data_5V9U # _model_server_result.job_id cdP3ByGcawjHkzVOIWwgOA _model_server_result.datetime_utc '2024-10-15 12:16:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5v9u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":207}' # _entry.id 5V9U # _exptl.entry_id 5V9U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 77.48 _cell.angle_beta 81.97 _cell.angle_gamma 77.2 _cell.entry_id 5V9U _cell.length_a 33.44 _cell.length_b 39.74 _cell.length_c 61.78 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V9U _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,Q 1 1 B,J,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 12 1_555 F C20 91S . A 91S 204 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.796 ? covale ? covale2 A SG CYS 13 A CYS 12 1_555 F C20 91S . A 91S 204 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.663 ? covale ? covale3 B SG CYS 13 B CYS 12 1_555 M C20 91S . B 91S 204 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.76 ? covale ? covale4 B SG CYS 13 B CYS 12 1_555 M C20 91S . B 91S 204 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.64 ? metalc ? metalc1 A OG SER 18 A SER 17 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc2 A OE1 GLU 64 A GLU 63 1_555 D CA CA . A CA 202 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? metalc ? metalc3 A OE2 GLU 64 A GLU 63 1_555 D CA CA . A CA 202 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc4 A OD1 ASP 106 A ASP 105 1_555 E CA CA . A CA 203 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.463 ? metalc ? metalc5 A OD1 ASP 106 A ASP 105 1_555 E CA CA . A CA 203 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.779 ? metalc ? metalc6 A OD2 ASP 106 A ASP 105 1_555 E CA CA . A CA 203 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.74 ? metalc ? metalc7 A OD2 ASP 106 A ASP 105 1_555 E CA CA . A CA 203 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.412 ? metalc ? metalc8 A OE1 GLU 108 A GLU 107 1_555 I CA CA . A CA 207 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.198 ? metalc ? metalc9 A OE2 GLU 108 A GLU 107 1_555 I CA CA . A CA 207 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.81 ? metalc ? metalc10 A O GLY 139 A GLY 138 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc11 C CA CA . A CA 201 1_555 H O1B GDP . A GDP 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc12 C CA CA . A CA 201 1_555 Q O HOH . A HOH 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc13 C CA CA . A CA 201 1_555 Q O HOH . A HOH 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc14 C CA CA . A CA 201 1_555 Q O HOH . A HOH 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc15 C CA CA . A CA 201 1_555 Q O HOH . A HOH 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc16 D CA CA . A CA 202 1_555 Q O HOH . A HOH 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc17 D CA CA . A CA 202 1_555 Q O HOH . A HOH 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? metalc ? metalc18 D CA CA . A CA 202 1_555 Q O HOH . A HOH 469 1_455 ? ? ? ? A ? ? ? ? ? ? ? 