data_5VCW # _model_server_result.job_id nz9J9e1MrMVl-lMiH3pF2Q _model_server_result.datetime_utc '2024-11-24 14:08:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vcw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 5VCW # _exptl.entry_id 5VCW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 467.923 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-3-cyano-7-ethoxyquinolin-6-yl}-4-(dimethylamino)but-2-enamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.27 _cell.angle_gamma 90 _cell.entry_id 5VCW _cell.length_a 50.51 _cell.length_b 112.9 _cell.length_c 72.71 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VCW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,N 1 1 B,H,I,J,K,L,M,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 H N N # _chem_comp.formula 'C24 H23 Cl F N5 O2' _chem_comp.formula_weight 467.923 _chem_comp.id 93J _chem_comp.mon_nstd_flag . _chem_comp.name (2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-3-cyano-7-ethoxyquinolin-6-yl}-4-(dimethylamino)but-2-enamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C05 N02 93J sing 1 n n CL1 C21 93J sing 2 n n F01 C22 93J sing 3 n n C22 C21 93J doub 4 n y C22 C23 93J sing 5 n y C21 C20 93J sing 6 n y N02 C06 93J sing 7 n n N02 C04 93J sing 8 n n C23 C24 93J doub 9 n y C20 C19 93J doub 10 n y C24 C19 93J sing 11 n y C19 N05 93J sing 12 n n C03 C04 93J sing 13 n n C03 C02 93J doub 14 e n O01 C01 93J doub 15 n n C01 C02 93J sing 16 n n C01 N01 93J sing 17 n n N05 C09 93J sing 18 n n N01 C12 93J sing 19 n n C11 C12 93J doub 20 n y C11 C10 93J sing 21 n y C12 C13 93J sing 22 n y C09 C10 93J doub 23 n y C09 C08 93J sing 24 n y C10 C15 93J sing 25 n y N04 C18 93J trip 26 n n C18 C08 93J sing 27 n n C08 C07 93J doub 28 n y C13 O02 93J sing 29 n n C13 C14 93J doub 30 n y O02 C16 93J sing 31 n n C15 C14 93J sing 32 n y C15 N03 93J doub 33 n y C07 N03 93J sing 34 n y C16 C17 93J sing 35 n n C17 H1 93J sing 36 n n C17 H2 93J sing 37 n n C17 H3 93J sing 38 n n C20 H4 93J sing 39 n n C24 H5 93J sing 40 n n C02 H6 93J sing 41 n n C03 H7 93J sing 42 n n C04 H8 93J sing 43 n n C04 H9 93J sing 44 n n N01 H10 93J sing 45 n n C05 H12 93J sing 46 n n C05 H13 93J sing 47 n n C05 H14 93J sing 48 n n C06 H15 93J sing 49 n n C06 H16 93J sing 50 n n C06 H17 93J sing 51 n n C07 H18 93J sing 52 n n C11 H19 93J sing 53 n n C14 H20 93J sing 54 n n C16 H21 93J sing 55 n n C16 H22 93J sing 56 n n N05 H23 93J sing 57 n n C23 H24 93J sing 58 n n # _atom_sites.entry_id 5VCW _atom_sites.fract_transf_matrix[1][1] 0.019798 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006922 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008857 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01457 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 93J A 1 401 1 93J LIG . D 3 SO4 A 1 402 3 SO4 SO4 . E 4 EDO A 1 403 1 EDO EDO . F 4 EDO A 1 404 3 EDO EDO . G 4 EDO A 1 405 4 EDO EDO . H 2 93J B 1 401 2 93J LIG . I 3 SO4 B 1 402 1 SO4 SO4 . J 3 SO4 B 1 403 2 SO4 SO4 . K 3 SO4 B 1 404 4 SO4 SO4 . L 3 SO4 B 1 405 5 SO4 SO4 . M 4 EDO B 1 406 2 EDO EDO . N 5 HOH A 1 501 19 HOH HOH . N 5 HOH A 2 502 52 HOH HOH . N 5 HOH A 3 503 38 HOH HOH . N 5 HOH A 4 504 45 HOH HOH . N 5 HOH A 5 505 17 HOH HOH . N 5 HOH A 6 506 6 HOH HOH . N 5 HOH A 7 507 16 HOH HOH . N 5 HOH A 8 508 33 HOH HOH . N 5 HOH A 9 509 7 HOH HOH . N 5 HOH A 10 510 2 HOH HOH . N 5 HOH A 11 511 34 HOH HOH . N 5 HOH A 12 512 15 HOH HOH . N 5 HOH A 13 513 18 HOH HOH . N 5 HOH A 14 514 3 HOH HOH . N 5 HOH A 15 515 40 HOH HOH . N 5 HOH A 16 516 37 HOH HOH . N 5 HOH A 17 517 4 HOH HOH . N 5 HOH A 18 518 47 HOH HOH . N 5 HOH A 19 519 31 HOH HOH . N 5 HOH A 20 520 36 HOH HOH . N 5 HOH A 21 521 46 HOH HOH . N 5 HOH A 22 522 42 HOH HOH . N 5 HOH A 23 523 41 HOH HOH . N 5 HOH A 24 524 11 HOH HOH . N 5 HOH A 25 525 44 HOH HOH . O 5 HOH B 1 501 10 HOH HOH . O 5 HOH B 2 502 32 HOH HOH . O 5 HOH B 3 503 12 HOH HOH . O 5 HOH B 4 504 26 HOH HOH . O 5 HOH B 5 505 39 HOH HOH . O 5 HOH B 6 506 28 HOH HOH . O 5 HOH B 7 507 1 HOH HOH . O 5 HOH B 8 508 5 HOH HOH . O 5 HOH B 9 509 51 HOH HOH . O 5 HOH B 10 510 50 HOH HOH . O 5 HOH B 11 511 23 HOH HOH . O 5 HOH B 12 512 20 HOH HOH . O 5 HOH B 13 513 9 HOH HOH . O 5 HOH B 14 514 8 HOH HOH . O 5 HOH B 15 515 24 HOH HOH . O 5 HOH B 16 516 14 HOH HOH . O 5 HOH B 17 517 30 HOH HOH . O 5 HOH B 18 518 25 HOH HOH . O 5 HOH B 19 519 48 HOH HOH . O 5 HOH B 20 520 21 HOH HOH . O 5 HOH B 21 521 22 HOH HOH . O 5 HOH B 22 522 49 HOH HOH . O 5 HOH B 23 523 27 HOH HOH . O 5 HOH B 24 524 29 HOH HOH . O 5 HOH B 25 525 13 HOH HOH . O 5 HOH B 26 526 35 HOH HOH . O 5 HOH B 27 527 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 93J . . . H 2 5.349 -3.21 12.085 1 42.16 ? C10 93J 401 B 1 HETATM 2 C C13 93J . . . H 2 6.261 -0.566 12.574 1 48.24 ? C13 93J 401 B 1 HETATM 3 C C15 93J . . . H 2 4.632 -2.343 12.955 1 49.47 ? C15 93J 401 B 1 HETATM 4 C C17 93J . . . H 2 6.134 2.872 13.635 1 66.86 ? C17 93J 401 B 1 HETATM 5 C C20 93J . . . H 2 3.607 -6.169 9.653 1 45.96 ? C20 93J 401 B 1 HETATM 6 C C21 93J . . . H 2 2.96 -7.187 8.926 1 54.58 ? C21 93J 401 B 1 HETATM 7 C C22 93J . . . H 2 3.606 -8.417 8.688 1 53.6 ? C22 93J 401 B 1 HETATM 8 C C24 93J . . . H 2 5.54 -7.592 9.933 1 48.22 ? C24 93J 401 B 1 HETATM 9 C C01 93J . . . H 2 9.075 -1.458 10.327 1 64.96 ? C01 93J 401 B 1 HETATM 10 C C02 93J . . . H 2 10.414 -1.162 10.538 1 65.88 ? C02 93J 401 B 1 HETATM 11 C C03 93J . . . H 2 11.305 -1.099 9.531 1 73.84 ? C03 93J 401 B 1 HETATM 12 C C04 93J . . . H 2 12.716 -0.785 9.692 1 80.43 ? C04 93J 401 B 1 HETATM 13 O O01 93J . . . H 2 8.752 -2.207 9.372 1 74.71 ? O01 93J 401 B 1 HETATM 14 N N01 93J . . . H 2 8.132 -0.88 11.138 1 57.96 ? N01 93J 401 B 1 HETATM 15 N N02 93J . . . H 2 13.341 -0.309 8.409 1 82.96 ? N02 93J 401 B 1 HETATM 16 C C05 93J . . . H 2 12.566 0.757 7.69 1 78.03 ? C05 93J 401 B 1 HETATM 17 C C06 93J . . . H 2 14.776 0.057 8.579 1 81.33 ? C06 93J 401 B 1 HETATM 18 N N03 93J . . . H 2 3.504 -2.772 13.565 1 45.9 ? N03 93J 401 B 1 HETATM 19 C C07 93J . . . H 2 3.01 -4.012 13.378 1 47.36 ? C07 93J 401 B 1 HETATM 20 C C08 93J . . . H 2 3.67 -4.932 12.539 1 48.07 ? C08 93J 401 B 1 HETATM 21 C C09 93J . . . H 2 4.878 -4.543 11.858 1 46.43 ? C09 93J 401 B 1 HETATM 22 C C11 93J . . . H 2 6.52 -2.704 11.472 1 50.99 ? C11 93J 401 B 1 HETATM 23 C C12 93J . . . H 2 6.992 -1.389 11.703 1 51.25 ? C12 93J 401 B 1 HETATM 24 C C14 93J . . . H 2 5.083 -1.026 13.192 1 50.07 ? C14 93J 401 B 1 HETATM 25 O O02 93J . . . H 2 6.688 0.703 12.813 1 69.21 ? O02 93J 401 B 1 HETATM 26 C C16 93J . . . H 2 6.1 1.366 13.941 1 69.57 ? C16 93J 401 B 1 HETATM 27 C C18 93J . . . H 2 3.088 -6.114 12.48 1 57.71 ? C18 93J 401 B 1 HETATM 28 N N04 93J . . . H 2 2.587 -7.15 12.409 1 45.71 ? N04 93J 401 B 1 HETATM 29 N N05 93J . . . H 2 5.557 -5.394 10.968 1 49.39 ? N05 93J 401 B 1 HETATM 30 C C19 93J . . . H 2 4.914 -6.345 10.183 1 48.99 ? C19 93J 401 B 1 HETATM 31 C C23 93J . . . H 2 4.904 -8.619 9.192 1 49.79 ? C23 93J 401 B 1 HETATM 32 F F01 93J . . . H 2 2.999 -9.35 8 1 53.2 ? F01 93J 401 B 1 HETATM 33 CL CL1 93J . . . H 2 1.403 -6.926 8.324 1 62.05 ? CL1 93J 401 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #