data_5V79
#
_model_server_result.job_id            dkWawS54YNbL2vzB6WJrpQ 
_model_server_result.datetime_utc      '2024-11-08 18:45:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5v79 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":303}' 
#
_entry.id    5V79 
#
_exptl.entry_id    5V79 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.005 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NITRATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.67 
_cell.angle_gamma         90 
_cell.entry_id            5V79 
_cell.length_a            95.364 
_cell.length_b            85.621 
_cell.length_c            83.865 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5V79 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA tetrameric 4 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,G 1 1 
B,F,H 2 1 
A,B,C,D,E,F,G,H 3 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_557 -x,y,-z+2 -1 0 0 0 1 0 0 0 -1 -56.458297 0 157.942438 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
_chem_comp.formula           'N O3 -1' 
_chem_comp.formula_weight    62.005 
_chem_comp.id                NO3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NITRATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N O1 NO3 doub 276 n n 
N O2 NO3 sing 277 n n 
N O3 NO3 sing 278 n n 
#
_atom_sites.entry_id                     5V79 
_atom_sites.fract_transf_matrix[1][1]    0.010486 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003748 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011679 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012663 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 8Y4 A 1 301 2 8Y4 UNL . 
D 3 NO3 A 1 302 1 NO3 NO3 . 
E 3 NO3 A 1 303 2 NO3 NO3 . 
F 2 8Y4 B 1 301 1 8Y4 UNL . 
G 4 HOH A 1 401 18 HOH HOH . 
G 4 HOH A 2 402 72 HOH HOH . 
G 4 HOH A 3 403 3 HOH HOH . 
G 4 HOH A 4 404 107 HOH HOH . 
G 4 HOH A 5 405 31 HOH HOH . 
G 4 HOH A 6 406 64 HOH HOH . 
G 4 HOH A 7 407 47 HOH HOH . 
G 4 HOH A 8 408 53 HOH HOH . 
G 4 HOH A 9 409 35 HOH HOH . 
G 4 HOH A 10 410 74 HOH HOH . 
G 4 HOH A 11 411 48 HOH HOH . 
G 4 HOH A 12 412 17 HOH HOH . 
G 4 HOH A 13 413 73 HOH HOH . 
G 4 HOH A 14 414 61 HOH HOH . 
G 4 HOH A 15 415 29 HOH HOH . 
G 4 HOH A 16 416 91 HOH HOH . 
G 4 HOH A 17 417 93 HOH HOH . 
G 4 HOH A 18 418 88 HOH HOH . 
G 4 HOH A 19 419 9 HOH HOH . 
G 4 HOH A 20 420 55 HOH HOH . 
G 4 HOH A 21 421 40 HOH HOH . 
G 4 HOH A 22 422 117 HOH HOH . 
G 4 HOH A 23 423 2 HOH HOH . 
G 4 HOH A 24 424 76 HOH HOH . 
G 4 HOH A 25 425 79 HOH HOH . 
G 4 HOH A 26 426 60 HOH HOH . 
G 4 HOH A 27 427 30 HOH HOH . 
G 4 HOH A 28 428 1 HOH HOH . 
G 4 HOH A 29 429 28 HOH HOH . 
G 4 HOH A 30 430 8 HOH HOH . 
G 4 HOH A 31 431 58 HOH HOH . 
G 4 HOH A 32 432 4 HOH HOH . 
G 4 HOH A 33 433 38 HOH HOH . 
G 4 HOH A 34 434 98 HOH HOH . 
G 4 HOH A 35 435 6 HOH HOH . 
G 4 HOH A 36 436 41 HOH HOH . 
G 4 HOH A 37 437 86 HOH HOH . 
G 4 HOH A 38 438 92 HOH HOH . 
G 4 HOH A 39 439 101 HOH HOH . 
G 4 HOH A 40 440 36 HOH HOH . 
G 4 HOH A 41 441 111 HOH HOH . 
G 4 HOH A 42 442 62 HOH HOH . 
G 4 HOH A 43 443 33 HOH HOH . 
G 4 HOH A 44 444 108 HOH HOH . 
G 4 HOH A 45 445 95 HOH HOH . 
G 4 HOH A 46 446 116 HOH HOH . 
G 4 HOH A 47 447 89 HOH HOH . 
G 4 HOH A 48 448 85 HOH HOH . 
G 4 HOH A 49 449 5 HOH HOH . 
G 4 HOH A 50 450 43 HOH HOH . 
G 4 HOH A 51 451 39 HOH HOH . 
G 4 HOH A 52 452 51 HOH HOH . 
G 4 HOH A 53 453 44 HOH HOH . 
G 4 HOH A 54 454 84 HOH HOH . 
G 4 HOH A 55 455 66 HOH HOH . 
G 4 HOH A 56 456 67 HOH HOH . 
G 4 HOH A 57 457 45 HOH HOH . 
G 4 HOH A 58 458 10 HOH HOH . 
G 4 HOH A 59 459 83 HOH HOH . 
G 4 HOH A 60 460 94 HOH HOH . 
G 4 HOH A 61 461 7 HOH HOH . 
G 4 HOH A 62 462 49 HOH HOH . 
G 4 HOH A 63 463 82 HOH HOH . 
G 4 HOH A 64 464 63 HOH HOH . 
G 4 HOH A 65 465 77 HOH HOH . 
G 4 HOH A 66 466 109 HOH HOH . 
G 4 HOH A 67 467 78 HOH HOH . 
G 4 HOH A 68 468 87 HOH HOH . 
G 4 HOH A 69 469 68 HOH HOH . 
H 4 HOH B 1 401 24 HOH HOH . 
H 4 HOH B 2 402 32 HOH HOH . 
H 4 HOH B 3 403 110 HOH HOH . 
H 4 HOH B 4 404 75 HOH HOH . 
H 4 HOH B 5 405 11 HOH HOH . 
H 4 HOH B 6 406 20 HOH HOH . 
H 4 HOH B 7 407 57 HOH HOH . 
H 4 HOH B 8 408 46 HOH HOH . 
H 4 HOH B 9 409 50 HOH HOH . 
H 4 HOH B 10 410 54 HOH HOH . 
H 4 HOH B 11 411 26 HOH HOH . 
H 4 HOH B 12 412 104 HOH HOH . 
H 4 HOH B 13 413 13 HOH HOH . 
H 4 HOH B 14 414 42 HOH HOH . 
H 4 HOH B 15 415 16 HOH HOH . 
H 4 HOH B 16 416 113 HOH HOH . 
H 4 HOH B 17 417 14 HOH HOH . 
H 4 HOH B 18 418 56 HOH HOH . 
H 4 HOH B 19 419 103 HOH HOH . 
H 4 HOH B 20 420 115 HOH HOH . 
H 4 HOH B 21 421 71 HOH HOH . 
H 4 HOH B 22 422 25 HOH HOH . 
H 4 HOH B 23 423 37 HOH HOH . 
H 4 HOH B 24 424 21 HOH HOH . 
H 4 HOH B 25 425 102 HOH HOH . 
H 4 HOH B 26 426 22 HOH HOH . 
H 4 HOH B 27 427 112 HOH HOH . 
H 4 HOH B 28 428 90 HOH HOH . 
H 4 HOH B 29 429 69 HOH HOH . 
H 4 HOH B 30 430 19 HOH HOH . 
H 4 HOH B 31 431 96 HOH HOH . 
H 4 HOH B 32 432 52 HOH HOH . 
H 4 HOH B 33 433 100 HOH HOH . 
H 4 HOH B 34 434 27 HOH HOH . 
H 4 HOH B 35 435 23 HOH HOH . 
H 4 HOH B 36 436 114 HOH HOH . 
H 4 HOH B 37 437 70 HOH HOH . 
H 4 HOH B 38 438 59 HOH HOH . 
H 4 HOH B 39 439 15 HOH HOH . 
H 4 HOH B 40 440 105 HOH HOH . 
H 4 HOH B 41 441 80 HOH HOH . 
H 4 HOH B 42 442 12 HOH HOH . 
H 4 HOH B 43 443 106 HOH HOH . 
H 4 HOH B 44 444 97 HOH HOH . 
H 4 HOH B 45 445 65 HOH HOH . 
H 4 HOH B 46 446 81 HOH HOH . 
H 4 HOH B 47 447 99 HOH HOH . 
H 4 HOH B 48 448 34 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NO3 . . . E 3 -26.261 13.562 94.758 1 44.25 ? N NO3 303 A 1 
HETATM 2 O O1 NO3 . . . E 3 -27.405 13.998 94.673 1 45.43 ? O1 NO3 303 A 1 
HETATM 3 O O2 NO3 . . . E 3 -25.499 13.452 93.59 1 44.74 ? O2 NO3 303 A 1 
HETATM 4 O O3 NO3 . . . E 3 -25.713 13.186 96 1 40.62 ? O3 NO3 303 A 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           4 
#