data_5VC6 # _model_server_result.job_id FIzFd9BQ_miqaNydTg_qYA _model_server_result.datetime_utc '2024-11-16 16:39:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vc6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 5VC6 # _exptl.entry_id 5VC6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 460.575 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N,1,4,4-TETRAMETHYL-8-{[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]AMINO}-4,5-DIHYDRO-1H-PYRAZOLO[4,3-H]QUINAZOLINE-3-CARBOXAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.91 _cell.angle_gamma 90 _cell.entry_id 5VC6 _cell.length_a 50.43 _cell.length_b 44.92 _cell.length_c 64.8 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VC6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H32 N8 O' _chem_comp.formula_weight 460.575 _chem_comp.id P48 _chem_comp.mon_nstd_flag . _chem_comp.name N,1,4,4-TETRAMETHYL-8-{[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]AMINO}-4,5-DIHYDRO-1H-PYRAZOLO[4,3-H]QUINAZOLINE-3-CARBOXAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P48 doub 246 n n C2 N3 P48 sing 247 n n C2 C5 P48 sing 248 n n N3 C4 P48 sing 249 n n C5 N6 P48 doub 250 n y C5 C10 P48 sing 251 n y N6 N7 P48 sing 252 n y N7 C8 P48 sing 253 n n N7 C9 P48 sing 254 n y C9 C10 P48 doub 255 n y C9 C11 P48 sing 256 n y C10 C14 P48 sing 257 n n C11 C12 P48 sing 258 n y C11 N17 P48 doub 259 n y C12 C13 P48 sing 260 n n C12 C20 P48 doub 261 n y C13 C14 P48 sing 262 n n C14 C15 P48 sing 263 n n C14 C16 P48 sing 264 n n N17 C18 P48 sing 265 n y C18 N19 P48 doub 266 n y C18 N21 P48 sing 267 n n N19 C20 P48 sing 268 n y N21 C22 P48 sing 269 n n C22 C23 P48 sing 270 n y C22 C27 P48 doub 271 n y C23 C24 P48 doub 272 n y C24 C25 P48 sing 273 n y C25 C26 P48 doub 274 n y C25 N28 P48 sing 275 n n C26 C27 P48 sing 276 n y N28 C29 P48 sing 277 n n N28 C34 P48 sing 278 n n C29 C30 P48 sing 279 n n C30 N31 P48 sing 280 n n N31 C32 P48 sing 281 n n N31 C33 P48 sing 282 n n C33 C34 P48 sing 283 n n N3 H3 P48 sing 284 n n C4 H41C P48 sing 285 n n C4 H42C P48 sing 286 n n C4 H43C P48 sing 287 n n C8 H81C P48 sing 288 n n C8 H82C P48 sing 289 n n C8 H83C P48 sing 290 n n C13 H131 P48 sing 291 n n C13 H132 P48 sing 292 n n C20 H20 P48 sing 293 n n C15 H151 P48 sing 294 n n C15 H152 P48 sing 295 n n C15 H153 P48 sing 296 n n C16 H161 P48 sing 297 n n C16 H162 P48 sing 298 n n C16 H163 P48 sing 299 n n N21 H21 P48 sing 300 n n C23 H23 P48 sing 301 n n C27 H27 P48 sing 302 n n C24 H24 P48 sing 303 n n C26 H26 P48 sing 304 n n C29 H291 P48 sing 305 n n C29 H292 P48 sing 306 n n C34 H341 P48 sing 307 n n C34 H342 P48 sing 308 n n C30 H301 P48 sing 309 n n C30 H302 P48 sing 310 n n C32 H321 P48 sing 311 n n C32 H322 P48 sing 312 n n C32 H323 P48 sing 313 n n C33 H331 P48 sing 314 n n C33 H332 P48 sing 315 n n # _atom_sites.entry_id 5VC6 _atom_sites.fract_transf_matrix[1][1] 0.019829 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004544 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022262 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015832 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P48 A 1 601 1 P48 P48 . C 3 EDO A 1 602 1 EDO EDO . D 4 HOH A 1 701 65 HOH HOH . D 4 HOH A 2 702 61 HOH HOH . D 4 HOH A 3 703 45 HOH HOH . D 4 HOH A 4 704 3 HOH HOH . D 4 HOH A 5 705 13 HOH HOH . D 4 HOH A 6 706 29 HOH HOH . D 4 HOH A 7 707 41 HOH HOH . D 4 HOH A 8 708 51 HOH HOH . D 4 HOH A 9 709 19 HOH HOH . D 4 HOH A 10 710 78 HOH HOH . D 4 HOH A 11 711 92 HOH HOH . D 4 HOH A 12 712 43 HOH HOH . D 4 HOH A 13 713 26 HOH HOH . D 4 HOH A 14 714 52 HOH HOH . D 4 HOH A 15 715 75 HOH HOH . D 4 HOH A 16 716 83 HOH HOH . D 4 HOH A 17 717 17 HOH HOH . D 4 HOH A 18 718 15 HOH HOH . D 4 HOH A 19 719 23 HOH HOH . D 4 HOH A 20 720 53 HOH HOH . D 4 HOH A 21 721 80 HOH HOH . D 4 HOH A 22 722 16 HOH HOH . D 4 HOH A 23 723 4 HOH HOH . D 4 HOH A 24 724 10 HOH HOH . D 4 HOH A 25 725 42 HOH HOH . D 4 HOH A 26 726 18 HOH HOH . D 4 HOH A 27 727 9 HOH HOH . D 4 HOH A 28 728 21 HOH HOH . D 4 HOH A 29 729 56 HOH HOH . D 4 HOH A 30 730 93 HOH HOH . D 4 HOH A 31 731 24 HOH HOH . D 4 HOH A 32 732 1 HOH HOH . D 4 HOH A 33 733 64 HOH HOH . D 4 HOH A 34 734 25 HOH HOH . D 4 HOH A 35 735 76 HOH HOH . D 4 HOH A 36 736 70 HOH HOH . D 4 HOH A 37 737 69 HOH HOH . D 4 HOH A 38 738 12 HOH HOH . D 4 HOH A 39 739 32 HOH HOH . D 4 HOH A 40 740 5 HOH HOH . D 4 HOH A 41 741 20 HOH HOH . D 4 HOH A 42 742 35 HOH HOH . D 4 HOH A 43 743 7 HOH HOH . D 4 HOH A 44 744 27 HOH HOH . D 4 HOH A 45 745 6 HOH HOH . D 4 HOH A 46 746 90 HOH HOH . D 4 HOH A 47 747 46 HOH HOH . D 4 HOH A 48 748 82 HOH HOH . D 4 HOH A 49 749 58 HOH HOH . D 4 HOH A 50 750 31 HOH HOH . D 4 HOH A 51 751 60 HOH HOH . D 4 HOH A 52 752 14 HOH HOH . D 4 HOH A 53 753 91 HOH HOH . D 4 HOH A 54 754 48 HOH HOH . D 4 HOH A 55 755 11 HOH HOH . D 4 HOH A 56 756 33 HOH HOH . D 4 HOH A 57 757 87 HOH HOH . D 4 HOH A 58 758 85 HOH HOH . D 4 HOH A 59 759 44 HOH HOH . D 4 HOH A 60 760 47 HOH HOH . D 4 HOH A 61 761 79 HOH HOH . D 4 HOH A 62 762 59 HOH HOH . D 4 HOH A 63 763 94 HOH HOH . D 4 HOH A 64 764 71 HOH HOH . D 4 HOH A 65 765 57 HOH HOH . D 4 HOH A 66 766 2 HOH HOH . D 4 HOH A 67 767 40 HOH HOH . D 4 HOH A 68 768 8 HOH HOH . D 4 HOH A 69 769 28 HOH HOH . D 4 HOH A 70 770 22 HOH HOH . D 4 HOH A 71 771 34 HOH HOH . D 4 HOH A 72 772 81 HOH HOH . D 4 HOH A 73 773 72 HOH HOH . D 4 HOH A 74 774 54 HOH HOH . D 4 HOH A 75 775 36 HOH HOH . D 4 HOH A 76 776 68 HOH HOH . D 4 HOH A 77 777 38 HOH HOH . D 4 HOH A 78 778 30 HOH HOH . D 4 HOH A 79 779 95 HOH HOH . D 4 HOH A 80 780 39 HOH HOH . D 4 HOH A 81 781 73 HOH HOH . D 4 HOH A 82 782 63 HOH HOH . D 4 HOH A 83 783 77 HOH HOH . D 4 HOH A 84 784 66 HOH HOH . D 4 HOH A 85 785 50 HOH HOH . D 4 HOH A 86 786 86 HOH HOH . D 4 HOH A 87 787 55 HOH HOH . D 4 HOH A 88 788 49 HOH HOH . D 4 HOH A 89 789 74 HOH HOH . D 4 HOH A 90 790 62 HOH HOH . D 4 HOH A 91 791 89 HOH HOH . D 4 HOH A 92 792 67 HOH HOH . D 4 HOH A 93 793 84 HOH HOH . D 4 HOH A 94 794 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P48 . . . B 2 50.392 1.471 11.061 1 25.14 ? O1 P48 601 A 1 HETATM 2 C C2 P48 . . . B 2 49.71 1.855 10.147 1 27.19 ? C2 P48 601 A 1 HETATM 3 N N3 P48 . . . B 2 49.968 1.575 8.875 1 28.62 ? N3 P48 601 A 1 HETATM 4 C C4 P48 . . . B 2 51.176 0.898 8.438 1 25.56 ? C4 P48 601 A 1 HETATM 5 C C5 P48 . . . B 2 48.569 2.712 10.482 1 24.11 ? C5 P48 601 A 1 HETATM 6 N N6 P48 . . . B 2 48.136 3.682 9.694 1 26.5 ? N6 P48 601 A 1 HETATM 7 N N7 P48 . . . B 2 47.069 4.3 10.301 1 23.64 ? N7 P48 601 A 1 HETATM 8 C C8 P48 . . . B 2 46.475 5.406 9.53 1 25.49 ? C8 P48 601 A 1 HETATM 9 C C9 P48 . . . B 2 46.771 3.737 11.461 1 21.36 ? C9 P48 601 A 1 HETATM 10 C C10 P48 . . . B 2 47.746 2.653 11.721 1 19.22 ? C10 P48 601 A 1 HETATM 11 C C11 P48 . . . B 2 45.761 4.114 12.462 1 21.64 ? C11 P48 601 A 1 HETATM 12 C C12 P48 . . . B 2 45.585 3.257 13.564 1 11.6 ? C12 P48 601 A 1 HETATM 13 C C13 P48 . . . B 2 46.311 1.93 13.713 1 11.67 ? C13 P48 601 A 1 HETATM 14 C C14 P48 . . . B 2 47.671 1.809 13.019 1 16.94 ? C14 P48 601 A 1 HETATM 15 C C15 P48 . . . B 2 48.757 2.106 14.045 1 18.71 ? C15 P48 601 A 1 HETATM 16 C C16 P48 . . . B 2 47.754 0.382 12.582 1 16.62 ? C16 P48 601 A 1 HETATM 17 N N17 P48 . . . B 2 45.086 5.295 12.374 1 18.61 ? N17 P48 601 A 1 HETATM 18 C C18 P48 . . . B 2 44.188 5.664 13.322 1 16.34 ? C18 P48 601 A 1 HETATM 19 N N19 P48 . . . B 2 44 4.841 14.392 1 12.13 ? N19 P48 601 A 1 HETATM 20 C C20 P48 . . . B 2 44.663 3.663 14.52 1 12.34 ? C20 P48 601 A 1 HETATM 21 N N21 P48 . . . B 2 43.476 6.798 13.298 1 14.42 ? N21 P48 601 A 1 HETATM 22 C C22 P48 . . . B 2 43.245 7.743 12.321 1 16.88 ? C22 P48 601 A 1 HETATM 23 C C23 P48 . . . B 2 42.096 8.594 12.381 1 12.19 ? C23 P48 601 A 1 HETATM 24 C C24 P48 . . . B 2 41.851 9.542 11.404 1 16.31 ? C24 P48 601 A 1 HETATM 25 C C25 P48 . . . B 2 42.764 9.706 10.332 1 29.44 ? C25 P48 601 A 1 HETATM 26 C C26 P48 . . . B 2 43.935 8.871 10.258 1 26.32 ? C26 P48 601 A 1 HETATM 27 C C27 P48 . . . B 2 44.175 7.902 11.254 1 19.08 ? C27 P48 601 A 1 HETATM 28 N N28 P48 . . . B 2 42.518 10.674 9.345 1 46.89 ? N28 P48 601 A 1 HETATM 29 C C29 P48 . . . B 2 42.226 12.055 9.753 1 55.62 ? C29 P48 601 A 1 HETATM 30 C C30 P48 . . . B 2 42.818 12.903 8.629 1 56.98 ? C30 P48 601 A 1 HETATM 31 N N31 P48 . . . B 2 42.273 12.324 7.395 1 56.04 ? N31 P48 601 A 1 HETATM 32 C C32 P48 . . . B 2 41.116 12.924 6.734 1 48.28 ? C32 P48 601 A 1 HETATM 33 C C33 P48 . . . B 2 42.742 11.013 6.968 1 67.03 ? C33 P48 601 A 1 HETATM 34 C C34 P48 . . . B 2 42.093 10.132 8.032 1 65.77 ? C34 P48 601 A 1 HETATM 35 H H3 P48 . . . B 2 49.548 2.1 8.251 1 34.34 ? H3 P48 601 A 1 HETATM 36 H H41C P48 . . . B 2 51.123 0.724 7.473 1 30.67 ? H41C P48 601 A 1 HETATM 37 H H42C P48 . . . B 2 51.956 1.465 8.627 1 30.67 ? H42C P48 601 A 1 HETATM 38 H H43C P48 . . . B 2 51.266 0.047 8.92 1 30.67 ? H43C P48 601 A 1 HETATM 39 H H81C P48 . . . B 2 46.653 6.256 9.988 1 30.59 ? H81C P48 601 A 1 HETATM 40 H H82C P48 . . . B 2 46.871 5.428 8.631 1 30.59 ? H82C P48 601 A 1 HETATM 41 H H83C P48 . . . B 2 45.506 5.27 9.457 1 30.59 ? H83C P48 601 A 1 HETATM 42 H H131 P48 . . . B 2 46.446 1.765 14.673 1 14.01 ? H131 P48 601 A 1 HETATM 43 H H132 P48 . . . B 2 45.727 1.224 13.359 1 14.01 ? H132 P48 601 A 1 HETATM 44 H H20 P48 . . . B 2 44.482 3.088 15.293 1 14.8 ? H20 P48 601 A 1 HETATM 45 H H151 P48 . . . B 2 48.86 3.078 14.141 1 22.45 ? H151 P48 601 A 1 HETATM 46 H H152 P48 . . . B 2 49.607 1.714 13.745 1 22.45 ? H152 P48 601 A 1 HETATM 47 H H153 P48 . . . B 2 48.504 1.716 14.911 1 22.45 ? H153 P48 601 A 1 HETATM 48 H H161 P48 . . . B 2 48.592 0.239 12.085 1 19.95 ? H161 P48 601 A 1 HETATM 49 H H162 P48 . . . B 2 47.737 -0.204 13.371 1 19.95 ? H162 P48 601 A 1 HETATM 50 H H163 P48 . . . B 2 46.989 0.172 12 1 19.95 ? H163 P48 601 A 1 HETATM 51 H H21 P48 . . . B 2 43.057 6.983 14.094 1 17.3 ? H21 P48 601 A 1 HETATM 52 H H23 P48 . . . B 2 41.456 8.485 13.115 1 14.63 ? H23 P48 601 A 1 HETATM 53 H H27 P48 . . . B 2 44.971 7.329 11.203 1 22.89 ? H27 P48 601 A 1 HETATM 54 H H24 P48 . . . B 2 41.053 10.109 11.46 1 19.57 ? H24 P48 601 A 1 HETATM 55 H H26 P48 . . . B 2 44.569 8.979 9.516 1 31.58 ? H26 P48 601 A 1 HETATM 56 H H291 P48 . . . B 2 42.665 12.262 10.608 1 66.75 ? H291 P48 601 A 1 HETATM 57 H H292 P48 . . . B 2 41.256 12.197 9.818 1 66.75 ? H292 P48 601 A 1 HETATM 58 H H341 P48 . . . B 2 42.402 9.204 7.935 1 78.92 ? H341 P48 601 A 1 HETATM 59 H H342 P48 . . . B 2 41.113 10.172 7.952 1 78.92 ? H342 P48 601 A 1 HETATM 60 H H301 P48 . . . B 2 42.534 13.84 8.721 1 68.37 ? H301 P48 601 A 1 HETATM 61 H H302 P48 . . . B 2 43.799 12.839 8.632 1 68.37 ? H302 P48 601 A 1 HETATM 62 H H321 P48 . . . B 2 40.384 13.024 7.383 1 57.94 ? H321 P48 601 A 1 HETATM 63 H H322 P48 . . . B 2 41.363 13.807 6.379 1 57.94 ? H322 P48 601 A 1 HETATM 64 H H323 P48 . . . B 2 40.823 12.345 5.996 1 57.94 ? H323 P48 601 A 1 HETATM 65 H H331 P48 . . . B 2 42.407 10.791 6.071 1 80.44 ? H331 P48 601 A 1 HETATM 66 H H332 P48 . . . B 2 43.722 10.956 7.009 1 80.44 ? H332 P48 601 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 66 #