data_5V80 # _model_server_result.job_id -5CdKA7ViTWJoauhJ6iCPQ _model_server_result.datetime_utc '2024-10-17 07:33:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5v80 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5V80 # _exptl.entry_id 5V80 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5V80 _cell.length_a 97.669 _cell.length_b 97.669 _cell.length_c 80.579 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V80 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 317 n n P O2 PO4 sing 318 n n P O3 PO4 sing 319 n n P O4 PO4 sing 320 n n # _atom_sites.entry_id 5V80 _atom_sites.fract_transf_matrix[1][1] 0.010239 _atom_sites.fract_transf_matrix[1][2] 0.005911 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011823 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01241 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 401 1 PO4 PO4 . C 3 971 A 1 402 1 971 ZZZ . D 4 HOH A 1 501 48 HOH HOH . D 4 HOH A 2 502 42 HOH HOH . D 4 HOH A 3 503 56 HOH HOH . D 4 HOH A 4 504 62 HOH HOH . D 4 HOH A 5 505 17 HOH HOH . D 4 HOH A 6 506 66 HOH HOH . D 4 HOH A 7 507 78 HOH HOH . D 4 HOH A 8 508 36 HOH HOH . D 4 HOH A 9 509 71 HOH HOH . D 4 HOH A 10 510 67 HOH HOH . D 4 HOH A 11 511 5 HOH HOH . D 4 HOH A 12 512 68 HOH HOH . D 4 HOH A 13 513 22 HOH HOH . D 4 HOH A 14 514 19 HOH HOH . D 4 HOH A 15 515 6 HOH HOH . D 4 HOH A 16 516 34 HOH HOH . D 4 HOH A 17 517 65 HOH HOH . D 4 HOH A 18 518 37 HOH HOH . D 4 HOH A 19 519 69 HOH HOH . D 4 HOH A 20 520 12 HOH HOH . D 4 HOH A 21 521 35 HOH HOH . D 4 HOH A 22 522 57 HOH HOH . D 4 HOH A 23 523 75 HOH HOH . D 4 HOH A 24 524 54 HOH HOH . D 4 HOH A 25 525 28 HOH HOH . D 4 HOH A 26 526 73 HOH HOH . D 4 HOH A 27 527 60 HOH HOH . D 4 HOH A 28 528 31 HOH HOH . D 4 HOH A 29 529 4 HOH HOH . D 4 HOH A 30 530 1 HOH HOH . D 4 HOH A 31 531 58 HOH HOH . D 4 HOH A 32 532 2 HOH HOH . D 4 HOH A 33 533 39 HOH HOH . D 4 HOH A 34 534 25 HOH HOH . D 4 HOH A 35 535 47 HOH HOH . D 4 HOH A 36 536 9 HOH HOH . D 4 HOH A 37 537 3 HOH HOH . D 4 HOH A 38 538 16 HOH HOH . D 4 HOH A 39 539 13 HOH HOH . D 4 HOH A 40 540 38 HOH HOH . D 4 HOH A 41 541 45 HOH HOH . D 4 HOH A 42 542 14 HOH HOH . D 4 HOH A 43 543 23 HOH HOH . D 4 HOH A 44 544 30 HOH HOH . D 4 HOH A 45 545 18 HOH HOH . D 4 HOH A 46 546 33 HOH HOH . D 4 HOH A 47 547 10 HOH HOH . D 4 HOH A 48 548 43 HOH HOH . D 4 HOH A 49 549 27 HOH HOH . D 4 HOH A 50 550 44 HOH HOH . D 4 HOH A 51 551 40 HOH HOH . D 4 HOH A 52 552 26 HOH HOH . D 4 HOH A 53 553 7 HOH HOH . D 4 HOH A 54 554 50 HOH HOH . D 4 HOH A 55 555 49 HOH HOH . D 4 HOH A 56 556 74 HOH HOH . D 4 HOH A 57 557 15 HOH HOH . D 4 HOH A 58 558 46 HOH HOH . D 4 HOH A 59 559 52 HOH HOH . D 4 HOH A 60 560 72 HOH HOH . D 4 HOH A 61 561 20 HOH HOH . D 4 HOH A 62 562 41 HOH HOH . D 4 HOH A 63 563 21 HOH HOH . D 4 HOH A 64 564 8 HOH HOH . D 4 HOH A 65 565 64 HOH HOH . D 4 HOH A 66 566 63 HOH HOH . D 4 HOH A 67 567 61 HOH HOH . D 4 HOH A 68 568 32 HOH HOH . D 4 HOH A 69 569 51 HOH HOH . D 4 HOH A 70 570 24 HOH HOH . D 4 HOH A 71 571 11 HOH HOH . D 4 HOH A 72 572 76 HOH HOH . D 4 HOH A 73 573 29 HOH HOH . D 4 HOH A 74 574 70 HOH HOH . D 4 HOH A 75 575 53 HOH HOH . D 4 HOH A 76 576 59 HOH HOH . D 4 HOH A 77 577 55 HOH HOH . D 4 HOH A 78 578 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 42.248 22.381 11.902 1 63.4 ? P PO4 401 A 1 HETATM 2 O O1 PO4 . . . B 2 43.18 22.48 10.705 1 49.29 ? O1 PO4 401 A 1 HETATM 3 O O2 PO4 . . . B 2 41.34 23.59 11.937 1 47.85 ? O2 PO4 401 A 1 HETATM 4 O O3 PO4 . . . B 2 41.438 21.103 11.829 1 62.42 ? O3 PO4 401 A 1 HETATM 5 O O4 PO4 . . . B 2 43.042 22.376 13.184 1 71.08 ? O4 PO4 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #