# Name: GDP # Created by ModelServer 0.9.11 # model_server_result.job_id: u2u0gvurzqqKmITD5pBkag # model_server_result.datetime_utc: 2024-05-02 06:53:31 # model_server_result.server_version: 0.9.11 # model_server_result.query_name: ligand # model_server_result.source_id: pdb-bcif # model_server_result.entry_id: 5vbe # model_server_params.name: atom_site # model_server_params.value: {"label_asym_id":"B","auth_seq_id":201} # model_server_stats.io_time_ms: 3 # model_server_stats.parse_time_ms: 70 # model_server_stats.create_model_time_ms: 3 # model_server_stats.query_time_ms: 244 # model_server_stats.encode_time_ms: 0 # model_server_stats.element_count: 40 @MOLECULE GDP 40 42 1 **** **** @ATOM 1 PB -8.661 13.648 -21.219 P.3 1 GDP 0.000 2 O1B -9.341 12.769 -22.287 O.2 1 GDP 0.000 3 O2B -9.732 14.658 -20.644 O.3 1 GDP 0.000 4 O3B -7.980 12.783 -20.142 O.3 1 GDP 0.000 5 O3A -7.556 14.503 -22.007 O.3 1 GDP 0.000 6 PA -7.189 16.048 -21.847 P.3 1 GDP 0.000 7 O1A -8.246 16.898 -22.420 O.2 1 GDP 0.000 8 O2A -6.821 16.269 -20.393 O.3 1 GDP 0.000 9 O5' -5.894 16.158 -22.751 O.3 1 GDP 0.000 10 C5' -4.780 15.305 -22.530 C.3 1 GDP 0.000 11 C4' -3.551 15.891 -23.174 C.3 1 GDP 0.000 12 O4' -3.588 15.877 -24.494 O.3 1 GDP 0.000 13 C3' -3.380 17.472 -22.785 C.3 1 GDP 0.000 14 O3' -1.901 17.651 -22.600 O.3 1 GDP 0.000 15 C2' -3.864 18.124 -23.752 C.3 1 GDP 0.000 16 O2' -3.175 19.429 -24.011 O.3 1 GDP 0.000 17 C1' -3.567 17.248 -25.051 C.3 1 GDP 0.000 18 N9 -4.479 17.335 -25.994 N.ar 1 GDP 0.000 19 C8 -5.821 17.155 -26.016 C.ar 1 GDP 0.000 20 N7 -6.275 17.319 -27.267 N.ar 1 GDP 0.000 21 C5 -5.212 17.568 -28.055 C.ar 1 GDP 0.000 22 C6 -5.115 17.802 -29.536 C.2 1 GDP 0.000 23 O6 -6.109 17.815 -30.253 O.2 1 GDP 0.000 24 N1 -3.843 18.037 -30.076 N.am 1 GDP 0.000 25 C2 -2.687 18.046 -29.252 C.cat 1 GDP 0.000 26 N2 -1.475 18.273 -29.860 N.pl3 1 GDP 0.000 27 N3 -2.766 17.799 -27.839 N.2 1 GDP 0.000 28 C4 -4.074 17.547 -27.260 C.ar 1 GDP 0.000 29 H5' -4.956 14.458 -22.894 H 1 GDP 0.000 30 H5'' -4.626 15.219 -21.557 H 1 GDP 0.000 31 H4' -2.764 15.398 -22.870 H 1 GDP 0.000 32 H3' -3.868 17.681 -21.940 H 1 GDP 0.000 33 HO3' -1.598 17.025 -22.095 H 1 GDP 0.000 34 H2' -4.896 18.264 -23.627 H 1 GDP 0.000 35 HO2' -3.714 19.960 -24.526 H 1 GDP 0.000 36 H1' -2.657 17.463 -25.419 H 1 GDP 0.000 37 H8 -6.366 16.978 -25.251 H 1 GDP 0.000 38 HN1 -3.757 18.195 -30.971 H 1 GDP 0.000 39 HN21 -1.438 18.418 -30.738 H 1 GDP 0.000 40 HN22 -0.688 18.278 -29.351 H 1 GDP 0.000 @BOND 1 1 2 2 2 1 3 1 3 1 4 1 4 1 5 1 5 5 6 1 6 6 7 2 7 6 8 1 8 6 9 1 9 9 10 1 10 10 11 1 11 10 29 1 12 10 30 1 13 11 12 1 14 11 13 1 15 11 31 1 16 12 17 1 17 13 14 1 18 13 15 1 19 13 32 1 20 14 33 1 21 15 16 1 22 15 17 1 23 15 34 1 24 16 35 1 25 17 18 1 26 17 36 1 27 18 19 ar 28 18 28 ar 29 19 20 ar 30 19 37 1 31 20 21 ar 32 21 22 1 33 21 28 ar 34 22 23 2 35 22 24 1 36 24 25 1 37 24 38 1 38 25 26 1 39 25 27 2 40 26 39 1 41 26 40 1 42 27 28 1 @SUBSTRUCTURE 1 GDP 1