data_5VAC
#
_model_server_result.job_id            sB9ag8Ch4VQnqpttGou1Ug 
_model_server_result.datetime_utc      '2024-10-12 12:22:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5vac 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    5VAC 
#
_exptl.entry_id    5VAC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5VAC 
_cell.length_a            74.548 
_cell.length_b            81.353 
_cell.length_c            88.503 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 5VAC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     5VAC 
_atom_sites.fract_transf_matrix[1][1]    0.013414 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012292 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011299 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SAH A 1 401 120 SAH SAH . 
D 4 DMS A 1 402 3092 DMS DMS . 
E 5 HOH A 1 501 4 HOH HOH . 
E 5 HOH A 2 502 49 HOH HOH . 
E 5 HOH A 3 503 10 HOH HOH . 
E 5 HOH A 4 504 18 HOH HOH . 
E 5 HOH A 5 505 21 HOH HOH . 
E 5 HOH A 6 506 7 HOH HOH . 
E 5 HOH A 7 507 22 HOH HOH . 
E 5 HOH A 8 508 14 HOH HOH . 
E 5 HOH A 9 509 20 HOH HOH . 
E 5 HOH A 10 510 30 HOH HOH . 
E 5 HOH A 11 511 63 HOH HOH . 
E 5 HOH A 12 512 35 HOH HOH . 
E 5 HOH A 13 513 45 HOH HOH . 
E 5 HOH A 14 514 2 HOH HOH . 
E 5 HOH A 15 515 25 HOH HOH . 
E 5 HOH A 16 516 40 HOH HOH . 
E 5 HOH A 17 517 3 HOH HOH . 
E 5 HOH A 18 518 44 HOH HOH . 
E 5 HOH A 19 519 34 HOH HOH . 
E 5 HOH A 20 520 43 HOH HOH . 
E 5 HOH A 21 521 5 HOH HOH . 
E 5 HOH A 22 522 1 HOH HOH . 
E 5 HOH A 23 523 19 HOH HOH . 
E 5 HOH A 24 524 32 HOH HOH . 
E 5 HOH A 25 525 76 HOH HOH . 
E 5 HOH A 26 526 65 HOH HOH . 
E 5 HOH A 27 527 36 HOH HOH . 
E 5 HOH A 28 528 48 HOH HOH . 
E 5 HOH A 29 529 24 HOH HOH . 
E 5 HOH A 30 530 41 HOH HOH . 
E 5 HOH A 31 531 27 HOH HOH . 
E 5 HOH A 32 532 38 HOH HOH . 
E 5 HOH A 33 533 96 HOH HOH . 
E 5 HOH A 34 534 52 HOH HOH . 
E 5 HOH A 35 535 64 HOH HOH . 
E 5 HOH A 36 536 6 HOH HOH . 
E 5 HOH A 37 537 13 HOH HOH . 
E 5 HOH A 38 538 59 HOH HOH . 
E 5 HOH A 39 539 71 HOH HOH . 
E 5 HOH A 40 540 9 HOH HOH . 
E 5 HOH A 41 541 51 HOH HOH . 
E 5 HOH A 42 542 31 HOH HOH . 
E 5 HOH A 43 543 54 HOH HOH . 
E 5 HOH A 44 544 28 HOH HOH . 
E 5 HOH A 45 545 50 HOH HOH . 
E 5 HOH A 46 546 12 HOH HOH . 
E 5 HOH A 47 547 26 HOH HOH . 
E 5 HOH A 48 548 42 HOH HOH . 
E 5 HOH A 49 549 53 HOH HOH . 
E 5 HOH A 50 550 68 HOH HOH . 
E 5 HOH A 51 551 57 HOH HOH . 
E 5 HOH A 52 552 8 HOH HOH . 
E 5 HOH A 53 553 23 HOH HOH . 
E 5 HOH A 54 554 55 HOH HOH . 
E 5 HOH A 55 555 15 HOH HOH . 
E 5 HOH A 56 556 61 HOH HOH . 
E 5 HOH A 57 557 16 HOH HOH . 
E 5 HOH A 58 558 17 HOH HOH . 
E 5 HOH A 59 559 46 HOH HOH . 
E 5 HOH A 60 560 58 HOH HOH . 
E 5 HOH A 61 561 37 HOH HOH . 
E 5 HOH A 62 562 39 HOH HOH . 
E 5 HOH A 63 563 11 HOH HOH . 
E 5 HOH A 64 564 95 HOH HOH . 
E 5 HOH A 65 565 78 HOH HOH . 
E 5 HOH A 66 566 74 HOH HOH . 
E 5 HOH A 67 567 70 HOH HOH . 
E 5 HOH A 68 568 33 HOH HOH . 
E 5 HOH A 69 569 72 HOH HOH . 
E 5 HOH A 70 570 60 HOH HOH . 
E 5 HOH A 71 571 67 HOH HOH . 
E 5 HOH A 72 572 47 HOH HOH . 
E 5 HOH A 73 573 62 HOH HOH . 
E 5 HOH A 74 574 73 HOH HOH . 
E 5 HOH A 75 575 66 HOH HOH . 
E 5 HOH A 76 576 75 HOH HOH . 
E 5 HOH A 77 577 94 HOH HOH . 
F 5 HOH C 1 101 29 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 4 -33.78 -8.61 -17.464 1 72.61 ? S DMS 402 A 1 
HETATM 2 O O DMS . . . D 4 -33.251 -10.101 -18.334 1 56.53 ? O DMS 402 A 1 
HETATM 3 C C1 DMS . . . D 4 -34.887 -9.033 -16.088 1 62.31 ? C1 DMS 402 A 1 
HETATM 4 C C2 DMS . . . D 4 -32.38 -7.903 -16.544 1 70.8 ? C2 DMS 402 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#