2.568 ? metalc ? metalc19 D CA CA . A CA 202 1_555 Q O HOH . A HOH 469 1_455 ? ? ? ? B ? ? ? ? ? ? ? 2.551 ? metalc ? metalc20 D CA CA . A CA 202 1_555 Q O HOH . A HOH 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc21 E CA CA . A CA 203 1_555 Q O HOH . A HOH 390 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc22 E CA CA . A CA 203 1_555 Q O HOH . A HOH 442 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc23 E CA CA . A CA 203 1_555 R O HOH . B HOH 328 1_465 ? A ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc24 E CA CA . A CA 203 1_555 R O HOH . B HOH 345 1_465 ? A ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc25 E CA CA . A CA 203 1_555 R O HOH . B HOH 345 1_465 ? B ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc26 I CA CA . A CA 207 1_555 Q O HOH . A HOH 364 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc27 I CA CA . A CA 207 1_555 Q O HOH . A HOH 364 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc28 I CA CA . A CA 207 1_555 B OE1 GLU 64 B GLU 63 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc29 I CA CA . A CA 207 1_555 R O HOH . B HOH 309 1_455 ? A ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc30 I CA CA . A CA 207 1_555 R O HOH . B HOH 309 1_455 ? B ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc31 I CA CA . A CA 207 1_555 R O HOH . B HOH 344 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc32 I CA CA . A CA 207 1_555 R O HOH . B HOH 401 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc33 I CA CA . A CA 207 1_555 R O HOH . B HOH 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc34 I CA CA . A CA 207 1_555 R O HOH . B HOH 437 1_455 ? A ? ? ? ? ? ? ? ? ? ? 2.91 ? metalc ? metalc35 B OG SER 18 B SER 17 1_555 K CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc36 B OE1 GLU 64 B GLU 63 1_555 L CA CA . B CA 203 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc37 B OE2 GLU 64 B GLU 63 1_555 L CA CA . B CA 203 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc38 B O GLY 139 B GLY 138 1_555 L CA CA . B CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc39 K CA CA . B CA 202 1_555 P O3B GDP . B GDP 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc40 K CA CA . B CA 202 1_555 R O HOH . B HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc41 K CA CA . B CA 202 1_555 R O HOH . B HOH 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc42 K CA CA . B CA 202 1_555 R O HOH . B HOH 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc43 K CA CA . B CA 202 1_555 R O HOH . B HOH 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc44 L CA CA . B CA 203 1_555 R O HOH . B HOH 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc45 L CA CA . B CA 203 1_555 R O HOH . B HOH 412 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.693 ? metalc ? metalc46 L CA CA . B CA 203 1_555 R O HOH . B HOH 412 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.425 ? metalc ? metalc47 L CA CA . B CA 203 1_555 R O HOH . B HOH 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc48 L CA CA . B CA 203 1_555 R O HOH . B HOH 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 135 n n PB O2B GDP sing 136 n n PB O3B GDP sing 137 n n PB O3A GDP sing 138 n n O2B HOB2 GDP sing 139 n n O3B HOB3 GDP sing 140 n n O3A PA GDP sing 141 n n PA O1A GDP doub 142 n n PA O2A GDP sing 143 n n PA O5' GDP sing 144 n n O2A HOA2 GDP sing 145 n n O5' C5' GDP sing 146 n n C5' C4' GDP sing 147 n n C5' H5' GDP sing 148 n n C5' "H5''" GDP sing 149 n n C4' O4' GDP sing 150 n n C4' C3' GDP sing 151 n n C4' H4' GDP sing 152 n n O4' C1' GDP sing 153 n n C3' O3' GDP sing 154 n n C3' C2' GDP sing 155 n n C3' H3' GDP sing 156 n n O3' HO3' GDP sing 157 n n C2' O2' GDP sing 158 n n C2' C1' GDP sing 159 n n C2' H2' GDP sing 160 n n O2' HO2' GDP sing 161 n n C1' N9 GDP sing 162 n n C1' H1' GDP sing 163 n n N9 C8 GDP sing 164 n y N9 C4 GDP sing 165 n y C8 N7 GDP doub 166 n y C8 H8 GDP sing 167 n n N7 C5 GDP sing 168 n y C5 C6 GDP sing 169 n n C5 C4 GDP doub 170 n y C6 O6 GDP doub 171 n n C6 N1 GDP sing 172 n n N1 C2 GDP sing 173 n n N1 HN1 GDP sing 174 n n C2 N2 GDP sing 175 n n C2 N3 GDP doub 176 n n N2 HN21 GDP sing 177 n n N2 HN22 GDP sing 178 n n N3 C4 GDP sing 179 n n # _atom_sites.entry_id 5V9U _atom_sites.fract_transf_matrix[1][1] 0.029904 _atom_sites.fract_transf_matrix[1][2] -0.006794 _atom_sites.fract_transf_matrix[1][3] -0.002967 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025805 _atom_sites.fract_transf_matrix[2][3] -0.005061 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016658 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 201 200 CA CA . D 2 CA A 1 202 205 CA CA . E 2 CA A 1 203 207 CA CA . F 3 91S A 1 204 210 91S 620 . G 4 GOL A 1 205 215 GOL GOL . H 5 GDP A 1 206 220 GDP GDP . I 2 CA A 1 207 207 CA CA . J 4 GOL B 1 201 217 GOL GOL . K 2 CA B 1 202 200 CA CA . L 2 CA B 1 203 205 CA CA . M 3 91S B 1 204 210 91S 620 . N 4 GOL B 1 205 215 GOL GOL . O 4 GOL B 1 206 217 GOL GOL . P 5 GDP B 1 207 220 GDP GDP . Q 6 HOH A 1 301 111 HOH HOH . Q 6 HOH A 2 302 151 HOH HOH . Q 6 HOH A 3 303 366 HOH HOH . Q 6 HOH A 4 304 144 HOH HOH . Q 6 HOH A 5 305 93 HOH HOH . Q 6 HOH A 6 306 334 HOH HOH . Q 6 HOH A 7 307 83 HOH HOH . Q 6 HOH A 8 308 95 HOH HOH . Q 6 HOH A 9 309 94 HOH HOH . Q 6 HOH A 10 310 49 HOH HOH . Q 6 HOH A 11 311 21 HOH HOH . Q 6 HOH A 12 312 131 HOH HOH . Q 6 HOH A 13 313 139 HOH HOH . Q 6 HOH A 14 314 349 HOH HOH . Q 6 HOH A 15 315 358 HOH HOH . Q 6 HOH A 16 316 133 HOH HOH . Q 6 HOH A 17 317 120 HOH HOH . Q 6 HOH A 18 318 155 HOH HOH . Q 6 HOH A 19 319 70 HOH HOH . Q 6 HOH A 20 320 129 HOH HOH . Q 6 HOH A 21 321 364 HOH HOH . Q 6 HOH A 22 322 194 HOH HOH . Q 6 HOH A 23 323 68 HOH HOH . Q 6 HOH A 24 324 104 HOH HOH . Q 6 HOH A 25 325 85 HOH HOH . Q 6 HOH A 26 326 74 HOH HOH . Q 6 HOH A 27 327 369 HOH HOH . Q 6 HOH A 28 328 313 HOH HOH . Q 6 HOH A 29 329 371 HOH HOH . Q 6 HOH A 30 330 75 HOH HOH . Q 6 HOH A 31 331 5 HOH HOH . Q 6 HOH A 32 332 48 HOH HOH . Q 6 HOH A 33 333 88 HOH HOH . Q 6 HOH A 34 334 122 HOH HOH . Q 6 HOH A 35 335 108 HOH HOH . Q 6 HOH A 36 336 33 HOH HOH . Q 6 HOH A 37 337 150 HOH HOH . Q 6 HOH A 38 338 102 HOH HOH . Q 6 HOH A 39 339 112 HOH HOH . Q 6 HOH A 40 340 161 HOH HOH . Q 6 HOH A 41 341 8 HOH HOH . Q 6 HOH A 42 342 140 HOH HOH . Q 6 HOH A 43 343 19 HOH HOH . Q 6 HOH A 44 344 4 HOH HOH . Q 6 HOH A 45 345 126 HOH HOH . Q 6 HOH A 46 346 157 HOH HOH . Q 6 HOH A 47 347 1 HOH HOH . Q 6 HOH A 48 348 186 HOH HOH . Q 6 HOH A 49 349 27 HOH HOH . Q 6 HOH A 50 350 90 HOH HOH . Q 6 HOH A 51 351 332 HOH HOH . Q 6 HOH A 52 352 36 HOH HOH . Q 6 HOH A 53 353 331 HOH HOH . Q 6 HOH A 54 354 62 HOH HOH . Q 6 HOH A 55 355 145 HOH HOH . Q 6 HOH A 56 356 41 HOH HOH . Q 6 HOH A 57 357 25 HOH HOH . Q 6 HOH A 58 358 60 HOH HOH . Q 6 HOH A 59 359 96 HOH HOH . Q 6 HOH A 60 360 7 HOH HOH . Q 6 HOH A 61 361 119 HOH HOH . Q 6 HOH A 62 362 146 HOH HOH . Q 6 HOH A 63 363 12 HOH HOH . Q 6 HOH A 64 364 61 HOH HOH . Q 6 HOH A 65 365 138 HOH HOH . Q 6 HOH A 66 366 115 HOH HOH . Q 6 HOH A 67 367 84 HOH HOH . Q 6 HOH A 68 368 59 HOH HOH . Q 6 HOH A 69 369 40 HOH HOH . Q 6 HOH A 70 370 3 HOH HOH . Q 6 HOH A 71 371 159 HOH HOH . Q 6 HOH A 72 372 82 HOH HOH . Q 6 HOH A 73 373 9 HOH HOH . Q 6 HOH A 74 374 71 HOH HOH . Q 6 HOH A 75 375 78 HOH HOH . Q 6 HOH A 76 376 18 HOH HOH . Q 6 HOH A 77 377 53 HOH HOH . Q 6 HOH A 78 378 13 HOH HOH . Q 6 HOH A 79 379 148 HOH HOH . Q 6 HOH A 80 380 2 HOH HOH . Q 6 HOH A 81 381 35 HOH HOH . Q 6 HOH A 82 382 54 HOH HOH . Q 6 HOH A 83 383 6 HOH HOH . Q 6 HOH A 84 384 20 HOH HOH . Q 6 HOH A 85 385 56 HOH HOH . Q 6 HOH A 86 386 163 HOH HOH . Q 6 HOH A 87 387 105 HOH HOH . Q 6 HOH A 88 388 77 HOH HOH . Q 6 HOH A 89 389 118 HOH HOH . Q 6 HOH A 90 390 91 HOH HOH . Q 6 HOH A 91 391 44 HOH HOH . Q 6 HOH A 92 392 101 HOH HOH . Q 6 HOH A 93 393 376 HOH HOH . Q 6 HOH A 94 394 15 HOH HOH . Q 6 HOH A 95 395 16 HOH HOH . Q 6 HOH A 96 396 368 HOH HOH . Q 6 HOH A 97 397 67 HOH HOH . Q 6 HOH A 98 398 113 HOH HOH . Q 6 HOH A 99 399 227 HOH HOH . Q 6 HOH A 100 400 152 HOH HOH . Q 6 HOH A 101 401 39 HOH HOH . Q 6 HOH A 102 402 234 HOH HOH . Q 6 HOH A 103 403 86 HOH HOH . Q 6 HOH A 104 404 125 HOH HOH . Q 6 HOH A 105 405 17 HOH HOH . Q 6 HOH A 106 406 154 HOH HOH . Q 6 HOH A 107 407 132 HOH HOH . Q 6 HOH A 108 408 314 HOH HOH . Q 6 HOH A 109 409 80 HOH HOH . Q 6 HOH A 110 410 344 HOH HOH . Q 6 HOH A 111 411 47 HOH HOH . Q 6 HOH A 112 412 42 HOH HOH . Q 6 HOH A 113 413 162 HOH HOH . Q 6 HOH A 114 414 316 HOH HOH . Q 6 HOH A 115 415 121 HOH HOH . Q 6 HOH A 116 416 325 HOH HOH . Q 6 HOH A 117 417 32 HOH HOH . Q 6 HOH A 118 418 51 HOH HOH . Q 6 HOH A 119 419 98 HOH HOH . Q 6 HOH A 120 420 87 HOH HOH . Q 6 HOH A 121 421 153 HOH HOH . Q 6 HOH A 122 422 135 HOH HOH . Q 6 HOH A 123 423 92 HOH HOH . Q 6 HOH A 124 424 65 HOH HOH . Q 6 HOH A 125 425 116 HOH HOH . Q 6 HOH A 126 426 43 HOH HOH . Q 6 HOH A 127 427 55 HOH HOH . Q 6 HOH A 128 428 29 HOH HOH . Q 6 HOH A 129 429 114 HOH HOH . Q 6 HOH A 130 430 89 HOH HOH . Q 6 HOH A 131 431 37 HOH HOH . Q 6 HOH A 132 432 76 HOH HOH . Q 6 HOH A 133 433 14 HOH HOH . Q 6 HOH A 134 434 46 HOH HOH . Q 6 HOH A 135 435 34 HOH HOH . Q 6 HOH A 136 436 23 HOH HOH . Q 6 HOH A 137 437 31 HOH HOH . Q 6 HOH A 138 438 160 HOH HOH . Q 6 HOH A 139 439 324 HOH HOH . Q 6 HOH A 140 440 45 HOH HOH . Q 6 HOH A 141 441 345 HOH HOH . Q 6 HOH A 142 442 109 HOH HOH . Q 6 HOH A 143 443 141 HOH HOH . Q 6 HOH A 144 444 10 HOH HOH . Q 6 HOH A 145 445 350 HOH HOH . Q 6 HOH A 146 446 58 HOH HOH . Q 6 HOH A 147 447 63 HOH HOH . Q 6 HOH A 148 448 38 HOH HOH . Q 6 HOH A 149 449 81 HOH HOH . Q 6 HOH A 150 450 30 HOH HOH . Q 6 HOH A 151 451 69 HOH HOH . Q 6 HOH A 152 452 24 HOH HOH . Q 6 HOH A 153 453 97 HOH HOH . Q 6 HOH A 154 454 128 HOH HOH . Q 6 HOH A 155 455 158 HOH HOH . Q 6 HOH A 156 456 50 HOH HOH . Q 6 HOH A 157 457 52 HOH HOH . Q 6 HOH A 158 458 28 HOH HOH . Q 6 HOH A 159 459 347 HOH HOH . Q 6 HOH A 160 460 134 HOH HOH . Q 6 HOH A 161 461 337 HOH HOH . Q 6 HOH A 162 462 356 HOH HOH . Q 6 HOH A 163 463 300 HOH HOH . Q 6 HOH A 164 464 143 HOH HOH . Q 6 HOH A 165 465 130 HOH HOH . Q 6 HOH A 166 466 342 HOH HOH . Q 6 HOH A 167 467 336 HOH HOH . Q 6 HOH A 168 468 103 HOH HOH . Q 6 HOH A 169 469 22 HOH HOH . Q 6 HOH A 170 470 136 HOH HOH . Q 6 HOH A 171 471 156 HOH HOH . Q 6 HOH A 172 472 333 HOH HOH . Q 6 HOH A 173 473 11 HOH HOH . Q 6 HOH A 174 474 123 HOH HOH . Q 6 HOH A 175 475 26 HOH HOH . Q 6 HOH A 176 476 340 HOH HOH . Q 6 HOH A 177 477 147 HOH HOH . Q 6 HOH A 178 478 352 HOH HOH . Q 6 HOH A 179 479 365 HOH HOH . Q 6 HOH A 180 480 281 HOH HOH . Q 6 HOH A 181 481 72 HOH HOH . Q 6 HOH A 182 482 370 HOH HOH . Q 6 HOH A 183 483 117 HOH HOH . Q 6 HOH A 184 484 375 HOH HOH . Q 6 HOH A 185 485 64 HOH HOH . Q 6 HOH A 186 486 377 HOH HOH . Q 6 HOH A 187 487 107 HOH HOH . Q 6 HOH A 188 488 99 HOH HOH . Q 6 HOH A 189 489 142 HOH HOH . Q 6 HOH A 190 490 137 HOH HOH . Q 6 HOH A 191 491 124 HOH HOH . Q 6 HOH A 192 492 326 HOH HOH . Q 6 HOH A 193 493 354 HOH HOH . Q 6 HOH A 194 494 323 HOH HOH . Q 6 HOH A 195 495 57 HOH HOH . Q 6 HOH A 196 496 360 HOH HOH . R 6 HOH B 1 301 330 HOH HOH . R 6 HOH B 2 302 258 HOH HOH . R 6 HOH B 3 303 348 HOH HOH . R 6 HOH B 4 304 211 HOH HOH . R 6 HOH B 5 305 229 HOH HOH . R 6 HOH B 6 306 203 HOH HOH . R 6 HOH B 7 307 373 HOH HOH . R 6 HOH B 8 308 279 HOH HOH . R 6 HOH B 9 309 127 HOH HOH . R 6 HOH B 10 310 182 HOH HOH . R 6 HOH B 11 311 235 HOH HOH . R 6 HOH B 12 312 276 HOH HOH . R 6 HOH B 13 313 318 HOH HOH . R 6 HOH B 14 314 298 HOH HOH . R 6 HOH B 15 315 328 HOH HOH . R 6 HOH B 16 316 242 HOH HOH . R 6 HOH B 17 317 299 HOH HOH . R 6 HOH B 18 318 226 HOH HOH . R 6 HOH B 19 319 286 HOH HOH . R 6 HOH B 20 320 239 HOH HOH . R 6 HOH B 21 321 278 HOH HOH . R 6 HOH B 22 322 240 HOH HOH . R 6 HOH B 23 323 275 HOH HOH . R 6 HOH B 24 324 210 HOH HOH . R 6 HOH B 25 325 196 HOH HOH . R 6 HOH B 26 326 230 HOH HOH . R 6 HOH B 27 327 244 HOH HOH . R 6 HOH B 28 328 100 HOH HOH . R 6 HOH B 29 329 231 HOH HOH . R 6 HOH B 30 330 362 HOH HOH . R 6 HOH B 31 331 79 HOH HOH . R 6 HOH B 32 332 301 HOH HOH . R 6 HOH B 33 333 290 HOH HOH . R 6 HOH B 34 334 236 HOH HOH . R 6 HOH B 35 335 167 HOH HOH . R 6 HOH B 36 336 184 HOH HOH . R 6 HOH B 37 337 183 HOH HOH . R 6 HOH B 38 338 168 HOH HOH . R 6 HOH B 39 339 305 HOH HOH . R 6 HOH B 40 340 310 HOH HOH . R 6 HOH B 41 341 341 HOH HOH . R 6 HOH B 42 342 266 HOH HOH . R 6 HOH B 43 343 380 HOH HOH . R 6 HOH B 44 344 288 HOH HOH . R 6 HOH B 45 345 106 HOH HOH . R 6 HOH B 46 346 221 HOH HOH . R 6 HOH B 47 347 312 HOH HOH . R 6 HOH B 48 348 189 HOH HOH . R 6 HOH B 49 349 374 HOH HOH . R 6 HOH B 50 350 228 HOH HOH . R 6 HOH B 51 351 315 HOH HOH . R 6 HOH B 52 352 198 HOH HOH . R 6 HOH B 53 353 306 HOH HOH . R 6 HOH B 54 354 233 HOH HOH . R 6 HOH B 55 355 361 HOH HOH . R 6 HOH B 56 356 245 HOH HOH . R 6 HOH B 57 357 202 HOH HOH . R 6 HOH B 58 358 232 HOH HOH . R 6 HOH B 59 359 302 HOH HOH . R 6 HOH B 60 360 363 HOH HOH . R 6 HOH B 61 361 176 HOH HOH . R 6 HOH B 62 362 262 HOH HOH . R 6 HOH B 63 363 166 HOH HOH . R 6 HOH B 64 364 216 HOH HOH . R 6 HOH B 65 365 250 HOH HOH . R 6 HOH B 66 366 169 HOH HOH . R 6 HOH B 67 367 179 HOH HOH . R 6 HOH B 68 368 225 HOH HOH . R 6 HOH B 69 369 171 HOH HOH . R 6 HOH B 70 370 175 HOH HOH . R 6 HOH B 71 371 165 HOH HOH . R 6 HOH B 72 372 181 HOH HOH . R 6 HOH B 73 373 268 HOH HOH . R 6 HOH B 74 374 188 HOH HOH . R 6 HOH B 75 375 170 HOH HOH . R 6 HOH B 76 376 303 HOH HOH . R 6 HOH B 77 377 164 HOH HOH . R 6 HOH B 78 378 220 HOH HOH . R 6 HOH B 79 379 329 HOH HOH . R 6 HOH B 80 380 110 HOH HOH . R 6 HOH B 81 381 285 HOH HOH . R 6 HOH B 82 382 249 HOH HOH . R 6 HOH B 83 383 294 HOH HOH . R 6 HOH B 84 384 215 HOH HOH . R 6 HOH B 85 385 190 HOH HOH . R 6 HOH B 86 386 317 HOH HOH . R 6 HOH B 87 387 214 HOH HOH . R 6 HOH B 88 388 309 HOH HOH . R 6 HOH B 89 389 269 HOH HOH . R 6 HOH B 90 390 283 HOH HOH . R 6 HOH B 91 391 180 HOH HOH . R 6 HOH B 92 392 246 HOH HOH . R 6 HOH B 93 393 237 HOH HOH . R 6 HOH B 94 394 256 HOH HOH . R 6 HOH B 95 395 219 HOH HOH . R 6 HOH B 96 396 327 HOH HOH . R 6 HOH B 97 397 270 HOH HOH . R 6 HOH B 98 398 197 HOH HOH . R 6 HOH B 99 399 66 HOH HOH . R 6 HOH B 100 400 191 HOH HOH . R 6 HOH B 101 401 357 HOH HOH . R 6 HOH B 102 402 195 HOH HOH . R 6 HOH B 103 403 193 HOH HOH . R 6 HOH B 104 404 241 HOH HOH . R 6 HOH B 105 405 265 HOH HOH . R 6 HOH B 106 406 308 HOH HOH . R 6 HOH B 107 407 149 HOH HOH . R 6 HOH B 108 408 222 HOH HOH . R 6 HOH B 109 409 295 HOH HOH . R 6 HOH B 110 410 343 HOH HOH . R 6 HOH B 111 411 259 HOH HOH . R 6 HOH B 112 412 185 HOH HOH . R 6 HOH B 113 413 280 HOH HOH . R 6 HOH B 114 414 289 HOH HOH . R 6 HOH B 115 415 247 HOH HOH . R 6 HOH B 116 416 253 HOH HOH . R 6 HOH B 117 417 307 HOH HOH . R 6 HOH B 118 418 218 HOH HOH . R 6 HOH B 119 419 204 HOH HOH . R 6 HOH B 120 420 177 HOH HOH . R 6 HOH B 121 421 178 HOH HOH . R 6 HOH B 122 422 205 HOH HOH . R 6 HOH B 123 423 201 HOH HOH . R 6 HOH B 124 424 292 HOH HOH . R 6 HOH B 125 425 209 HOH HOH . R 6 HOH B 126 426 73 HOH HOH . R 6 HOH B 127 427 212 HOH HOH . R 6 HOH B 128 428 207 HOH HOH . R 6 HOH B 129 429 217 HOH HOH . R 6 HOH B 130 430 293 HOH HOH . R 6 HOH B 131 431 238 HOH HOH . R 6 HOH B 132 432 223 HOH HOH . R 6 HOH B 133 433 173 HOH HOH . R 6 HOH B 134 434 263 HOH HOH . R 6 HOH B 135 435 192 HOH HOH . R 6 HOH B 136 436 264 HOH HOH . R 6 HOH B 137 437 206 HOH HOH . R 6 HOH B 138 438 338 HOH HOH . R 6 HOH B 139 439 200 HOH HOH . R 6 HOH B 140 440 199 HOH HOH . R 6 HOH B 141 441 351 HOH HOH . R 6 HOH B 142 442 172 HOH HOH . R 6 HOH B 143 443 346 HOH HOH . R 6 HOH B 144 444 243 HOH HOH . R 6 HOH B 145 445 213 HOH HOH . R 6 HOH B 146 446 260 HOH HOH . R 6 HOH B 147 447 284 HOH HOH . R 6 HOH B 148 448 251 HOH HOH . R 6 HOH B 149 449 248 HOH HOH . R 6 HOH B 150 450 261 HOH HOH . R 6 HOH B 151 451 296 HOH HOH . R 6 HOH B 152 452 208 HOH HOH . R 6 HOH B 153 453 187 HOH HOH . R 6 HOH B 154 454 287 HOH HOH . R 6 HOH B 155 455 271 HOH HOH . R 6 HOH B 156 456 255 HOH HOH . R 6 HOH B 157 457 304 HOH HOH . R 6 HOH B 158 458 367 HOH HOH . R 6 HOH B 159 459 272 HOH HOH . R 6 HOH B 160 460 254 HOH HOH . R 6 HOH B 161 461 273 HOH HOH . R 6 HOH B 162 462 353 HOH HOH . R 6 HOH B 163 463 174 HOH HOH . R 6 HOH B 164 464 339 HOH HOH . R 6 HOH B 165 465 322 HOH HOH . R 6 HOH B 166 466 320 HOH HOH . R 6 HOH B 167 467 297 HOH HOH . R 6 HOH B 168 468 372 HOH HOH . R 6 HOH B 169 469 319 HOH HOH . R 6 HOH B 170 470 359 HOH HOH . R 6 HOH B 171 471 378 HOH HOH . R 6 HOH B 172 472 381 HOH HOH . R 6 HOH B 173 473 274 HOH HOH . R 6 HOH B 174 474 335 HOH HOH . R 6 HOH B 175 475 257 HOH HOH . R 6 HOH B 176 476 277 HOH HOH . R 6 HOH B 177 477 291 HOH HOH . R 6 HOH B 178 478 311 HOH HOH . R 6 HOH B 179 479 267 HOH HOH . R 6 HOH B 180 480 252 HOH HOH . R 6 HOH B 181 481 355 HOH HOH . R 6 HOH B 182 482 282 HOH HOH . R 6 HOH B 183 483 224 HOH HOH . R 6 HOH B 184 484 379 HOH HOH . R 6 HOH B 185 485 321 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . P 5 -10.989 -8.067 34.284 1 4.62 ? PB GDP 207 B 1 HETATM 2 O O1B GDP . . . P 5 -12.236 -7.952 33.443 1 4.71 -1 O1B GDP 207 B 1 HETATM 3 O O2B GDP . . . P 5 -9.776 -7.549 33.572 1 4.31 ? O2B GDP 207 B 1 HETATM 4 O O3B GDP . . . P 5 -11.142 -7.516 35.665 1 5.07 ? O3B GDP 207 B 1 HETATM 5 O O3A GDP . . . P 5 -10.702 -9.661 34.427 1 5.49 ? O3A GDP 207 B 1 HETATM 6 P PA GDP . . . P 5 -11.028 -10.638 35.674 1 5.45 ? PA GDP 207 B 1 HETATM 7 O O1A GDP . . . P 5 -12.495 -10.666 35.927 1 6.15 ? O1A GDP 207 B 1 HETATM 8 O O2A GDP . . . P 5 -10.086 -10.362 36.793 1 5.94 -1 O2A GDP 207 B 1 HETATM 9 O O5' GDP . . . P 5 -10.64 -12.032 35.048 1 5.01 ? O5' GDP 207 B 1 HETATM 10 C C5' GDP . . . P 5 -11.315 -12.527 33.857 1 5.41 ? C5' GDP 207 B 1 HETATM 11 C C4' GDP . . . P 5 -11.306 -14.021 33.845 1 6.39 ? C4' GDP 207 B 1 HETATM 12 O O4' GDP . . . P 5 -9.952 -14.404 33.6 1 6.17 ? O4' GDP 207 B 1 HETATM 13 C C3' GDP . . . P 5 -11.757 -14.65 35.154 1 7.15 ? C3' GDP 207 B 1 HETATM 14 O O3' GDP . . . P 5 -12.357 -15.945 34.794 1 9.33 ? O3' GDP 207 B 1 HETATM 15 C C2' GDP . . . P 5 -10.44 -14.947 35.818 1 6.66 ? C2' GDP 207 B 1 HETATM 16 O O2' GDP . . . P 5 -10.42 -16.02 36.788 1 8.26 ? O2' GDP 207 B 1 HETATM 17 C C1' GDP . . . P 5 -9.544 -15.289 34.666 1 6.37 ? C1' GDP 207 B 1 HETATM 18 N N9 GDP . . . P 5 -8.147 -14.932 35.006 1 5.63 ? N9 GDP 207 B 1 HETATM 19 C C8 GDP . . . P 5 -7.669 -13.769 35.445 1 5.44 ? C8 GDP 207 B 1 HETATM 20 N N7 GDP . . . P 5 -6.308 -13.728 35.602 1 5.48 ? N7 GDP 207 B 1 HETATM 21 C C5 GDP . . . P 5 -5.904 -14.975 35.279 1 4.85 ? C5 GDP 207 B 1 HETATM 22 C C6 GDP . . . P 5 -4.66 -15.676 35.103 1 5.49 ? C6 GDP 207 B 1 HETATM 23 O O6 GDP . . . P 5 -3.589 -15.119 35.399 1 5.17 ? O6 GDP 207 B 1 HETATM 24 N N1 GDP . . . P 5 -4.68 -16.932 34.667 1 5.02 ? N1 GDP 207 B 1 HETATM 25 C C2 GDP . . . P 5 -5.766 -17.595 34.264 1 5.7 ? C2 GDP 207 B 1 HETATM 26 N N2 GDP . . . P 5 -5.668 -18.883 33.892 1 6.82 ? N2 GDP 207 B 1 HETATM 27 N N3 GDP . . . P 5 -6.991 -17.024 34.345 1 5.27 ? N3 GDP 207 B 1 HETATM 28 C C4 GDP . . . P 5 -7.083 -15.755 34.795 1 5.53 ? C4 GDP 207 B 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 49 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #