data_5V80
#
_model_server_result.job_id            fKIT3nJXibyPAHE_DIjzFQ 
_model_server_result.datetime_utc      '2024-10-17 07:24:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5v80 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    5V80 
#
_exptl.entry_id    5V80 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              392.458 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-methyl-4-{3-[6-(piperazin-1-yl)pyridin-2-yl]-1H-pyrazolo[3,4-c]pyridin-5-yl}piperazin-2-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5V80 
_cell.length_a            97.669 
_cell.length_b            97.669 
_cell.length_c            80.579 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5V80 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H24 N8 O' 
_chem_comp.formula_weight    392.458 
_chem_comp.id                971 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-methyl-4-{3-[6-(piperazin-1-yl)pyridin-2-yl]-1H-pyrazolo[3,4-c]pyridin-5-yl}piperazin-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Cpd1 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C29 N28 971 sing 1 n n 
C29 C30 971 sing 2 n n 
N28 C27 971 sing 3 n n 
C30 N25 971 sing 4 n n 
C27 C26 971 sing 5 n n 
N25 C26 971 sing 6 n n 
N25 C23 971 sing 7 n n 
C22 C23 971 doub 8 n y 
C22 C21 971 sing 9 n y 
C23 N24 971 sing 10 n y 
C21 C20 971 doub 11 n y 
N24 C19 971 doub 12 n y 
C3 C4 971 sing 13 n n 
C3 N2 971 sing 14 n n 
C1 N2 971 sing 15 n n 
C4 N5 971 sing 16 n n 
C20 C19 971 sing 17 n y 
N2 C7 971 sing 18 n n 
C19 C18 971 sing 19 n n 
C10 C9 971 doub 20 n y 
C10 C11 971 sing 21 n y 
N5 C9 971 sing 22 n n 
N5 C6 971 sing 23 n n 
C7 C6 971 sing 24 n n 
C7 O8 971 doub 25 n n 
C18 C11 971 sing 26 n y 
C18 N17 971 doub 27 n y 
C9 N14 971 sing 28 n y 
C11 C12 971 doub 29 n y 
N17 N15 971 sing 30 n y 
N14 C13 971 doub 31 n y 
C12 N15 971 sing 32 n y 
C12 C13 971 sing 33 n y 
C10 H1 971 sing 34 n n 
C4 H2 971 sing 35 n n 
C4 H3 971 sing 36 n n 
C6 H4 971 sing 37 n n 
C6 H5 971 sing 38 n n 
C1 H6 971 sing 39 n n 
C1 H7 971 sing 40 n n 
C1 H8 971 sing 41 n n 
C3 H9 971 sing 42 n n 
C3 H10 971 sing 43 n n 
C13 H11 971 sing 44 n n 
N15 H16 971 sing 45 n n 
C20 H12 971 sing 46 n n 
C21 H13 971 sing 47 n n 
C22 H14 971 sing 48 n n 
C26 H15 971 sing 49 n n 
C26 H17 971 sing 50 n n 
C27 H18 971 sing 51 n n 
C27 H19 971 sing 52 n n 
N28 H20 971 sing 53 n n 
C29 H22 971 sing 54 n n 
C29 H23 971 sing 55 n n 
C30 H24 971 sing 56 n n 
C30 H25 971 sing 57 n n 
#
_atom_sites.entry_id                     5V80 
_atom_sites.fract_transf_matrix[1][1]    0.010239 
_atom_sites.fract_transf_matrix[1][2]    0.005911 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011823 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01241 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PO4 A 1 401 1 PO4 PO4 . 
C 3 971 A 1 402 1 971 ZZZ . 
D 4 HOH A 1 501 48 HOH HOH . 
D 4 HOH A 2 502 42 HOH HOH . 
D 4 HOH A 3 503 56 HOH HOH . 
D 4 HOH A 4 504 62 HOH HOH . 
D 4 HOH A 5 505 17 HOH HOH . 
D 4 HOH A 6 506 66 HOH HOH . 
D 4 HOH A 7 507 78 HOH HOH . 
D 4 HOH A 8 508 36 HOH HOH . 
D 4 HOH A 9 509 71 HOH HOH . 
D 4 HOH A 10 510 67 HOH HOH . 
D 4 HOH A 11 511 5 HOH HOH . 
D 4 HOH A 12 512 68 HOH HOH . 
D 4 HOH A 13 513 22 HOH HOH . 
D 4 HOH A 14 514 19 HOH HOH . 
D 4 HOH A 15 515 6 HOH HOH . 
D 4 HOH A 16 516 34 HOH HOH . 
D 4 HOH A 17 517 65 HOH HOH . 
D 4 HOH A 18 518 37 HOH HOH . 
D 4 HOH A 19 519 69 HOH HOH . 
D 4 HOH A 20 520 12 HOH HOH . 
D 4 HOH A 21 521 35 HOH HOH . 
D 4 HOH A 22 522 57 HOH HOH . 
D 4 HOH A 23 523 75 HOH HOH . 
D 4 HOH A 24 524 54 HOH HOH . 
D 4 HOH A 25 525 28 HOH HOH . 
D 4 HOH A 26 526 73 HOH HOH . 
D 4 HOH A 27 527 60 HOH HOH . 
D 4 HOH A 28 528 31 HOH HOH . 
D 4 HOH A 29 529 4 HOH HOH . 
D 4 HOH A 30 530 1 HOH HOH . 
D 4 HOH A 31 531 58 HOH HOH . 
D 4 HOH A 32 532 2 HOH HOH . 
D 4 HOH A 33 533 39 HOH HOH . 
D 4 HOH A 34 534 25 HOH HOH . 
D 4 HOH A 35 535 47 HOH HOH . 
D 4 HOH A 36 536 9 HOH HOH . 
D 4 HOH A 37 537 3 HOH HOH . 
D 4 HOH A 38 538 16 HOH HOH . 
D 4 HOH A 39 539 13 HOH HOH . 
D 4 HOH A 40 540 38 HOH HOH . 
D 4 HOH A 41 541 45 HOH HOH . 
D 4 HOH A 42 542 14 HOH HOH . 
D 4 HOH A 43 543 23 HOH HOH . 
D 4 HOH A 44 544 30 HOH HOH . 
D 4 HOH A 45 545 18 HOH HOH . 
D 4 HOH A 46 546 33 HOH HOH . 
D 4 HOH A 47 547 10 HOH HOH . 
D 4 HOH A 48 548 43 HOH HOH . 
D 4 HOH A 49 549 27 HOH HOH . 
D 4 HOH A 50 550 44 HOH HOH . 
D 4 HOH A 51 551 40 HOH HOH . 
D 4 HOH A 52 552 26 HOH HOH . 
D 4 HOH A 53 553 7 HOH HOH . 
D 4 HOH A 54 554 50 HOH HOH . 
D 4 HOH A 55 555 49 HOH HOH . 
D 4 HOH A 56 556 74 HOH HOH . 
D 4 HOH A 57 557 15 HOH HOH . 
D 4 HOH A 58 558 46 HOH HOH . 
D 4 HOH A 59 559 52 HOH HOH . 
D 4 HOH A 60 560 72 HOH HOH . 
D 4 HOH A 61 561 20 HOH HOH . 
D 4 HOH A 62 562 41 HOH HOH . 
D 4 HOH A 63 563 21 HOH HOH . 
D 4 HOH A 64 564 8 HOH HOH . 
D 4 HOH A 65 565 64 HOH HOH . 
D 4 HOH A 66 566 63 HOH HOH . 
D 4 HOH A 67 567 61 HOH HOH . 
D 4 HOH A 68 568 32 HOH HOH . 
D 4 HOH A 69 569 51 HOH HOH . 
D 4 HOH A 70 570 24 HOH HOH . 
D 4 HOH A 71 571 11 HOH HOH . 
D 4 HOH A 72 572 76 HOH HOH . 
D 4 HOH A 73 573 29 HOH HOH . 
D 4 HOH A 74 574 70 HOH HOH . 
D 4 HOH A 75 575 53 HOH HOH . 
D 4 HOH A 76 576 59 HOH HOH . 
D 4 HOH A 77 577 55 HOH HOH . 
D 4 HOH A 78 578 77 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C7 971 . . . C 3 21.348 31.024 0.072 1 52.35 ? C7 971 402 A 1 
HETATM 2 C C9 971 . . . C 3 22.402 34.32 0.52 1 37.46 ? C9 971 402 A 1 
HETATM 3 N N2 971 . . . C 3 21.862 30.835 -1.124 1 51.85 ? N2 971 402 A 1 
HETATM 4 C C10 971 . . . C 3 22.696 35.437 -0.174 1 33.87 ? C10 971 402 A 1 
HETATM 5 C C4 971 . . . C 3 21.777 33.228 -1.515 1 48.43 ? C4 971 402 A 1 
HETATM 6 N N5 971 . . . C 3 22.069 33.183 -0.109 1 44.48 ? N5 971 402 A 1 
HETATM 7 C C6 971 . . . C 3 21.147 32.374 0.619 1 50.28 ? C6 971 402 A 1 
HETATM 8 C C1 971 . . . C 3 22.036 29.477 -1.577 1 60.13 ? C1 971 402 A 1 
HETATM 9 C C3 971 . . . C 3 22.26 31.89 -2.029 1 47.32 ? C3 971 402 A 1 
HETATM 10 O O8 971 . . . C 3 21.051 30.105 0.75 1 50.67 ? O8 971 402 A 1 
HETATM 11 C C11 971 . . . C 3 23.051 36.538 0.565 1 28.09 ? C11 971 402 A 1 
HETATM 12 C C12 971 . . . C 3 23.089 36.455 1.939 1 28.78 ? C12 971 402 A 1 
HETATM 13 C C13 971 . . . C 3 22.771 35.275 2.532 1 32.19 ? C13 971 402 A 1 
HETATM 14 N N14 971 . . . C 3 22.455 34.263 1.811 1 38.09 ? N14 971 402 A 1 
HETATM 15 N N15 971 . . . C 3 23.456 37.65 2.399 1 34.83 ? N15 971 402 A 1 
HETATM 16 N N17 971 . . . C 3 23.676 38.486 1.359 1 33.95 ? N17 971 402 A 1 
HETATM 17 C C18 971 . . . C 3 23.436 37.877 0.262 1 32.04 ? C18 971 402 A 1 
HETATM 18 C C19 971 . . . C 3 23.56 38.485 -1.055 1 34.69 ? C19 971 402 A 1 
HETATM 19 C C20 971 . . . C 3 23.886 39.802 -1.137 1 40.78 ? C20 971 402 A 1 
HETATM 20 C C21 971 . . . C 3 24 40.402 -2.346 1 46.11 ? C21 971 402 A 1 
HETATM 21 C C22 971 . . . C 3 23.756 39.643 -3.448 1 49.92 ? C22 971 402 A 1 
HETATM 22 C C23 971 . . . C 3 23.432 38.333 -3.275 1 48.93 ? C23 971 402 A 1 
HETATM 23 N N24 971 . . . C 3 23.332 37.792 -2.117 1 43.02 ? N24 971 402 A 1 
HETATM 24 N N25 971 . . . C 3 23.172 37.546 -4.341 1 55.16 ? N25 971 402 A 1 
HETATM 25 C C26 971 . . . C 3 23.436 36.174 -4.034 1 58.83 ? C26 971 402 A 1 
HETATM 26 C C27 971 . . . C 3 22.856 35.343 -5.152 1 66.96 ? C27 971 402 A 1 
HETATM 27 N N28 971 . . . C 3 23.572 35.732 -6.349 1 66.73 ? N28 971 402 A 1 
HETATM 28 C C29 971 . . . C 3 23.255 37.112 -6.656 1 62.6 ? C29 971 402 A 1 
HETATM 29 C C30 971 . . . C 3 23.828 37.967 -5.549 1 59.95 ? C30 971 402 A 1 
HETATM 30 H H16 971 . . . C 3 23.571 37.876 3.331 1 41.79 ? H16 971 402 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           30 
#