data_5V95 # _model_server_result.job_id DUHTSogz5yHakLPfNU5N6g _model_server_result.datetime_utc '2024-12-01 03:21:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5v95 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 5V95 # _exptl.entry_id 5V95 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.35 _cell.angle_gamma 90 _cell.entry_id 5V95 _cell.length_a 46.152 _cell.length_b 118.199 _cell.length_c 61.47 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V95 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 63 A GLU 63 1_555 B MN MN . A MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc2 A O LEU 79 A LEU 79 1_555 D NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? metalc ? metalc3 A O ASN 208 A ASN 208 1_555 D NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc4 A NZ LYS 244 A LYS 244 1_555 C MN MN . A MN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc5 A NE2 HIS 264 A HIS 264 1_555 C MN MN . A MN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc6 A OD1 ASP 311 A ASP 311 1_555 C MN MN . A MN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc7 A NE2 HIS 502 A HIS 502 1_555 B MN MN . A MN 701 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc8 A OE2 GLU 607 A GLU 607 1_555 B MN MN . A MN 701 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc9 B MN MN . A MN 701 1_555 E O HOH . A HOH 843 2_646 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc10 B MN MN . A MN 701 1_555 E O HOH . A HOH 846 2_646 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc11 B MN MN . A MN 701 1_555 E O HOH . A HOH 881 2_646 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc12 C MN MN . A MN 702 1_555 E O HOH . A HOH 845 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc13 C MN MN . A MN 702 1_555 E O HOH . A HOH 913 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc14 C MN MN . A MN 702 1_555 E O HOH . A HOH 919 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc15 D NA NA . A NA 703 1_555 E O HOH . A HOH 825 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc16 D NA NA . A NA 703 1_555 E O HOH . A HOH 842 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc17 D NA NA . A NA 703 1_555 E O HOH . A HOH 896 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5V95 _atom_sites.fract_transf_matrix[1][1] 0.021668 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008469 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00846 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017467 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 701 900 MN MN . C 2 MN A 1 702 1000 MN MN . D 3 NA A 1 703 1100 NA NA . E 4 HOH A 1 801 77 HOH HOH . E 4 HOH A 2 802 44 HOH HOH . E 4 HOH A 3 803 133 HOH HOH . E 4 HOH A 4 804 94 HOH HOH . E 4 HOH A 5 805 43 HOH HOH . E 4 HOH A 6 806 136 HOH HOH . E 4 HOH A 7 807 42 HOH HOH . E 4 HOH A 8 808 110 HOH HOH . E 4 HOH A 9 809 95 HOH HOH . E 4 HOH A 10 810 11 HOH HOH . E 4 HOH A 11 811 74 HOH HOH . E 4 HOH A 12 812 82 HOH HOH . E 4 HOH A 13 813 101 HOH HOH . E 4 HOH A 14 814 57 HOH HOH . E 4 HOH A 15 815 80 HOH HOH . E 4 HOH A 16 816 86 HOH HOH . E 4 HOH A 17 817 59 HOH HOH . E 4 HOH A 18 818 79 HOH HOH . E 4 HOH A 19 819 36 HOH HOH . E 4 HOH A 20 820 49 HOH HOH . E 4 HOH A 21 821 16 HOH HOH . E 4 HOH A 22 822 100 HOH HOH . E 4 HOH A 23 823 50 HOH HOH . E 4 HOH A 24 824 76 HOH HOH . E 4 HOH A 25 825 60 HOH HOH . E 4 HOH A 26 826 120 HOH HOH . E 4 HOH A 27 827 125 HOH HOH . E 4 HOH A 28 828 30 HOH HOH . E 4 HOH A 29 829 48 HOH HOH . E 4 HOH A 30 830 64 HOH HOH . E 4 HOH A 31 831 129 HOH HOH . E 4 HOH A 32 832 29 HOH HOH . E 4 HOH A 33 833 99 HOH HOH . E 4 HOH A 34 834 91 HOH HOH . E 4 HOH A 35 835 89 HOH HOH . E 4 HOH A 36 836 10 HOH HOH . E 4 HOH A 37 837 122 HOH HOH . E 4 HOH A 38 838 85 HOH HOH . E 4 HOH A 39 839 3 HOH HOH . E 4 HOH A 40 840 14 HOH HOH . E 4 HOH A 41 841 88 HOH HOH . E 4 HOH A 42 842 12 HOH HOH . E 4 HOH A 43 843 4 HOH HOH . E 4 HOH A 44 844 98 HOH HOH . E 4 HOH A 45 845 5 HOH HOH . E 4 HOH A 46 846 1 HOH HOH . E 4 HOH A 47 847 31 HOH HOH . E 4 HOH A 48 848 53 HOH HOH . E 4 HOH A 49 849 27 HOH HOH . E 4 HOH A 50 850 84 HOH HOH . E 4 HOH A 51 851 109 HOH HOH . E 4 HOH A 52 852 108 HOH HOH . E 4 HOH A 53 853 33 HOH HOH . E 4 HOH A 54 854 105 HOH HOH . E 4 HOH A 55 855 47 HOH HOH . E 4 HOH A 56 856 93 HOH HOH . E 4 HOH A 57 857 119 HOH HOH . E 4 HOH A 58 858 123 HOH HOH . E 4 HOH A 59 859 106 HOH HOH . E 4 HOH A 60 860 114 HOH HOH . E 4 HOH A 61 861 28 HOH HOH . E 4 HOH A 62 862 66 HOH HOH . E 4 HOH A 63 863 73 HOH HOH . E 4 HOH A 64 864 23 HOH HOH . E 4 HOH A 65 865 134 HOH HOH . E 4 HOH A 66 866 111 HOH HOH . E 4 HOH A 67 867 63 HOH HOH . E 4 HOH A 68 868 72 HOH HOH . E 4 HOH A 69 869 127 HOH HOH . E 4 HOH A 70 870 65 HOH HOH . E 4 HOH A 71 871 45 HOH HOH . E 4 HOH A 72 872 25 HOH HOH . E 4 HOH A 73 873 71 HOH HOH . E 4 HOH A 74 874 117 HOH HOH . E 4 HOH A 75 875 78 HOH HOH . E 4 HOH A 76 876 115 HOH HOH . E 4 HOH A 77 877 18 HOH HOH . E 4 HOH A 78 878 97 HOH HOH . E 4 HOH A 79 879 112 HOH HOH . E 4 HOH A 80 880 67 HOH HOH . E 4 HOH A 81 881 2 HOH HOH . E 4 HOH A 82 882 116 HOH HOH . E 4 HOH A 83 883 107 HOH HOH . E 4 HOH A 84 884 121 HOH HOH . E 4 HOH A 85 885 61 HOH HOH . E 4 HOH A 86 886 39 HOH HOH . E 4 HOH A 87 887 9 HOH HOH . E 4 HOH A 88 888 17 HOH HOH . E 4 HOH A 89 889 21 HOH HOH . E 4 HOH A 90 890 90 HOH HOH . E 4 HOH A 91 891 19 HOH HOH . E 4 HOH A 92 892 131 HOH HOH . E 4 HOH A 93 893 92 HOH HOH . E 4 HOH A 94 894 46 HOH HOH . E 4 HOH A 95 895 32 HOH HOH . E 4 HOH A 96 896 126 HOH HOH . E 4 HOH A 97 897 138 HOH HOH . E 4 HOH A 98 898 54 HOH HOH . E 4 HOH A 99 899 137 HOH HOH . E 4 HOH A 100 900 40 HOH HOH . E 4 HOH A 101 901 22 HOH HOH . E 4 HOH A 102 902 128 HOH HOH . E 4 HOH A 103 903 130 HOH HOH . E 4 HOH A 104 904 75 HOH HOH . E 4 HOH A 105 905 113 HOH HOH . E 4 HOH A 106 906 102 HOH HOH . E 4 HOH A 107 907 51 HOH HOH . E 4 HOH A 108 908 56 HOH HOH . E 4 HOH A 109 909 83 HOH HOH . E 4 HOH A 110 910 37 HOH HOH . E 4 HOH A 111 911 62 HOH HOH . E 4 HOH A 112 912 58 HOH HOH . E 4 HOH A 113 913 6 HOH HOH . E 4 HOH A 114 914 8 HOH HOH . E 4 HOH A 115 915 20 HOH HOH . E 4 HOH A 116 916 87 HOH HOH . E 4 HOH A 117 917 104 HOH HOH . E 4 HOH A 118 918 24 HOH HOH . E 4 HOH A 119 919 7 HOH HOH . E 4 HOH A 120 920 38 HOH HOH . E 4 HOH A 121 921 103 HOH HOH . E 4 HOH A 122 922 132 HOH HOH . E 4 HOH A 123 923 124 HOH HOH . E 4 HOH A 124 924 26 HOH HOH . E 4 HOH A 125 925 69 HOH HOH . E 4 HOH A 126 926 118 HOH HOH . E 4 HOH A 127 927 135 HOH HOH . E 4 HOH A 128 928 96 HOH HOH . E 4 HOH A 129 929 35 HOH HOH . E 4 HOH A 130 930 41 HOH HOH . E 4 HOH A 131 931 52 HOH HOH . E 4 HOH A 132 932 70 HOH HOH . E 4 HOH A 133 933 55 HOH HOH . E 4 HOH A 134 934 68 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 7.902 _atom_site.Cartn_y -30.914 _atom_site.Cartn_z 32.732 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.09 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 701 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #