data_5V7P
#
_model_server_result.job_id            tGtFGeJgDcVqi5nZBs2ejw 
_model_server_result.datetime_utc      '2025-01-09 01:42:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5v7p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":320}' 
#
_entry.id    5V7P 
#
_exptl.entry_id    5V7P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5V7P 
_cell.length_a            40.554 
_cell.length_b            87.691 
_cell.length_c            147.681 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5V7P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 R N N 
? 6 S N N 
? 6 T N N 
? 6 U N N 
? 6 V N N 
? 6 W N N 
? 6 X N N 
? 6 Y N N 
? 6 Z N N 
? 6 AA N N 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                MPG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C3 MPG sing 268 n n 
C2 C1 MPG sing 269 n n 
C3 C4 MPG sing 270 n n 
C4 C5 MPG sing 271 n n 
C5 C6 MPG sing 272 n n 
C6 C7 MPG sing 273 n n 
C7 C8 MPG sing 274 n n 
C8 C9 MPG sing 275 n n 
C9 C10 MPG doub 276 z n 
C10 C11 MPG sing 277 n n 
C11 C12 MPG sing 278 n n 
C12 C13 MPG sing 279 n n 
C13 C14 MPG sing 280 n n 
C14 C15 MPG sing 281 n n 
C15 C16 MPG sing 282 n n 
C16 C17 MPG sing 283 n n 
C17 C18 MPG sing 284 n n 
O1 C1 MPG sing 285 n n 
O1 CX3 MPG sing 286 n n 
CXD O2 MPG sing 287 n n 
CXD C21 MPG sing 288 n n 
CXD CX3 MPG sing 289 n n 
C21 O3 MPG sing 290 n n 
C2 H21C MPG sing 291 n n 
C2 H22C MPG sing 292 n n 
C3 H31C MPG sing 293 n n 
C3 H32C MPG sing 294 n n 
CX3 O4 MPG doub 295 n n 
C4 H41C MPG sing 296 n n 
C4 H42C MPG sing 297 n n 
C5 H51C MPG sing 298 n n 
C5 H52C MPG sing 299 n n 
C6 H61C MPG sing 300 n n 
C6 H62C MPG sing 301 n n 
C7 H71C MPG sing 302 n n 
C7 H72C MPG sing 303 n n 
C8 H81C MPG sing 304 n n 
C8 H82C MPG sing 305 n n 
C9 H9 MPG sing 306 n n 
C10 H10 MPG sing 307 n n 
C11 H111 MPG sing 308 n n 
C11 H112 MPG sing 309 n n 
C12 H121 MPG sing 310 n n 
C12 H122 MPG sing 311 n n 
C13 H131 MPG sing 312 n n 
C13 H132 MPG sing 313 n n 
C14 H141 MPG sing 314 n n 
C14 H142 MPG sing 315 n n 
C15 H151 MPG sing 316 n n 
C15 H152 MPG sing 317 n n 
C16 H161 MPG sing 318 n n 
C16 H162 MPG sing 319 n n 
C17 H171 MPG sing 320 n n 
C17 H172 MPG sing 321 n n 
C18 H181 MPG sing 322 n n 
C18 H182 MPG sing 323 n n 
C18 H183 MPG sing 324 n n 
C1 HX31 MPG sing 325 n n 
C1 HX32 MPG sing 326 n n 
CXD HXD MPG sing 327 n n 
O2 H2 MPG sing 328 n n 
C21 H211 MPG sing 329 n n 
C21 H212 MPG sing 330 n n 
O3 H3 MPG sing 331 n n 
#
_atom_sites.entry_id                     5V7P 
_atom_sites.fract_transf_matrix[1][1]    0.024658 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011404 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006771 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SAH A 1 301 1 SAH SAH . 
D 4 UND A 1 302 13 UND UND . 
E 4 UND A 1 303 14 UND UND . 
F 5 D10 A 1 304 16 D10 UND . 
G 5 D10 A 1 305 17 D10 UND . 
H 5 D10 A 1 306 18 D10 UND . 
I 5 D10 A 1 307 19 D10 UND . 
J 5 D10 A 1 308 20 D10 UND . 
K 4 UND A 1 309 21 UND UND . 
L 5 D10 A 1 310 22 D10 UND . 
M 5 D10 A 1 311 23 D10 UND . 
N 5 D10 A 1 312 25 D10 UND . 
O 5 D10 A 1 313 26 D10 UND . 
P 5 D10 A 1 314 27 D10 UND . 
Q 5 D10 A 1 315 28 D10 UND . 
R 6 MPG A 1 316 101 MPG MPG . 
S 6 MPG A 1 317 104 MPG MPG . 
T 6 MPG A 1 318 106 MPG MPG . 
U 6 MPG A 1 319 107 MPG MPG . 
V 6 MPG A 1 320 108 MPG MPG . 
W 6 MPG A 1 321 109 MPG MPG . 
X 6 MPG A 1 322 110 MPG MPG . 
Y 6 MPG A 1 323 111 MPG MPG . 
Z 6 MPG A 1 324 112 MPG MPG . 
AA 6 MPG A 1 325 200 MPG MPG . 
BA 7 HOH A 1 401 10 HOH HOH . 
BA 7 HOH A 2 402 7 HOH HOH . 
BA 7 HOH A 3 403 21 HOH HOH . 
BA 7 HOH A 4 404 57 HOH HOH . 
BA 7 HOH A 5 405 33 HOH HOH . 
BA 7 HOH A 6 406 56 HOH HOH . 
BA 7 HOH A 7 407 119 HOH HOH . 
BA 7 HOH A 8 408 82 HOH HOH . 
BA 7 HOH A 9 409 90 HOH HOH . 
BA 7 HOH A 10 410 40 HOH HOH . 
BA 7 HOH A 11 411 27 HOH HOH . 
BA 7 HOH A 12 412 106 HOH HOH . 
BA 7 HOH A 13 413 35 HOH HOH . 
BA 7 HOH A 14 414 37 HOH HOH . 
BA 7 HOH A 15 415 6 HOH HOH . 
BA 7 HOH A 16 416 2 HOH HOH . 
BA 7 HOH A 17 417 5 HOH HOH . 
BA 7 HOH A 18 418 28 HOH HOH . 
BA 7 HOH A 19 419 13 HOH HOH . 
BA 7 HOH A 20 420 19 HOH HOH . 
BA 7 HOH A 21 421 61 HOH HOH . 
BA 7 HOH A 22 422 130 HOH HOH . 
BA 7 HOH A 23 423 63 HOH HOH . 
BA 7 HOH A 24 424 17 HOH HOH . 
BA 7 HOH A 25 425 3 HOH HOH . 
BA 7 HOH A 26 426 131 HOH HOH . 
BA 7 HOH A 27 427 36 HOH HOH . 
BA 7 HOH A 28 428 41 HOH HOH . 
BA 7 HOH A 29 429 73 HOH HOH . 
BA 7 HOH A 30 430 9 HOH HOH . 
BA 7 HOH A 31 431 104 HOH HOH . 
BA 7 HOH A 32 432 45 HOH HOH . 
BA 7 HOH A 33 433 94 HOH HOH . 
BA 7 HOH A 34 434 55 HOH HOH . 
BA 7 HOH A 35 435 60 HOH HOH . 
BA 7 HOH A 36 436 123 HOH HOH . 
BA 7 HOH A 37 437 4 HOH HOH . 
BA 7 HOH A 38 438 50 HOH HOH . 
BA 7 HOH A 39 439 84 HOH HOH . 
BA 7 HOH A 40 440 44 HOH HOH . 
BA 7 HOH A 41 441 102 HOH HOH . 
BA 7 HOH A 42 442 136 HOH HOH . 
BA 7 HOH A 43 443 134 HOH HOH . 
BA 7 HOH A 44 444 135 HOH HOH . 
BA 7 HOH A 45 445 95 HOH HOH . 
BA 7 HOH A 46 446 42 HOH HOH . 
BA 7 HOH A 47 447 39 HOH HOH . 
BA 7 HOH A 48 448 141 HOH HOH . 
BA 7 HOH A 49 449 93 HOH HOH . 
BA 7 HOH A 50 450 107 HOH HOH . 
BA 7 HOH A 51 451 100 HOH HOH . 
CA 7 HOH D 1 101 11 HOH HOH . 
CA 7 HOH D 2 102 128 HOH HOH . 
CA 7 HOH D 3 103 23 HOH HOH . 
CA 7 HOH D 4 104 25 HOH HOH . 
CA 7 HOH D 5 105 32 HOH HOH . 
CA 7 HOH D 6 106 66 HOH HOH . 
CA 7 HOH D 7 107 116 HOH HOH . 
CA 7 HOH D 8 108 72 HOH HOH . 
CA 7 HOH D 9 109 109 HOH HOH . 
CA 7 HOH D 10 110 22 HOH HOH . 
CA 7 HOH D 11 111 115 HOH HOH . 
CA 7 HOH D 12 112 101 HOH HOH . 
CA 7 HOH D 13 113 12 HOH HOH . 
CA 7 HOH D 14 114 140 HOH HOH . 
CA 7 HOH D 15 115 74 HOH HOH . 
CA 7 HOH D 16 116 24 HOH HOH . 
CA 7 HOH D 17 117 70 HOH HOH . 
CA 7 HOH D 18 118 86 HOH HOH . 
CA 7 HOH D 19 119 124 HOH HOH . 
CA 7 HOH D 20 120 1 HOH HOH . 
CA 7 HOH D 21 121 121 HOH HOH . 
CA 7 HOH D 22 122 46 HOH HOH . 
CA 7 HOH D 23 123 67 HOH HOH . 
CA 7 HOH D 24 124 47 HOH HOH . 
CA 7 HOH D 25 125 26 HOH HOH . 
CA 7 HOH D 26 126 8 HOH HOH . 
CA 7 HOH D 27 127 62 HOH HOH . 
CA 7 HOH D 28 128 137 HOH HOH . 
CA 7 HOH D 29 129 18 HOH HOH . 
CA 7 HOH D 30 130 14 HOH HOH . 
CA 7 HOH D 31 131 139 HOH HOH . 
CA 7 HOH D 32 132 132 HOH HOH . 
CA 7 HOH D 33 133 111 HOH HOH . 
CA 7 HOH D 34 134 16 HOH HOH . 
CA 7 HOH D 35 135 129 HOH HOH . 
CA 7 HOH D 36 136 98 HOH HOH . 
CA 7 HOH D 37 137 58 HOH HOH . 
CA 7 HOH D 38 138 76 HOH HOH . 
CA 7 HOH D 39 139 138 HOH HOH . 
CA 7 HOH D 40 140 96 HOH HOH . 
CA 7 HOH D 41 141 127 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 MPG . . . V 6 37.749 32.814 50.509 1 51.05 ? C2 MPG 320 A 1 
HETATM 2 C C3 MPG . . . V 6 36.887 32.884 49.252 1 47.93 ? C3 MPG 320 A 1 
HETATM 3 C C4 MPG . . . V 6 36.136 34.213 49.213 1 41.94 ? C4 MPG 320 A 1 
HETATM 4 C C5 MPG . . . V 6 35.456 34.35 47.853 1 51.26 ? C5 MPG 320 A 1 
HETATM 5 C C6 MPG . . . V 6 34.421 35.47 47.902 1 40.63 ? C6 MPG 320 A 1 
HETATM 6 C C7 MPG . . . V 6 33.609 35.463 46.607 1 70.05 ? C7 MPG 320 A 1 
HETATM 7 C C8 MPG . . . V 6 32.533 36.542 46.671 1 55 ? C8 MPG 320 A 1 
HETATM 8 C C9 MPG . . . V 6 31.494 36.275 45.58 1 55.23 ? C9 MPG 320 A 1 
HETATM 9 C C10 MPG . . . V 6 31.28 37.063 44.543 1 59.08 ? C10 MPG 320 A 1 
HETATM 10 C C11 MPG . . . V 6 32.044 38.365 44.296 1 60.51 ? C11 MPG 320 A 1 
HETATM 11 C C12 MPG . . . V 6 32.137 38.616 42.792 1 53.3 ? C12 MPG 320 A 1 
HETATM 12 O O1 MPG . . . V 6 38.231 31.213 52.206 1 68.04 ? O1 MPG 320 A 1 
HETATM 13 C C1 MPG . . . V 6 38.145 31.369 50.818 1 56.26 ? C1 MPG 320 A 1 
HETATM 14 C CXD MPG . . . V 6 38.442 29.5 54.062 1 77.48 ? CXD MPG 320 A 1 
HETATM 15 O O2 MPG . . . V 6 39.56 28.807 54.542 1 72.49 ? O2 MPG 320 A 1 
HETATM 16 C C21 MPG . . . V 6 37.224 28.58 54.08 1 89.45 ? C21 MPG 320 A 1 
HETATM 17 O O3 MPG . . . V 6 36.242 29.088 53.218 1 82.32 ? O3 MPG 320 A 1 
HETATM 18 O O4 MPG . . . V 6 39.279 29.259 51.873 1 66.51 ? O4 MPG 320 A 1 
HETATM 19 C CX3 MPG . . . V 6 38.696 29.962 52.628 1 67.29 ? CX3 MPG 320 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           384 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           19 
#