data_5V8P
#
_model_server_result.job_id            VDI21sQc0aTv7oAzrx_nyA 
_model_server_result.datetime_utc      '2024-11-09 01:27:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5v8p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    5V8P 
#
_exptl.entry_id    5V8P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              267.735 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[3-(4-chlorophenyl)-1H-pyrazol-5-yl]-2-sulfanylacetamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.6 
_cell.angle_gamma         90 
_cell.entry_id            5V8P 
_cell.length_a            73.172 
_cell.length_b            67.327 
_cell.length_c            98.14 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5V8P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 243 A HIS 223 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc2 A NE2 HIS 247 A HIS 227 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? 
metalc ? metalc3 A OE1 GLU 282 A GLU 262 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc4 C ZN ZN . A ZN 501 1_555 D S17 90G . A 90G 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc5 B NE2 HIS 243 B HIS 223 1_555 F ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc6 B NE2 HIS 247 B HIS 227 1_555 F ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? 
metalc ? metalc7 B OE1 GLU 282 B GLU 262 1_555 F ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
metalc ? metalc8 B OE2 GLU 282 B GLU 262 1_555 F ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? 
metalc ? metalc9 E S17 90G . B 90G 501 1_555 F ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
#
_chem_comp.formula           'C11 H10 Cl N3 O S' 
_chem_comp.formula_weight    267.735 
_chem_comp.id                90G 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[3-(4-chlorophenyl)-1H-pyrazol-5-yl]-2-sulfanylacetamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S17 C16 90G sing 1 n n 
C16 C14 90G sing 2 n n 
N13 C14 90G sing 3 n n 
N13 C10 90G sing 4 n n 
N11 C10 90G sing 5 n y 
N11 N12 90G sing 6 n y 
C14 O15 90G doub 7 n n 
C10 C9 90G doub 8 n y 
N12 C8 90G doub 9 n y 
C9 C8 90G sing 10 n y 
C8 C3 90G sing 11 n n 
C4 C3 90G doub 12 n y 
C4 C5 90G sing 13 n y 
C3 C2 90G sing 14 n y 
C5 C6 90G doub 15 n y 
C2 C1 90G doub 16 n y 
C6 C1 90G sing 17 n y 
C6 CL0 90G sing 18 n n 
C16 H1 90G sing 19 n n 
C16 H2 90G sing 20 n n 
S17 H3 90G sing 21 n n 
N13 H4 90G sing 22 n n 
C9 H5 90G sing 23 n n 
N11 H6 90G sing 24 n n 
C2 H7 90G sing 25 n n 
C4 H8 90G sing 26 n n 
C5 H9 90G sing 27 n n 
C1 H10 90G sing 28 n n 
#
_atom_sites.entry_id                     5V8P 
_atom_sites.fract_transf_matrix[1][1]    0.013666 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003817 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014853 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010579 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 501 500 ZN ZN . 
D 3 90G A 1 502 600 90G 143 . 
E 3 90G B 1 501 600 90G 143 . 
F 2 ZN B 1 502 500 ZN ZN . 
G 4 HOH A 1 601 92 HOH HOH . 
G 4 HOH A 2 602 52 HOH HOH . 
G 4 HOH A 3 603 84 HOH HOH . 
G 4 HOH A 4 604 70 HOH HOH . 
G 4 HOH A 5 605 48 HOH HOH . 
G 4 HOH A 6 606 3 HOH HOH . 
G 4 HOH A 7 607 64 HOH HOH . 
G 4 HOH A 8 608 93 HOH HOH . 
G 4 HOH A 9 609 11 HOH HOH . 
G 4 HOH A 10 610 1 HOH HOH . 
G 4 HOH A 11 611 16 HOH HOH . 
G 4 HOH A 12 612 8 HOH HOH . 
G 4 HOH A 13 613 15 HOH HOH . 
G 4 HOH A 14 614 73 HOH HOH . 
G 4 HOH A 15 615 65 HOH HOH . 
G 4 HOH A 16 616 91 HOH HOH . 
G 4 HOH A 17 617 57 HOH HOH . 
G 4 HOH A 18 618 20 HOH HOH . 
G 4 HOH A 19 619 67 HOH HOH . 
G 4 HOH A 20 620 34 HOH HOH . 
G 4 HOH A 21 621 53 HOH HOH . 
G 4 HOH A 22 622 33 HOH HOH . 
G 4 HOH A 23 623 2 HOH HOH . 
G 4 HOH A 24 624 35 HOH HOH . 
G 4 HOH A 25 625 7 HOH HOH . 
G 4 HOH A 26 626 31 HOH HOH . 
G 4 HOH A 27 627 22 HOH HOH . 
G 4 HOH A 28 628 21 HOH HOH . 
G 4 HOH A 29 629 85 HOH HOH . 
G 4 HOH A 30 630 86 HOH HOH . 
G 4 HOH A 31 631 76 HOH HOH . 
G 4 HOH A 32 632 102 HOH HOH . 
G 4 HOH A 33 633 66 HOH HOH . 
G 4 HOH A 34 634 79 HOH HOH . 
G 4 HOH A 35 635 94 HOH HOH . 
G 4 HOH A 36 636 72 HOH HOH . 
G 4 HOH A 37 637 97 HOH HOH . 
G 4 HOH A 38 638 47 HOH HOH . 
G 4 HOH A 39 639 100 HOH HOH . 
G 4 HOH A 40 640 99 HOH HOH . 
H 4 HOH B 1 601 68 HOH HOH . 
H 4 HOH B 2 602 77 HOH HOH . 
H 4 HOH B 3 603 62 HOH HOH . 
H 4 HOH B 4 604 55 HOH HOH . 
H 4 HOH B 5 605 69 HOH HOH . 
H 4 HOH B 6 606 74 HOH HOH . 
H 4 HOH B 7 607 88 HOH HOH . 
H 4 HOH B 8 608 27 HOH HOH . 
H 4 HOH B 9 609 71 HOH HOH . 
H 4 HOH B 10 610 63 HOH HOH . 
H 4 HOH B 11 611 9 HOH HOH . 
H 4 HOH B 12 612 36 HOH HOH . 
H 4 HOH B 13 613 58 HOH HOH . 
H 4 HOH B 14 614 44 HOH HOH . 
H 4 HOH B 15 615 39 HOH HOH . 
H 4 HOH B 16 616 24 HOH HOH . 
H 4 HOH B 17 617 45 HOH HOH . 
H 4 HOH B 18 618 89 HOH HOH . 
H 4 HOH B 19 619 28 HOH HOH . 
H 4 HOH B 20 620 14 HOH HOH . 
H 4 HOH B 21 621 51 HOH HOH . 
H 4 HOH B 22 622 42 HOH HOH . 
H 4 HOH B 23 623 90 HOH HOH . 
H 4 HOH B 24 624 17 HOH HOH . 
H 4 HOH B 25 625 5 HOH HOH . 
H 4 HOH B 26 626 60 HOH HOH . 
H 4 HOH B 27 627 50 HOH HOH . 
H 4 HOH B 28 628 29 HOH HOH . 
H 4 HOH B 29 629 54 HOH HOH . 
H 4 HOH B 30 630 12 HOH HOH . 
H 4 HOH B 31 631 83 HOH HOH . 
H 4 HOH B 32 632 6 HOH HOH . 
H 4 HOH B 33 633 4 HOH HOH . 
H 4 HOH B 34 634 82 HOH HOH . 
H 4 HOH B 35 635 18 HOH HOH . 
H 4 HOH B 36 636 43 HOH HOH . 
H 4 HOH B 37 637 59 HOH HOH . 
H 4 HOH B 38 638 23 HOH HOH . 
H 4 HOH B 39 639 26 HOH HOH . 
H 4 HOH B 40 640 25 HOH HOH . 
H 4 HOH B 41 641 10 HOH HOH . 
H 4 HOH B 42 642 30 HOH HOH . 
H 4 HOH B 43 643 38 HOH HOH . 
H 4 HOH B 44 644 32 HOH HOH . 
H 4 HOH B 45 645 46 HOH HOH . 
H 4 HOH B 46 646 61 HOH HOH . 
H 4 HOH B 47 647 87 HOH HOH . 
H 4 HOH B 48 648 80 HOH HOH . 
H 4 HOH B 49 649 13 HOH HOH . 
H 4 HOH B 50 650 49 HOH HOH . 
H 4 HOH B 51 651 40 HOH HOH . 
H 4 HOH B 52 652 41 HOH HOH . 
H 4 HOH B 53 653 56 HOH HOH . 
H 4 HOH B 54 654 81 HOH HOH . 
H 4 HOH B 55 655 98 HOH HOH . 
H 4 HOH B 56 656 78 HOH HOH . 
H 4 HOH B 57 657 37 HOH HOH . 
H 4 HOH B 58 658 19 HOH HOH . 
H 4 HOH B 59 659 96 HOH HOH . 
H 4 HOH B 60 660 95 HOH HOH . 
H 4 HOH B 61 661 75 HOH HOH . 
H 4 HOH B 62 662 101 HOH HOH . 
H 4 HOH B 63 663 103 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O15 90G . . . D 3 4.797 -41.384 -21.327 1 79.02 ? O15 90G 502 A 1 
HETATM 2 C C14 90G . . . D 3 4.784 -41.344 -22.552 1 80.34 ? C14 90G 502 A 1 
HETATM 3 C C16 90G . . . D 3 5.109 -40.087 -23.32 1 78.34 ? C16 90G 502 A 1 
HETATM 4 S S17 90G . . . D 3 3.654 -39.015 -23.342 1 75.6 ? S17 90G 502 A 1 
HETATM 5 N N13 90G . . . D 3 4.475 -42.371 -23.323 1 81.78 ? N13 90G 502 A 1 
HETATM 6 C C10 90G . . . D 3 3.976 -43.495 -22.793 1 88.44 ? C10 90G 502 A 1 
HETATM 7 C C9 90G . . . D 3 4.264 -44.22 -21.656 1 85.81 ? C9 90G 502 A 1 
HETATM 8 N N11 90G . . . D 3 3.011 -44.065 -23.519 1 85.47 ? N11 90G 502 A 1 
HETATM 9 N N12 90G . . . D 3 2.63 -45.218 -22.817 1 85.91 ? N12 90G 502 A 1 
HETATM 10 C C8 90G . . . D 3 3.397 -45.306 -21.701 1 85.86 ? C8 90G 502 A 1 
HETATM 11 C C3 90G . . . D 3 3.313 -46.377 -20.675 1 90.21 ? C3 90G 502 A 1 
HETATM 12 C C2 90G . . . D 3 3.287 -46.041 -19.326 1 90.75 ? C2 90G 502 A 1 
HETATM 13 C C4 90G . . . D 3 3.294 -47.709 -21.067 1 90.62 ? C4 90G 502 A 1 
HETATM 14 C C5 90G . . . D 3 3.221 -48.712 -20.107 1 91.84 ? C5 90G 502 A 1 
HETATM 15 C C6 90G . . . D 3 3.182 -48.38 -18.753 1 92.76 ? C6 90G 502 A 1 
HETATM 16 CL CL0 90G . . . D 3 3.094 -49.671 -17.5 1 94.28 ? CL0 90G 502 A 1 
HETATM 17 C C1 90G . . . D 3 3.217 -47.042 -18.364 1 91.96 ? C1 90G 502 A 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           17 
#