA 5 HOH F 51 351 117 HOH HOH . DA 5 HOH F 52 352 367 HOH HOH . DA 5 HOH F 53 353 307 HOH HOH . DA 5 HOH F 54 354 121 HOH HOH . DA 5 HOH F 55 355 287 HOH HOH . DA 5 HOH F 56 356 365 HOH HOH . DA 5 HOH F 57 357 54 HOH HOH . DA 5 HOH F 58 358 289 HOH HOH . DA 5 HOH F 59 359 308 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . S 2 -11.86 107.891 -39.455 1 34.69 ? PB GDP 201 E 1 HETATM 2 O O1B GDP . . . S 2 -10.932 107.106 -40.37 1 36.26 ? O1B GDP 201 E 1 HETATM 3 O O2B GDP . . . S 2 -11.06 108.611 -38.388 1 37.45 ? O2B GDP 201 E 1 HETATM 4 O O3B GDP . . . S 2 -12.635 108.875 -40.313 1 24.98 ? O3B GDP 201 E 1 HETATM 5 O O3A GDP . . . S 2 -12.851 106.849 -38.737 1 28.65 ? O3A GDP 201 E 1 HETATM 6 P PA GDP . . . S 2 -14.438 106.721 -39.039 1 29.42 ? PA GDP 201 E 1 HETATM 7 O O1A GDP . . . S 2 -14.7 106.225 -40.45 1 34.58 ? O1A GDP 201 E 1 HETATM 8 O O2A GDP . . . S 2 -15.122 107.979 -38.583 1 24.85 ? O2A GDP 201 E 1 HETATM 9 O O5' GDP . . . S 2 -14.747 105.534 -38 1 33.65 ? O5' GDP 201 E 1 HETATM 10 C C5' GDP . . . S 2 -14.106 104.259 -38.097 1 33.66 ? C5' GDP 201 E 1 HETATM 11 C C4' GDP . . . S 2 -15 103.178 -37.501 1 32.81 ? C4' GDP 201 E 1 HETATM 12 O O4' GDP . . . S 2 -15.124 103.337 -36.081 1 30.52 ? O4' GDP 201 E 1 HETATM 13 C C3' GDP . . . S 2 -16.412 103.293 -38.043 1 34.05 ? C3' GDP 201 E 1 HETATM 14 O O3' GDP . . . S 2 -16.917 101.96 -38.075 1 34.66 ? O3' GDP 201 E 1 HETATM 15 C C2' GDP . . . S 2 -17.174 104.064 -36.976 1 30.73 ? C2' GDP 201 E 1 HETATM 16 O O2' GDP . . . S 2 -18.563 103.733 -36.92 1 36.73 ? O2' GDP 201 E 1 HETATM 17 C C1' GDP . . . S 2 -16.479 103.591 -35.719 1 28.78 ? C1' GDP 201 E 1 HETATM 18 N N9 GDP . . . S 2 -16.5 104.595 -34.629 1 32.49 ? N9 GDP 201 E 1 HETATM 19 C C8 GDP . . . S 2 -16.083 105.882 -34.739 1 31.78 ? C8 GDP 201 E 1 HETATM 20 N N7 GDP . . . S 2 -16.214 106.49 -33.525 1 30.4 ? N7 GDP 201 E 1 HETATM 21 C C5 GDP . . . S 2 -16.715 105.568 -32.674 1 29.11 ? C5 GDP 201 E 1 HETATM 22 C C6 GDP . . . S 2 -17.045 105.623 -31.312 1 31.94 ? C6 GDP 201 E 1 HETATM 23 O O6 GDP . . . S 2 -16.878 106.712 -30.704 1 36.08 ? O6 GDP 201 E 1 HETATM 24 N N1 GDP . . . S 2 -17.54 104.553 -30.654 1 29.35 ? N1 GDP 201 E 1 HETATM 25 C C2 GDP . . . S 2 -17.68 103.427 -31.387 1 25.45 ? C2 GDP 201 E 1 HETATM 26 N N2 GDP . . . S 2 -18.167 102.322 -30.757 1 21.26 ? N2 GDP 201 E 1 HETATM 27 N N3 GDP . . . S 2 -17.391 103.267 -32.717 1 27.97 ? N3 GDP 201 E 1 HETATM 28 C C4 GDP . . . S 2 -16.894 104.378 -33.365 1 30.81 ? C4 GDP 201 E 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #