data_5VB2
#
_model_server_result.job_id            LI_m7s8OXf0JjvO3_scG8Q 
_model_server_result.datetime_utc      '2024-10-27 12:34:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5vb2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":2307}' 
#
_entry.id    5VB2 
#
_exptl.entry_id    5VB2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5VB2 
_cell.length_a            125.963 
_cell.length_b            129.853 
_cell.length_c            196.128 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5VB2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 Q N N 
? 4 W N N 
? 4 DA N N 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 350 n n 
P O2 PO4 sing 351 n n 
P O3 PO4 sing 352 n n 
P O4 PO4 sing 353 n n 
#
_atom_sites.entry_id                     5VB2 
_atom_sites.fract_transf_matrix[1][1]    0.007939 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007701 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005099 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CPS A 1 1301 1301 CPS CPS . 
F 2 CPS A 1 1302 1302 CPS CPS . 
G 3 PX4 A 1 1303 1303 PX4 PX4 . 
H 3 PX4 A 1 1304 1304 PX4 PX4 . 
I 3 PX4 A 1 1305 1305 PX4 PX4 . 
J 4 PO4 A 1 1306 1306 PO4 PO4 . 
K 2 CPS B 1 2301 2301 CPS CPS . 
L 2 CPS B 1 2302 2302 CPS CPS . 
M 3 PX4 B 1 2303 2303 PX4 PX4 . 
N 3 PX4 B 1 2304 2304 PX4 PX4 . 
O 3 PX4 B 1 2305 2305 PX4 PX4 . 
P 3 PX4 B 1 2306 2306 PX4 PX4 . 
Q 4 PO4 B 1 2307 2307 PO4 PO4 . 
R 2 CPS C 1 1301 1301 CPS CPS . 
S 2 CPS C 1 1302 1302 CPS CPS . 
T 3 PX4 C 1 1303 1303 PX4 PX4 . 
U 3 PX4 C 1 1304 1304 PX4 PX4 . 
V 3 PX4 C 1 1305 1305 PX4 PX4 . 
W 4 PO4 C 1 1306 1306 PO4 PO4 . 
X 5 CL C 1 1307 1307 CL CL . 
Y 2 CPS D 1 2301 2301 CPS CPS . 
Z 2 CPS D 1 2302 2302 CPS CPS . 
AA 3 PX4 D 1 2303 2303 PX4 PX4 . 
BA 3 PX4 D 1 2304 2304 PX4 PX4 . 
CA 3 PX4 D 1 2305 2305 PX4 PX4 . 
DA 4 PO4 D 1 2306 2306 PO4 PO4 . 
EA 6 HOH A 1 1401 1401 HOH HOH . 
EA 6 HOH A 2 1402 1402 HOH HOH . 
EA 6 HOH A 3 1403 1403 HOH HOH . 
EA 6 HOH A 4 1404 1404 HOH HOH . 
EA 6 HOH A 5 1405 1405 HOH HOH . 
EA 6 HOH A 6 1406 1406 HOH HOH . 
EA 6 HOH A 7 1407 1407 HOH HOH . 
EA 6 HOH A 8 1408 1408 HOH HOH . 
FA 6 HOH B 1 2401 2401 HOH HOH . 
FA 6 HOH B 2 2402 2402 HOH HOH . 
FA 6 HOH B 3 2403 2403 HOH HOH . 
FA 6 HOH B 4 2404 2404 HOH HOH . 
FA 6 HOH B 5 2405 2405 HOH HOH . 
FA 6 HOH B 6 2406 2406 HOH HOH . 
GA 6 HOH C 1 1401 1401 HOH HOH . 
GA 6 HOH C 2 1402 1402 HOH HOH . 
GA 6 HOH C 3 1403 1403 HOH HOH . 
GA 6 HOH C 4 1404 1404 HOH HOH . 
GA 6 HOH C 5 1405 1405 HOH HOH . 
HA 6 HOH D 1 2401 2401 HOH HOH . 
HA 6 HOH D 2 2402 2402 HOH HOH . 
HA 6 HOH D 3 2403 2403 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . Q 4 28.967 169.008 35.664 1 205.83 ? P PO4 2307 B 1 
HETATM 2 O O1 PO4 . . . Q 4 28.619 170.01 34.594 1 202.65 ? O1 PO4 2307 B 1 
HETATM 3 O O2 PO4 . . . Q 4 29.917 169.662 36.634 1 203.17 ? O2 PO4 2307 B 1 
HETATM 4 O O3 PO4 . . . Q 4 29.634 167.796 35.064 1 203.88 ? O3 PO4 2307 B 1 
HETATM 5 O O4 PO4 . . . Q 4 27.699 168.576 36.355 1 203.08 ? O4 PO4 2307 B 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           5 
#