data_5V8O # _model_server_result.job_id 1TE2cQEF1qV_H6OqMIn5vA _model_server_result.datetime_utc '2024-10-28 11:36:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5v8o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":602}' # _entry.id 5V8O # _exptl.entry_id 5V8O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 213.195 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-phenyltetrazolo[1,5-a]pyrimidin-7-ol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.65 _cell.angle_gamma 90 _cell.entry_id 5V8O _cell.length_a 216.729 _cell.length_b 48.06 _cell.length_c 89.488 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V8O _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 230 A HIS 390 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc2 A SG CYS 236 A CYS 396 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc3 A SG CYS 237 A CYS 397 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc4 A SG CYS 244 A CYS 404 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc5 B NE2 HIS 230 B HIS 390 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc6 B SG CYS 236 B CYS 396 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc7 B SG CYS 237 B CYS 397 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc8 B SG CYS 244 B CYS 404 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? # _chem_comp.formula 'C10 H7 N5 O' _chem_comp.formula_weight 213.195 _chem_comp.id 8ZM _chem_comp.mon_nstd_flag . _chem_comp.name 5-phenyltetrazolo[1,5-a]pyrimidin-7-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O16 C9 8ZM sing 1 n n C6 C5 8ZM doub 2 n y C6 C1 8ZM sing 3 n y C5 C4 8ZM sing 4 n y C8 C9 8ZM doub 5 n y C8 C7 8ZM sing 6 n y C9 N10 8ZM sing 7 n y C1 C2 8ZM doub 8 n y C4 C7 8ZM sing 9 n n C4 C3 8ZM doub 10 n y C7 N12 8ZM doub 11 n y N10 N15 8ZM sing 12 n y N10 C11 8ZM sing 13 n y C2 C3 8ZM sing 14 n y N15 N14 8ZM doub 15 n y N12 C11 8ZM sing 16 n y C11 N13 8ZM doub 17 n y N14 N13 8ZM sing 18 n y C6 HC6 8ZM sing 19 n n C8 HC8 8ZM sing 20 n n C1 HC1 8ZM sing 21 n n C2 HC2 8ZM sing 22 n n C3 HC3 8ZM sing 23 n n C5 HC5 8ZM sing 24 n n O16 HO16 8ZM sing 25 n n # _atom_sites.entry_id 5V8O _atom_sites.fract_transf_matrix[1][1] 0.004614 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001739 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020807 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011942 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 601 601 ZN ZN . D 3 8ZM A 1 602 1 8ZM PFE . E 2 ZN B 1 601 601 ZN ZN . F 3 8ZM B 1 602 1 8ZM PFE . G 3 8ZM B 1 603 1 8ZM PFE . H 4 HOH A 1 701 25 HOH HOH . H 4 HOH A 2 702 3 HOH HOH . H 4 HOH A 3 703 10 HOH HOH . H 4 HOH A 4 704 9 HOH HOH . H 4 HOH A 5 705 12 HOH HOH . H 4 HOH A 6 706 16 HOH HOH . H 4 HOH A 7 707 4 HOH HOH . H 4 HOH A 8 708 7 HOH HOH . H 4 HOH A 9 709 27 HOH HOH . H 4 HOH A 10 710 17 HOH HOH . H 4 HOH A 11 711 19 HOH HOH . H 4 HOH A 12 712 20 HOH HOH . H 4 HOH A 13 713 21 HOH HOH . H 4 HOH A 14 714 8 HOH HOH . I 4 HOH B 1 701 2 HOH HOH . I 4 HOH B 2 702 6 HOH HOH . I 4 HOH B 3 703 22 HOH HOH . I 4 HOH B 4 704 1 HOH HOH . I 4 HOH B 5 705 24 HOH HOH . I 4 HOH B 6 706 15 HOH HOH . I 4 HOH B 7 707 18 HOH HOH . I 4 HOH B 8 708 26 HOH HOH . I 4 HOH B 9 709 14 HOH HOH . I 4 HOH B 10 710 23 HOH HOH . I 4 HOH B 11 711 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 8ZM . . . F 3 44.848 -18.742 -63.489 1 104.8 ? C4 8ZM 602 B 1 HETATM 2 C C7 8ZM . . . F 3 44.843 -17.276 -63.648 1 102.92 ? C7 8ZM 602 B 1 HETATM 3 C C6 8ZM . . . F 3 44.49 -20.707 -62.124 1 107.45 ? C6 8ZM 602 B 1 HETATM 4 C C9 8ZM . . . F 3 44.346 -15.047 -62.778 1 103.04 ? C9 8ZM 602 B 1 HETATM 5 C C8 8ZM . . . F 3 44.422 -16.412 -62.575 1 103.5 ? C8 8ZM 602 B 1 HETATM 6 C C1 8ZM . . . F 3 44.989 -21.51 -63.135 1 106.85 ? C1 8ZM 602 B 1 HETATM 7 C C2 8ZM . . . F 3 45.391 -20.941 -64.332 1 106 ? C2 8ZM 602 B 1 HETATM 8 C C3 8ZM . . . F 3 45.312 -19.568 -64.516 1 105.06 ? C3 8ZM 602 B 1 HETATM 9 C C5 8ZM . . . F 3 44.416 -19.333 -62.296 1 106.32 ? C5 8ZM 602 B 1 HETATM 10 N N10 8ZM . . . F 3 44.694 -14.583 -64.082 1 100.76 ? N10 8ZM 602 B 1 HETATM 11 C C11 8ZM . . . F 3 45.09 -15.467 -65.064 1 99.9 ? C11 8ZM 602 B 1 HETATM 12 N N12 8ZM . . . F 3 45.175 -16.8 -64.848 1 99.74 ? N12 8ZM 602 B 1 HETATM 13 N N13 8ZM . . . F 3 45.324 -14.777 -66.166 1 100.11 ? N13 8ZM 602 B 1 HETATM 14 N N14 8ZM . . . F 3 45.069 -13.476 -65.85 1 100.61 ? N14 8ZM 602 B 1 HETATM 15 N N15 8ZM . . . F 3 44.698 -13.33 -64.614 1 100.05 ? N15 8ZM 602 B 1 HETATM 16 O O16 8ZM . . . F 3 43.994 -14.109 -61.903 1 104.15 ? O16 8ZM 602 B 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #