data_5VB2 # _model_server_result.job_id Fm0ktiyjedz9LrRSK5P6Qg _model_server_result.datetime_utc '2024-10-27 12:34:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vb2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1302}' # _entry.id 5VB2 # _exptl.entry_id 5VB2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 614.877 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5VB2 _cell.length_a 125.963 _cell.length_b 129.853 _cell.length_c 196.128 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VB2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 K N N ? 2 L N N ? 2 R N N ? 2 S N N ? 2 Y N N ? 2 Z N N # _chem_comp.formula 'C32 H58 N2 O7 S' _chem_comp.formula_weight 614.877 _chem_comp.id CPS _chem_comp.mon_nstd_flag . _chem_comp.name 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms CHAPS # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CPS sing 70 n n C1 C12 CPS sing 71 n n C2 C11 CPS sing 72 n n C2 C15 CPS sing 73 n n C2 C19 CPS sing 74 n n C3 C4 CPS sing 75 n n C3 C19 CPS sing 76 n n C4 C5 CPS sing 77 n n C4 O4 CPS sing 78 n n C5 C6 CPS sing 79 n n C5 C9 CPS sing 80 n n C5 C10 CPS sing 81 n n C6 C7 CPS sing 82 n n C6 C18 CPS sing 83 n n C7 C8 CPS sing 84 n n C8 C9 CPS sing 85 n n C9 C20 CPS sing 86 n n C12 C13 CPS sing 87 n n C13 C14 CPS sing 88 n n C13 O2 CPS sing 89 n n C14 C15 CPS sing 90 n n C15 C16 CPS sing 91 n n C16 C17 CPS sing 92 n n C17 C18 CPS sing 93 n n C17 O3 CPS sing 94 n n C18 C19 CPS sing 95 n n C20 C21 CPS sing 96 n n C20 C22 CPS sing 97 n n C22 C23 CPS sing 98 n n C23 C24 CPS sing 99 n n C24 N1 CPS sing 100 n n C24 O1 CPS doub 101 n n C25 C26 CPS sing 102 n n C25 N1 CPS sing 103 n n C26 C27 CPS sing 104 n n C27 N2 CPS sing 105 n n C28 N2 CPS sing 106 n n C29 N2 CPS sing 107 n n C30 C31 CPS sing 108 n n C30 N2 CPS sing 109 n n C31 C32 CPS sing 110 n n C32 S CPS sing 111 n n O2S S CPS sing 112 n n O3S S CPS doub 113 n n O1S S CPS doub 114 n n C1 H1 CPS sing 115 n n C1 H1A CPS sing 116 n n C3 H3 CPS sing 117 n n C3 H3A CPS sing 118 n n C4 H4 CPS sing 119 n n C6 H6 CPS sing 120 n n C7 H7 CPS sing 121 n n C7 H7A CPS sing 122 n n C8 H8 CPS sing 123 n n C8 H8A CPS sing 124 n n C9 H9 CPS sing 125 n n C10 H10 CPS sing 126 n n C10 H10A CPS sing 127 n n C10 H10B CPS sing 128 n n C11 H11 CPS sing 129 n n C11 H11A CPS sing 130 n n C11 H11B CPS sing 131 n n C12 H12 CPS sing 132 n n C12 H12A CPS sing 133 n n C13 H13 CPS sing 134 n n C14 H14 CPS sing 135 n n C14 H14A CPS sing 136 n n C15 H15 CPS sing 137 n n C16 H16 CPS sing 138 n n C16 H16A CPS sing 139 n n C17 H17 CPS sing 140 n n C18 H18 CPS sing 141 n n C19 H19 CPS sing 142 n n C20 H20 CPS sing 143 n n C21 H21 CPS sing 144 n n C21 H21A CPS sing 145 n n C21 H21B CPS sing 146 n n C22 H22 CPS sing 147 n n C22 H22A CPS sing 148 n n C23 H23 CPS sing 149 n n C23 H23A CPS sing 150 n n C25 H25 CPS sing 151 n n C25 H25A CPS sing 152 n n C26 H261 CPS sing 153 n n C27 H271 CPS sing 154 n n C28 H28 CPS sing 155 n n C28 H28A CPS sing 156 n n C28 H28B CPS sing 157 n n C29 H29 CPS sing 158 n n C29 H29A CPS sing 159 n n C29 H29B CPS sing 160 n n C30 H30 CPS sing 161 n n C30 H30A CPS sing 162 n n C31 H31 CPS sing 163 n n C31 H31A CPS sing 164 n n C32 H32 CPS sing 165 n n C32 H32A CPS sing 166 n n N1 HN1 CPS sing 167 n n O2 HO2 CPS sing 168 n n O3 HO3 CPS sing 169 n n O4 HO4 CPS sing 170 n n C26 H262 CPS sing 171 n n C27 H272 CPS sing 172 n n # _atom_sites.entry_id 5VB2 _atom_sites.fract_transf_matrix[1][1] 0.007939 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007701 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005099 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CPS A 1 1301 1301 CPS CPS . F 2 CPS A 1 1302 1302 CPS CPS . G 3 PX4 A 1 1303 1303 PX4 PX4 . H 3 PX4 A 1 1304 1304 PX4 PX4 . I 3 PX4 A 1 1305 1305 PX4 PX4 . J 4 PO4 A 1 1306 1306 PO4 PO4 . K 2 CPS B 1 2301 2301 CPS CPS . L 2 CPS B 1 2302 2302 CPS CPS . M 3 PX4 B 1 2303 2303 PX4 PX4 . N 3 PX4 B 1 2304 2304 PX4 PX4 . O 3 PX4 B 1 2305 2305 PX4 PX4 . P 3 PX4 B 1 2306 2306 PX4 PX4 . Q 4 PO4 B 1 2307 2307 PO4 PO4 . R 2 CPS C 1 1301 1301 CPS CPS . S 2 CPS C 1 1302 1302 CPS CPS . T 3 PX4 C 1 1303 1303 PX4 PX4 . U 3 PX4 C 1 1304 1304 PX4 PX4 . V 3 PX4 C 1 1305 1305 PX4 PX4 . W 4 PO4 C 1 1306 1306 PO4 PO4 . X 5 CL C 1 1307 1307 CL CL . Y 2 CPS D 1 2301 2301 CPS CPS . Z 2 CPS D 1 2302 2302 CPS CPS . AA 3 PX4 D 1 2303 2303 PX4 PX4 . BA 3 PX4 D 1 2304 2304 PX4 PX4 . CA 3 PX4 D 1 2305 2305 PX4 PX4 . DA 4 PO4 D 1 2306 2306 PO4 PO4 . EA 6 HOH A 1 1401 1401 HOH HOH . EA 6 HOH A 2 1402 1402 HOH HOH . EA 6 HOH A 3 1403 1403 HOH HOH . EA 6 HOH A 4 1404 1404 HOH HOH . EA 6 HOH A 5 1405 1405 HOH HOH . EA 6 HOH A 6 1406 1406 HOH HOH . EA 6 HOH A 7 1407 1407 HOH HOH . EA 6 HOH A 8 1408 1408 HOH HOH . FA 6 HOH B 1 2401 2401 HOH HOH . FA 6 HOH B 2 2402 2402 HOH HOH . FA 6 HOH B 3 2403 2403 HOH HOH . FA 6 HOH B 4 2404 2404 HOH HOH . FA 6 HOH B 5 2405 2405 HOH HOH . FA 6 HOH B 6 2406 2406 HOH HOH . GA 6 HOH C 1 1401 1401 HOH HOH . GA 6 HOH C 2 1402 1402 HOH HOH . GA 6 HOH C 3 1403 1403 HOH HOH . GA 6 HOH C 4 1404 1404 HOH HOH . GA 6 HOH C 5 1405 1405 HOH HOH . HA 6 HOH D 1 2401 2401 HOH HOH . HA 6 HOH D 2 2402 2402 HOH HOH . HA 6 HOH D 3 2403 2403 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CPS . . . F 2 9.489 151.824 42.412 1 80.77 ? C1 CPS 1302 A 1 HETATM 2 C C2 CPS . . . F 2 8.522 150.666 42.714 1 80.77 ? C2 CPS 1302 A 1 HETATM 3 C C3 CPS . . . F 2 8.776 150.872 45.267 1 81.26 ? C3 CPS 1302 A 1 HETATM 4 C C4 CPS . . . F 2 9.214 150.124 46.542 1 81.52 ? C4 CPS 1302 A 1 HETATM 5 C C5 CPS . . . F 2 8.284 148.945 46.804 1 81.14 ? C5 CPS 1302 A 1 HETATM 6 C C6 CPS . . . F 2 8.308 148.055 45.528 1 80.77 ? C6 CPS 1302 A 1 HETATM 7 C C7 CPS . . . F 2 7.381 146.918 45.96 1 80.77 ? C7 CPS 1302 A 1 HETATM 8 C C8 CPS . . . F 2 7.869 146.641 47.404 1 80.77 ? C8 CPS 1302 A 1 HETATM 9 C C9 CPS . . . F 2 8.728 147.867 47.813 1 81.38 ? C9 CPS 1302 A 1 HETATM 10 C C10 CPS . . . F 2 6.887 149.481 47.165 1 81.4 ? C10 CPS 1302 A 1 HETATM 11 C C11 CPS . . . F 2 7.114 151.286 42.701 1 80.77 ? C11 CPS 1302 A 1 HETATM 12 C C12 CPS . . . F 2 10.923 151.338 42.2 1 80.77 ? C12 CPS 1302 A 1 HETATM 13 C C13 CPS . . . F 2 10.961 150.356 41.033 1 80.77 ? C13 CPS 1302 A 1 HETATM 14 C C14 CPS . . . F 2 10.049 149.168 41.338 1 80.77 ? C14 CPS 1302 A 1 HETATM 15 C C15 CPS . . . F 2 8.614 149.668 41.548 1 80.77 ? C15 CPS 1302 A 1 HETATM 16 C C16 CPS . . . F 2 7.673 148.476 41.76 1 80.77 ? C16 CPS 1302 A 1 HETATM 17 C C17 CPS . . . F 2 7.866 147.789 43.115 1 80.77 ? C17 CPS 1302 A 1 HETATM 18 C C18 CPS . . . F 2 7.848 148.786 44.28 1 80.77 ? C18 CPS 1302 A 1 HETATM 19 C C19 CPS . . . F 2 8.829 149.95 44.052 1 80.77 ? C19 CPS 1302 A 1 HETATM 20 C C20 CPS . . . F 2 8.519 148.192 49.312 1 80.77 ? C20 CPS 1302 A 1 HETATM 21 C C21 CPS . . . F 2 9.427 149.364 49.711 1 80.77 ? C21 CPS 1302 A 1 HETATM 22 C C22 CPS . . . F 2 8.763 146.908 50.148 1 80.77 ? C22 CPS 1302 A 1 HETATM 23 C C23 CPS . . . F 2 9.789 147.034 51.284 1 80.77 ? C23 CPS 1302 A 1 HETATM 24 O O2 CPS . . . F 2 12.302 149.897 40.857 1 80.77 ? O2 CPS 1302 A 1 HETATM 25 O O3 CPS . . . F 2 9.099 147.067 43.118 1 80.77 ? O3 CPS 1302 A 1 HETATM 26 O O4 CPS . . . F 2 10.552 149.645 46.369 1 83.41 ? O4 CPS 1302 A 1 HETATM 27 H H1 CPS . . . F 2 9.154 152.339 41.512 1 96.92 ? H1 CPS 1302 A 1 HETATM 28 H H1A CPS . . . F 2 9.474 152.525 43.247 1 96.92 ? H1A CPS 1302 A 1 HETATM 29 H H3 CPS . . . F 2 7.758 151.236 45.397 1 97.51 ? H3 CPS 1302 A 1 HETATM 30 H H3A CPS . . . F 2 9.441 151.72 45.103 1 97.51 ? H3A CPS 1302 A 1 HETATM 31 H H4 CPS . . . F 2 9.18 150.806 47.391 1 97.82 ? H4 CPS 1302 A 1 HETATM 32 H H6 CPS . . . F 2 9.314 147.664 45.376 1 96.92 ? H6 CPS 1302 A 1 HETATM 33 H H7 CPS . . . F 2 6.34 147.242 45.955 1 96.92 ? H7 CPS 1302 A 1 HETATM 34 H H7A CPS . . . F 2 7.52 146.042 45.327 1 96.92 ? H7A CPS 1302 A 1 HETATM 35 H H8 CPS . . . F 2 7.015 146.54 48.074 1 96.92 ? H8 CPS 1302 A 1 HETATM 36 H H8A CPS . . . F 2 8.474 145.734 47.428 1 96.92 ? H8A CPS 1302 A 1 HETATM 37 H H9 CPS . . . F 2 9.78 147.637 47.645 1 97.66 ? H9 CPS 1302 A 1 HETATM 38 H H10 CPS . . . F 2 6.378 149.811 46.259 1 97.68 ? H10 CPS 1302 A 1 HETATM 39 H H10A CPS . . . F 2 6.306 148.692 47.642 1 97.68 ? H10A CPS 1302 A 1 HETATM 40 H H10B CPS . . . F 2 6.987 150.323 47.852 1 97.68 ? H10B CPS 1302 A 1 HETATM 41 H H11 CPS . . . F 2 6.903 151.685 41.709 1 96.92 ? H11 CPS 1302 A 1 HETATM 42 H H11A CPS . . . F 2 6.378 150.521 42.95 1 96.92 ? H11A CPS 1302 A 1 HETATM 43 H H11B CPS . . . F 2 7.065 152.09 43.436 1 96.92 ? H11B CPS 1302 A 1 HETATM 44 H H12 CPS . . . F 2 11.567 152.189 41.979 1 96.92 ? H12 CPS 1302 A 1 HETATM 45 H H12A CPS . . . F 2 11.276 150.84 43.103 1 96.92 ? H12A CPS 1302 A 1 HETATM 46 H H13 CPS . . . F 2 10.623 150.854 40.124 1 96.92 ? H13 CPS 1302 A 1 HETATM 47 H H14 CPS . . . F 2 10.073 148.468 40.503 1 96.92 ? H14 CPS 1302 A 1 HETATM 48 H H14A CPS . . . F 2 10.396 148.667 42.242 1 96.92 ? H14A CPS 1302 A 1 HETATM 49 H H15 CPS . . . F 2 8.301 150.184 40.64 1 96.92 ? H15 CPS 1302 A 1 HETATM 50 H H16 CPS . . . F 2 6.643 148.827 41.69 1 96.92 ? H16 CPS 1302 A 1 HETATM 51 H H16A CPS . . . F 2 7.849 147.747 40.969 1 96.92 ? H16A CPS 1302 A 1 HETATM 52 H H17 CPS . . . F 2 7.051 147.079 43.257 1 96.92 ? H17 CPS 1302 A 1 HETATM 53 H H18 CPS . . . F 2 6.835 149.16 44.426 1 96.93 ? H18 CPS 1302 A 1 HETATM 54 H H19 CPS . . . F 2 9.833 149.529 43.988 1 96.92 ? H19 CPS 1302 A 1 HETATM 55 H H20 CPS . . . F 2 7.483 148.5 49.454 1 96.92 ? H20 CPS 1302 A 1 HETATM 56 H H21 CPS . . . F 2 9.008 150.294 49.328 1 96.92 ? H21 CPS 1302 A 1 HETATM 57 H H21A CPS . . . F 2 9.496 149.418 50.798 1 96.92 ? H21A CPS 1302 A 1 HETATM 58 H H21B CPS . . . F 2 10.421 149.213 49.291 1 96.92 ? H21B CPS 1302 A 1 HETATM 59 H H22 CPS . . . F 2 7.812 146.601 50.584 1 96.92 ? H22 CPS 1302 A 1 HETATM 60 H H22A CPS . . . F 2 9.098 146.121 49.473 1 96.92 ? H22A CPS 1302 A 1 HETATM 61 H H23 CPS . . . F 2 10.724 147.431 50.886 1 96.92 ? H23 CPS 1302 A 1 HETATM 62 H H23A CPS . . . F 2 9.404 147.71 52.049 1 96.92 ? H23A CPS 1302 A 1 HETATM 63 H HO2 CPS . . . F 2 12.913 150.577 40.542 1 96.92 ? HO2 CPS 1302 A 1 HETATM 64 H HO3 CPS . . . F 2 9.062 146.222 42.651 1 96.92 ? HO3 CPS 1302 A 1 HETATM 65 H HO4 CPS . . . F 2 11.171 149.958 47.043 1 100.09 ? HO4 CPS 1302 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 44 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 65 #